Ss1.1-Pig1-37E17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGACATCGTGGACGCTGCTCGAAGCGCCGGGTCCCAGTGTACATCATCCTGGATGAGGCA GGTGTGAAGTATTTCCTGGCAGATGTGTCAGGACCTGGAGCTCGCAGACTTCCGTATTCG GAACATCCGTGTGCGCTCTGTGACAGGTGTTGGCTTCTACATGCCCATGGGGAGGATCAA GGGGACCCTGTCATCCAAGTTCCTAATGGTAGATGGTGACAAAGTAGCCACCGGATCCTA CAGCTTCACCTGGAGTTCCTCCCACGTGAATAGGAACCTCCTGCTTCTCCTGACGGGGCA GAACGTGGAGCCCTTTGATGTGGAGTTCCGGGAGCTGTACGCCATCTCCGAGGAGGTGAA CTTGTACCAGAAGCTGGGCCTGGCGGGAGGCGCCGGCAGGCTCGGCCTCAACTACTCCTC CACCGTGGCTCGCAAGCTCATCAACCCCAAGTACGCCCTGGTGGCAGCCAGCCGCCAGCC CCCGGGAGAAATGATGCGCTCGGCTGCCCGGCAGCAGCGAGAGGTCTGCAGCCACCCAGA GGGGCAAGAGGAGGGCGGCAGGGGCAGCGAGTCAGCCCGGCGCCTGGAGAACTTCCTGCA CGACCTGGTCACACTGCAGCAGGTGCTGCCCCCCGTGGAACCCGTGCCCTCGGGAGAGCT GACGAGGAAGGACAGCAGGGGGGTCTGCCACCTGCGCGCGGACCCAAAGCCCAAAGCCCC AGAGGCACTCGCCCGACATGGCAAGGGAGAAGCTGCCAACGGGGAGGCCACCCCGGCCAA GGAGGGCAGGCGCTTCAGCAGCAGGTTCTTCAGCCGACGGTCCAAGAAGACCGCAGCCCC CAACGGCACGGCCAGCGCCCTGCCCGCCGAGACCTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGACATCGTGGACGCTGCTCGAAGCGCCGGGTCCCAGTGTACATCATCCTGGATGAGGCA GGTGTGAAGTATTTCCTGGCAGATGTGTCAGGACCTGGAGCTCGCAGACTTCCGTATTCG GAACATCCGTGTGCGCTCTGTGACAGGTGTTGGCTTCTACATGCCCATGGGGAGGATCAA GGGGACCCTGTCATCCAAGTTCCTAATGGTAGATGGTGACAAAGTAGCCACCGGATCCTA CAGCTTCACCTGGAGTTCCTCCCACGTGAATAGGAACCTCCTGCTTCTCCTGACGGGGCA GAACGTGGAGCCCTTTGATGTGGAGTTCCGGGAGCTGTACGCCATCTCCGAGGAGGTGAA CTTGTACCAGAAGCTGGGCCTGGCGGGAGGCGCCGGCAGGCTCGGCCTCAACTACTCCTC CACCGTGGCTCGCAAGCTCATCAACCCCAAGTACGCCCTGGTGGCAGCCAGCCGCCAGCC CCCGGGAGAAATGATGCGCTCGGCTGCCCGGCAGCAGCGAGAGGTCTGCAGCCACCCAGA GGGGCAAGAGGAGGGCGGCAGGGGCAGCGAGTCAGCCCGGCGCCTGGAGAACTTCCTGCA CGACCTGGTCACACTGCAGCAGGTGCTGCCCCCCGTGGAACCCGTGCCCTCGGGAGAGCT GACGAGGAAGGACAGCAGGGGGGTCTGCCACCTGCGCGCGGACCCAAAGCCCAAAGCCCC AGAGGCACTCGCCCGACATGGCAAGGGAGAAGCTGCCAACGGGGAGGCCACCCCGGCCAA GGAGGGCAGGCGCTTCAGCAGCAGGTTCTTCAGCCGACGGTCCAAGAAGACCGCAGCCCC CAACGGCACGGCCAGCGCCCTGCCCGCCGAGACCTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 721-840, - strand, RNAz p=0.929432 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 721-840, - strand, RNAz p=0.929432 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 1-121, gnl|bosTau2|chr5 (68123479-68123359) | |
| 1-121, gnl|canFam2|chr10 (28185606-28185446) | |
| 1-121, gnl|danRer3|chr3 (38242099-38242259) | |
| 1-121, gnl|dasNov1|scaffold_1594 (166682-166842) | |
| 1-121, gnl|echTel1|scaffold_289634 (55995-55840) | |
| 1-121, gnl|fr1|chrUn (259648236-259648387) | |
| 1-121, gnl|galGal2|chr1 (46990542-46990382) | |
| 1-121, gnl|hg17|chr22 (38739652-38739812) | |
| 1-121, gnl|Hg17|chr22 (38739719-38739839) | |
| 1-121, gnl|loxAfr1|scaffold_215692 (640-478) | |
| 1-121, gnl|mm7|chr15 (80774379-80774538) | |
| 1-121, gnl|Mm7|chr15 (80774445-80774565) | |
| 1-121, gnl|monDom2|scaffold_133 (1047191-1047032) | |
| 1-121, gnl|oryCun1|scaffold_206423 (45544-45386) | |
| 1-121, gnl|panTro1|chr23 (38990969-38991129) | |
| 1-121, gnl|rheMac2|chr10 (83952001-83952161) | |
| 1-121, gnl|rn3|chr7 (119003623-119003782) | |
| 1-121, gnl|tetNig1|chr3 (14588106-14587946) | |
| 1-121, gnl|xenTro1|scaffold_246 (2913-3057) | |
| 242-876, gnl|bosTau2|chr5 (68121886-68121255) | |
| 242-876, gnl|Hg17|chr22 (38741792-38742407) | |
| 242-876, gnl|Mm7|chr15 (80776390-80777015) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-121, gnl|bosTau2|chr5 (68123479-68123359) | |
| 1-121, gnl|canFam2|chr10 (28185606-28185446) | |
| 1-121, gnl|danRer3|chr3 (38242099-38242259) | |
| 1-121, gnl|dasNov1|scaffold_1594 (166682-166842) | |
| 1-121, gnl|echTel1|scaffold_289634 (55995-55840) | |
| 1-121, gnl|fr1|chrUn (259648236-259648387) | |
| 1-121, gnl|galGal2|chr1 (46990542-46990382) | |
| 1-121, gnl|hg17|chr22 (38739652-38739812) | |
| 1-121, gnl|Hg17|chr22 (38739719-38739839) | |
| 1-121, gnl|loxAfr1|scaffold_215692 (640-478) | |
| 1-121, gnl|mm7|chr15 (80774379-80774538) | |
| 1-121, gnl|Mm7|chr15 (80774445-80774565) | |
| 1-121, gnl|monDom2|scaffold_133 (1047191-1047032) | |
| 1-121, gnl|oryCun1|scaffold_206423 (45544-45386) | |
| 1-121, gnl|panTro1|chr23 (38990969-38991129) | |
| 1-121, gnl|rheMac2|chr10 (83952001-83952161) | |
| 1-121, gnl|rn3|chr7 (119003623-119003782) | |
| 1-121, gnl|tetNig1|chr3 (14588106-14587946) | |
| 1-121, gnl|xenTro1|scaffold_246 (2913-3057) | |
| 242-876, gnl|bosTau2|chr5 (68121886-68121255) | |
| 242-876, gnl|Hg17|chr22 (38741792-38742407) | |
| 242-876, gnl|Mm7|chr15 (80776390-80777015) |