Non-Coding RNA Search

Ss1.1-Pig1-24L20.5

Sequence:


               
               GCCACGCGTCCGGCAGAATCCAAATATCCAGGTCACCATAGAGGTGGTGGACGGTCCTGA
ATCTGAAGCAGATAAAGATCAGCATCCGGAGAATAAGCCCAGCTGGTCAGTCCCATCCCC
TGACTGGCGGGCCTGGTGGCAGAGGTCCTTGTCCTTGGCAAGAGCCAACAGCGGGGACCA
GGACTACAAGTACGACAGTACCTCAGATGACAGCAACTTCCTCAACCCCCCCGGGGGCTG
GGACCATCCGGCCCCAGGCCACCGGACTTTCGAAACCAAAGAGCAGCCAGAATATGGTGA
GTTGACCACCCAGTGATATAAAGTTGGTGGGGAGAATAAATGAGGATGAGAAGGCCCATT
GGACATGGAGCCAACCAAAACCCAGTTTACAGGGGGTGGTTTGGGGTCTTTTGACAAGGG
GTACCTCTGTAAAAACTCCTATTCCCAGGGAGCCCCAAAAAAGGGGAG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCACGCGTCCGGCAGAATCCAAATATCCAGGTCACCATAGAGGTGGTGGACGGTCCTGA
ATCTGAAGCAGATAAAGATCAGCATCCGGAGAATAAGCCCAGCTGGTCAGTCCCATCCCC
TGACTGGCGGGCCTGGTGGCAGAGGTCCTTGTCCTTGGCAAGAGCCAACAGCGGGGACCA
GGACTACAAGTACGACAGTACCTCAGATGACAGCAACTTCCTCAACCCCCCCGGGGGCTG
GGACCATCCGGCCCCAGGCCACCGGACTTTCGAAACCAAAGAGCAGCCAGAATATGGTGA
GTTGACCACCCAGTGATATAAAGTTGGTGGGGAGAATAAATGAGGATGAGAAGGCCCATT
GGACATGGAGCCAACCAAAACCCAGTTTACAGGGGGTGGTTTGGGGTCTTTTGACAAGGG
GTACCTCTGTAAAAACTCCTATTCCCAGGGAGCCCCAAAAAAGGGGAG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               68-187, + strand, RNAz p=0.698338

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               68-187, + strand, RNAz p=0.698338

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               29-438, gnl|bosTau2|chr13 (3224034-3223628)
               

               
               29-438, gnl|Hg17|chr20 (13208278-13208680)
               

               
               29-438, gnl|Mm7|chr2 (139480989-139481394)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-438, gnl|bosTau2|chr13 (3224034-3223628)
               

               
               29-438, gnl|Hg17|chr20 (13208278-13208680)
               

               
               29-438, gnl|Mm7|chr2 (139480989-139481394)

	29-438, gnl\|bosTau2\|chr13 (3224034-3223628)
	29-438, gnl\|Hg17\|chr20 (13208278-13208680)
	29-438, gnl\|Mm7\|chr2 (139480989-139481394)