Non-Coding RNA Search

Ss1.1-Pig1-35B13.5

Sequence:


               
               AAGCTGATGTTCAGCTGCAGCCTCCCACCGCCAAGAGACCGTCTTTCCCCCATGTCCTGA
GGCATTTCCTCAGGGTCTTTCTCAAGGTCTCCTCTCTACAAAGCACAACATTAATGTATG
TTTGGTTAGACCTCAGTTCTAGTGCCCCTATTTATTTAGTAAGAATACTCACATCCTGGC
TGCTTTTTGTTGGTCATCTCTGTAGAGTCATCATCTGTTTCTGTCTTCCTGTGCCCCTTG
TCCTTTTATACCCATCTGAAGAGGTAACGATCGTGAATCTTACTCCCCTTATTCTTTTTG
GTTTGTGAAGAAGGACCGTGTTGAGGGCCCACCGCCAGCCATGGGGACATTTGTGTAAAT
ACGTCTCTCTGTAATTGCCACACTGCAGCTGAACATCAGCTTTGCCATACTGACGTCAAT
CATCCAAGAGAAATTATTTCAGATTTTATTTTTGTATCTGTGGTAACAAAGCAGTAACAA
AAGATTTTCTGTTTGGAAGCCCCTCCCCACCGCTGACCACCTCCCACCCCCCACCCACCA
AGCTGTTTTGCTCACATTAACAGATTAAAGTGCCTGAAGCATAATTCCTTCTTTACCTGT
GTACTAAAAGCCCCGTTGTATTGATTTTTTTATAATAAGCCTTTTTACCTCTGTGTAAAA
AATATATATACAAGTGTATGATGTACATTTTAGTTCTTAACCTTTTTTTATGGTTTCTAA
TATGTATGACCAATGTAGCCATTGCTTTACAATGTACCATGTAAATATAAATACATCCTA
TCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGTTTTTTTTTTTTTCTGGGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAGCTGATGTTCAGCTGCAGCCTCCCACCGCCAAGAGACCGTCTTTCCCCCATGTCCTGA
GGCATTTCCTCAGGGTCTTTCTCAAGGTCTCCTCTCTACAAAGCACAACATTAATGTATG
TTTGGTTAGACCTCAGTTCTAGTGCCCCTATTTATTTAGTAAGAATACTCACATCCTGGC
TGCTTTTTGTTGGTCATCTCTGTAGAGTCATCATCTGTTTCTGTCTTCCTGTGCCCCTTG
TCCTTTTATACCCATCTGAAGAGGTAACGATCGTGAATCTTACTCCCCTTATTCTTTTTG
GTTTGTGAAGAAGGACCGTGTTGAGGGCCCACCGCCAGCCATGGGGACATTTGTGTAAAT
ACGTCTCTCTGTAATTGCCACACTGCAGCTGAACATCAGCTTTGCCATACTGACGTCAAT
CATCCAAGAGAAATTATTTCAGATTTTATTTTTGTATCTGTGGTAACAAAGCAGTAACAA
AAGATTTTCTGTTTGGAAGCCCCTCCCCACCGCTGACCACCTCCCACCCCCCACCCACCA
AGCTGTTTTGCTCACATTAACAGATTAAAGTGCCTGAAGCATAATTCCTTCTTTACCTGT
GTACTAAAAGCCCCGTTGTATTGATTTTTTTATAATAAGCCTTTTTACCTCTGTGTAAAA
AATATATATACAAGTGTATGATGTACATTTTAGTTCTTAACCTTTTTTTATGGTTTCTAA
TATGTATGACCAATGTAGCCATTGCTTTACAATGTACCATGTAAATATAAATACATCCTA
TCAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAGGGGGGGGGGGGGGTTTTTTTTTTTTTCTGGGG

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               47-511, gnl|bosTau2|chr11 (45661148-45660668)
               

               
               47-511, gnl|Hg17|chr2 (65450358-65449885)
               

               
               47-511, gnl|Mm7|chr11 (19975354-19975792)
               


               
               529-785, gnl|bosTau2|chr11 (45660669-45660413)
               

               
               529-785, gnl|Hg17|chr2 (65449886-65449636)
               

               
               529-785, gnl|Mm7|chr11 (19975791-19976035)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               47-511, gnl|bosTau2|chr11 (45661148-45660668)
               

               
               47-511, gnl|Hg17|chr2 (65450358-65449885)
               

               
               47-511, gnl|Mm7|chr11 (19975354-19975792)
               


               
               529-785, gnl|bosTau2|chr11 (45660669-45660413)
               

               
               529-785, gnl|Hg17|chr2 (65449886-65449636)
               

               
               529-785, gnl|Mm7|chr11 (19975791-19976035)

	47-511, gnl\|bosTau2\|chr11 (45661148-45660668)
	47-511, gnl\|Hg17\|chr2 (65450358-65449885)
	47-511, gnl\|Mm7\|chr11 (19975354-19975792)

	529-785, gnl\|bosTau2\|chr11 (45660669-45660413)
	529-785, gnl\|Hg17\|chr2 (65449886-65449636)
	529-785, gnl\|Mm7\|chr11 (19975791-19976035)