Ss1.1-Pig1-29N21.5
|
GATGGCAGCCAGCTGGAGCCCCTGCACTTCCTGCAGTGCCACAGCAAGAACAACAGCCCC
CGGGACCTGGAGACCCAGCTCTGGGCTTGCGCCTTCGAGCCGGCCTGGGACGAGGGGCAC
GCAGGGGCCACATCCCAGACGGTGGCCACGTGTGGCGGGGAGGCTGTGTGTGTGATCGAC
TGCCAGACGGGCATTGTGCTGCACAAGTACAAGTCGCCCGGCGAGGAGTTCTTCTCGGTG
GCCTGGACGGCCTTGACGGTGGTCACACAGGCAGGCCACAAGAAGCGCTGGAGCGTGCTG
GCAGCTGCAGGCCTGCGGGGCCTGGTCCGGCTGCTGCACGTGCGTGCCGGCTTCTGCTGC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GATGGCAGCCAGCTGGAGCCCCTGCACTTCCTGCAGTGCCACAGCAAGAACAACAGCCCC
CGGGACCTGGAGACCCAGCTCTGGGCTTGCGCCTTCGAGCCGGCCTGGGACGAGGGGCAC
GCAGGGGCCACATCCCAGACGGTGGCCACGTGTGGCGGGGAGGCTGTGTGTGTGATCGAC
TGCCAGACGGGCATTGTGCTGCACAAGTACAAGTCGCCCGGCGAGGAGTTCTTCTCGGTG
GCCTGGACGGCCTTGACGGTGGTCACACAGGCAGGCCACAAGAAGCGCTGGAGCGTGCTG
GCAGCTGCAGGCCTGCGGGGCCTGGTCCGGCTGCTGCACGTGCGTGCCGGCTTCTGCTGC |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
281-355, + strand, RNAmicro p=0.960061 |
PigEST conread start position and end position of the predicted microRNA,
PigEST conread reading direction of prediction,
miRNA classificator p of RNAmicro
|
281-355, + strand, RNAmicro p=0.960061 |
|
10-116, gnl|bosTau2|chr25 (31105878-31105984) |
|
10-116, gnl|canFam2|chr6 (10715433-10715316) |
|
10-116, gnl|danRer3|chr5 (67462423-67462312) |
|
10-116, gnl|dasNov1|scaffold_38395 (11844-11733) |
|
10-116, gnl|echTel1|scaffold_317793 (4719-4834) |
|
10-116, gnl|fr1|chrUn (7811148-7811054) |
|
10-116, gnl|galGal2|chr19 (3902227-3902341) |
|
10-116, gnl|hg17|chr7 (101702437-101702548) |
|
10-116, gnl|Hg17|chr7 (101702439-101702545) |
|
10-116, gnl|loxAfr1|scaffold_121821 (33995-33884) |
|
10-116, gnl|mm7|chr5 (135103501-135103390) |
|
10-116, gnl|Mm7|chr5 (135103497-135103391) |
|
10-116, gnl|monDom2|scaffold_77 (4445493-4445616) |
|
10-116, gnl|oryCun1|scaffold_133571 (5237-5348) |
|
10-116, gnl|panTro1|chr6_random (31117253-31117142) |
|
10-116, gnl|rheMac2|chr3 (49741064-49741175) |
|
10-116, gnl|rn3|chr12 (21639562-21639673) |
|
10-116, gnl|tetNig1|chrUn_random (29368089-29368184) |
| |
|
217-359, gnl|bosTau2|chr25 (31106428-31106570) |
|
217-359, gnl|Hg17|chr7 (101703013-101703155) |
|
217-359, gnl|Mm7|chr5 (135102470-135102328) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
10-116, gnl|bosTau2|chr25 (31105878-31105984) |
|
10-116, gnl|canFam2|chr6 (10715433-10715316) |
|
10-116, gnl|danRer3|chr5 (67462423-67462312) |
|
10-116, gnl|dasNov1|scaffold_38395 (11844-11733) |
|
10-116, gnl|echTel1|scaffold_317793 (4719-4834) |
|
10-116, gnl|fr1|chrUn (7811148-7811054) |
|
10-116, gnl|galGal2|chr19 (3902227-3902341) |
|
10-116, gnl|hg17|chr7 (101702437-101702548) |
|
10-116, gnl|Hg17|chr7 (101702439-101702545) |
|
10-116, gnl|loxAfr1|scaffold_121821 (33995-33884) |
|
10-116, gnl|mm7|chr5 (135103501-135103390) |
|
10-116, gnl|Mm7|chr5 (135103497-135103391) |
|
10-116, gnl|monDom2|scaffold_77 (4445493-4445616) |
|
10-116, gnl|oryCun1|scaffold_133571 (5237-5348) |
|
10-116, gnl|panTro1|chr6_random (31117253-31117142) |
|
10-116, gnl|rheMac2|chr3 (49741064-49741175) |
|
10-116, gnl|rn3|chr12 (21639562-21639673) |
|
10-116, gnl|tetNig1|chrUn_random (29368089-29368184) |
| |
|
217-359, gnl|bosTau2|chr25 (31106428-31106570) |
|
217-359, gnl|Hg17|chr7 (101703013-101703155) |
|
217-359, gnl|Mm7|chr5 (135102470-135102328) |
