Ss1.1-Pig1-2J15.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TGGCCGGCTACACGGCCCGGGTCCATGAGATGTTCCAGGTATTTGAGGACGTCCAGCACT GCCGGTTCAAGAGGCCCGGGGAGCCGGAGGACGCTCAGGCAGGCTCGGGGGCCGTGGTGA GGTCAGGTGTCCGTGTGGAGGGCCCGCTGCAGATCCGAGGCCAAGTGGTGGACGTGGAGC ACGGGATAGTCTGCGAGAACATCCCCATCATCACGCCCGCGGGGGAGGTGGTGGTGGCCA GCCTCAACATCCGGGTCGAGGAGGGCATGCACCTGCTCATCACGGGCCCCAACGGCTGCG GCAAGAGCTCCCTGTTCCGCATCCTGGGCGGCCTGTGGCCCACGTACGGCGGCGTGCTCT ACAAGCCCCCGCCTGAGCGCATGTTCTACATCCCGCAGAGGCCCTACATGCCCGTGGGCT CCTTGCGCGACCAGGTGATCTACCCGGACTCGGTGGAGGACATGCGAAGGAAGGGCTACT CGGAGCAGCACCTGGAAGCCATTCTGGACATCGTGCACCTAAACCACATCCTGCAGAGGG AAGGAGGTTGGGAGGCCGTGTGTGACTGGAAGGACGTGCTGTCGGGGGGCGAGAAGCAGA GAGTCGGCATGGCCCGGATGTTCTACCACAGGCCCAAGTATGCCCTCCTGGATGAATGTA CCAGCGCCGTGAGCATCGATGTGGAGGGCAAGATCTTCCAGGCGGCCAAGGATGCAGGCA TCGCCCTGCTTTCCATCACCCACCGCCCCTCCCTGTGGAAGTACCACACACACTTGCTCC AGTTCGACGGGGAGGGTGGCTGGAAGTTCGAGAAGCTGGACTCGGCCGCCCGCCTGAGCC TGACCGAGGAGAAGCAGCGGCTGGAGCAGCAGCTGGCGGGCATCCCCAAGATGCAGCGGC GCCTCCAGGAGCTCTGCCAGATCCTGGGCCAAGGCCCGGGTGTCCCCCACGGTGCCGCCA CCTGACCCAAGGCCTTGGCTCTTCGCCCTTGGCCCCCGCCCCACCGCGAGCCCTCGGATC ACATGAAGGAAGTGGCGCCCCTGCGCACCCAGCCCCCCCCCCGCGCCCTGCACGCGCGCC CTGCCCCCCTTCCTGTTCCTCAGGGAGGGGAGCGGGGTCAGAGGCGAACCCCAGGTCACA CCATGGGTCTGGGCCAGTGCCCTCCTGCGGCTGAGGGCCCTTTACTCCCCCTTCAGTCCC TGGGAGACATCACGGGCCGGTGTGTCCCTCCGCTGCCATTGTCCAGGTGGGCCACCGAGG CTTCTGTCCCATGGGGCGCCCTTCCTGCCCTAAAAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TGGCCGGCTACACGGCCCGGGTCCATGAGATGTTCCAGGTATTTGAGGACGTCCAGCACT GCCGGTTCAAGAGGCCCGGGGAGCCGGAGGACGCTCAGGCAGGCTCGGGGGCCGTGGTGA GGTCAGGTGTCCGTGTGGAGGGCCCGCTGCAGATCCGAGGCCAAGTGGTGGACGTGGAGC ACGGGATAGTCTGCGAGAACATCCCCATCATCACGCCCGCGGGGGAGGTGGTGGTGGCCA GCCTCAACATCCGGGTCGAGGAGGGCATGCACCTGCTCATCACGGGCCCCAACGGCTGCG GCAAGAGCTCCCTGTTCCGCATCCTGGGCGGCCTGTGGCCCACGTACGGCGGCGTGCTCT ACAAGCCCCCGCCTGAGCGCATGTTCTACATCCCGCAGAGGCCCTACATGCCCGTGGGCT CCTTGCGCGACCAGGTGATCTACCCGGACTCGGTGGAGGACATGCGAAGGAAGGGCTACT CGGAGCAGCACCTGGAAGCCATTCTGGACATCGTGCACCTAAACCACATCCTGCAGAGGG AAGGAGGTTGGGAGGCCGTGTGTGACTGGAAGGACGTGCTGTCGGGGGGCGAGAAGCAGA GAGTCGGCATGGCCCGGATGTTCTACCACAGGCCCAAGTATGCCCTCCTGGATGAATGTA CCAGCGCCGTGAGCATCGATGTGGAGGGCAAGATCTTCCAGGCGGCCAAGGATGCAGGCA TCGCCCTGCTTTCCATCACCCACCGCCCCTCCCTGTGGAAGTACCACACACACTTGCTCC AGTTCGACGGGGAGGGTGGCTGGAAGTTCGAGAAGCTGGACTCGGCCGCCCGCCTGAGCC TGACCGAGGAGAAGCAGCGGCTGGAGCAGCAGCTGGCGGGCATCCCCAAGATGCAGCGGC GCCTCCAGGAGCTCTGCCAGATCCTGGGCCAAGGCCCGGGTGTCCCCCACGGTGCCGCCA CCTGACCCAAGGCCTTGGCTCTTCGCCCTTGGCCCCCGCCCCACCGCGAGCCCTCGGATC ACATGAAGGAAGTGGCGCCCCTGCGCACCCAGCCCCCCCCCCGCGCCCTGCACGCGCGCC CTGCCCCCCTTCCTGTTCCTCAGGGAGGGGAGCGGGGTCAGAGGCGAACCCCAGGTCACA CCATGGGTCTGGGCCAGTGCCCTCCTGCGGCTGAGGGCCCTTTACTCCCCCTTCAGTCCC TGGGAGACATCACGGGCCGGTGTGTCCCTCCGCTGCCATTGTCCAGGTGGGCCACCGAGG CTTCTGTCCCATGGGGCGCCCTTCCTGCCCTAAAAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 776-895, + strand, RNAz p=0.729418 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 776-895, + strand, RNAz p=0.729418 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-160, gnl|bosTau2|chrX (13536369-13536210) | |
| 1-160, gnl|Hg17|chrX (152522656-152522815) | |
| 1-160, gnl|Mm7|chrX (69115868-69116027) | |
| 254-401, gnl|bosTau2|chrX (13534089-13533942) | |
| 254-401, gnl|canFam2|chrX (124602758-124602920) | |
| 254-401, gnl|danRer3|chr8 (1677452-1677602) | |
| 254-401, gnl|dasNov1|scaffold_81966 (9789-9628) | |
| 254-401, gnl|echTel1|scaffold_255346 (5121-5271) | |
| 254-401, gnl|fr1|chrUn (193246106-193245944) | |
| 254-401, gnl|hg17|chrX (152526380-152526542) | |
| 254-401, gnl|Hg17|chrX (152526392-152526539) | |
| 254-401, gnl|loxAfr1|scaffold_37640 (10488-10641) | |
| 254-401, gnl|mm7|chrX (69120645-69120807) | |
| 254-401, gnl|Mm7|chrX (69120657-69120804) | |
| 254-401, gnl|monDom2|scaffold_178 (1226809-1226975) | |
| 254-401, gnl|oryCun1|scaffold_213385 (1438-1293) | |
| 254-401, gnl|panTro1|chrX (157811953-157812115) | |
| 254-401, gnl|rheMac2|chrX (151853587-151853749) | |
| 254-401, gnl|rn3|chrX (159706661-159706823) | |
| 254-401, gnl|tetNig1|chrUn_random (30661163-30661006) | |
| 254-401, gnl|xenTro1|scaffold_82 (1333803-1333961) | |
| 704-1073, gnl|bosTau2|chrX (13530726-13530339) | |
| 704-1073, gnl|Hg17|chrX (152529690-152530161) | |
| 704-1073, gnl|Mm7|chrX (69123898-69124261) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-160, gnl|bosTau2|chrX (13536369-13536210) | |
| 1-160, gnl|Hg17|chrX (152522656-152522815) | |
| 1-160, gnl|Mm7|chrX (69115868-69116027) | |
| 254-401, gnl|bosTau2|chrX (13534089-13533942) | |
| 254-401, gnl|canFam2|chrX (124602758-124602920) | |
| 254-401, gnl|danRer3|chr8 (1677452-1677602) | |
| 254-401, gnl|dasNov1|scaffold_81966 (9789-9628) | |
| 254-401, gnl|echTel1|scaffold_255346 (5121-5271) | |
| 254-401, gnl|fr1|chrUn (193246106-193245944) | |
| 254-401, gnl|hg17|chrX (152526380-152526542) | |
| 254-401, gnl|Hg17|chrX (152526392-152526539) | |
| 254-401, gnl|loxAfr1|scaffold_37640 (10488-10641) | |
| 254-401, gnl|mm7|chrX (69120645-69120807) | |
| 254-401, gnl|Mm7|chrX (69120657-69120804) | |
| 254-401, gnl|monDom2|scaffold_178 (1226809-1226975) | |
| 254-401, gnl|oryCun1|scaffold_213385 (1438-1293) | |
| 254-401, gnl|panTro1|chrX (157811953-157812115) | |
| 254-401, gnl|rheMac2|chrX (151853587-151853749) | |
| 254-401, gnl|rn3|chrX (159706661-159706823) | |
| 254-401, gnl|tetNig1|chrUn_random (30661163-30661006) | |
| 254-401, gnl|xenTro1|scaffold_82 (1333803-1333961) | |
| 704-1073, gnl|bosTau2|chrX (13530726-13530339) | |
| 704-1073, gnl|Hg17|chrX (152529690-152530161) | |
| 704-1073, gnl|Mm7|chrX (69123898-69124261) |