Ss1.1-Pig1-38I02.5
|
ATCTACTTCTGTCTGCAGGAGATGGCTCAAGAGAAAGATTGTCATGGGATCATCGAGGAT
GTCGTCCTGCTCGGTGCGCCCGTGGAAGGAGAAGCCAAGCACTGGGAGCCTTTCCGGAAG
GTGGTATCTGGAAGAATCATCAATGGCTACTGCAGGGGGGACTGGCTACTGAGCTTCGTG
TACCGCACGTCCTCCGTGCAGCTCCGCGTGGCCGGCCTGCAGCCTGTGCTGCTGGACAGG
AGGGTGGAGAACGTGGACCTGTCCTCCGTGGTCAGCGGCCACTTGGACTACGCCAAGCAG
ATGGACGTCATCCTGAAGGCCGTGGGCATCCGCACCAAGCCAGCCTGGGACGAGAAGGGA
CTCTCGCTGGCCCCAGGCAGCCTGTCCCAAGAGAAGCCTCACCAGGCAGCAGCCACCTCC
TTATCAGATAAGACCACCAACCAGGATGGACAAACCCAGGGTCCTACACCGGGAGACACC
CCCAAAGCAGCCACATCCCCTGACCCCAGCCAAGCTCAAGTGTCAGAAGGTCTGGACGAG
TCTGAAGGGGCCTCCCTTCCTGCTGCTGCCAGCCCCACTGAGAGGCCCCATACCTGCAGC
CATGGCATGGGCCCCAACCCCCTGGGCTGCCCTGACTGTGCCAGTGAGACCCAGGAGCCC
TGTCCAGGGCTGGACTGACCCCAGAAGAGTCACTGTCCCAGATTCTACATGCAGCACTCT
CTTACCCCACTCTGCCGGGCTCCTCATGTGAGCTCTGGAGATGCACAGTGTTGGCCAGTG
CCTTTCCTTAATTGGAGAGACTGGTATTGGAAGGAGGGGGAGTTATTAGAAGACACTGTC
CCCTCCCTGAGGAAGCGAGGCCAGAGCTGTGCAGAGAACCAAACCCCGGGCCTCCTGAAC
TTTGGGTCAGAGCTGTGGGGTCTGGTTGCCCATAAGGAGGCCCAGGGGCTCTCTGGAGCC
TGAGGCCCCCACCCTGCCACACCCCCCAGCCTCAGATGTCTGCTCTTCCATCCACTCTCC
AGGGCTGCTCACCAGCCCACAGGCCCCACTGATGCACCTAAAGAGCAGGTACAGGTGGGG
AGCGAGCAGCTTATTCCCTGCTCTTAGGAGGCCAGTGAGATCTACCACGTACAGCTGTGC
AGGCTGTGCACTGCCCAACTACAA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
ATCTACTTCTGTCTGCAGGAGATGGCTCAAGAGAAAGATTGTCATGGGATCATCGAGGAT
GTCGTCCTGCTCGGTGCGCCCGTGGAAGGAGAAGCCAAGCACTGGGAGCCTTTCCGGAAG
GTGGTATCTGGAAGAATCATCAATGGCTACTGCAGGGGGGACTGGCTACTGAGCTTCGTG
TACCGCACGTCCTCCGTGCAGCTCCGCGTGGCCGGCCTGCAGCCTGTGCTGCTGGACAGG
AGGGTGGAGAACGTGGACCTGTCCTCCGTGGTCAGCGGCCACTTGGACTACGCCAAGCAG
ATGGACGTCATCCTGAAGGCCGTGGGCATCCGCACCAAGCCAGCCTGGGACGAGAAGGGA
CTCTCGCTGGCCCCAGGCAGCCTGTCCCAAGAGAAGCCTCACCAGGCAGCAGCCACCTCC
TTATCAGATAAGACCACCAACCAGGATGGACAAACCCAGGGTCCTACACCGGGAGACACC
CCCAAAGCAGCCACATCCCCTGACCCCAGCCAAGCTCAAGTGTCAGAAGGTCTGGACGAG
TCTGAAGGGGCCTCCCTTCCTGCTGCTGCCAGCCCCACTGAGAGGCCCCATACCTGCAGC
CATGGCATGGGCCCCAACCCCCTGGGCTGCCCTGACTGTGCCAGTGAGACCCAGGAGCCC
TGTCCAGGGCTGGACTGACCCCAGAAGAGTCACTGTCCCAGATTCTACATGCAGCACTCT
CTTACCCCACTCTGCCGGGCTCCTCATGTGAGCTCTGGAGATGCACAGTGTTGGCCAGTG
CCTTTCCTTAATTGGAGAGACTGGTATTGGAAGGAGGGGGAGTTATTAGAAGACACTGTC
CCCTCCCTGAGGAAGCGAGGCCAGAGCTGTGCAGAGAACCAAACCCCGGGCCTCCTGAAC
TTTGGGTCAGAGCTGTGGGGTCTGGTTGCCCATAAGGAGGCCCAGGGGCTCTCTGGAGCC
TGAGGCCCCCACCCTGCCACACCCCCCAGCCTCAGATGTCTGCTCTTCCATCCACTCTCC
AGGGCTGCTCACCAGCCCACAGGCCCCACTGATGCACCTAAAGAGCAGGTACAGGTGGGG
AGCGAGCAGCTTATTCCCTGCTCTTAGGAGGCCAGTGAGATCTACCACGTACAGCTGTGC
AGGCTGTGCACTGCCCAACTACAA
|
|
gi|34534502|dbj|BAC87027.1| |
Protein identifier
|
gi|34534502|dbj|BAC87027.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
36-156, gnl|bosTau2|chr2 (61598790-61598670) |
|
36-156, gnl|canFam2|chr2 (81904086-81903964) |
|
36-156, gnl|echTel1|scaffold_321807 (640-762) |
|
36-156, gnl|hg17|chr1 (19772566-19772688) |
|
36-156, gnl|Hg17|chr1 (19772686-19772566) |
|
36-156, gnl|loxAfr1|scaffold_140035 (4337-4459) |
|
36-156, gnl|mm7|chr4 (138431062-138430940) |
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36-156, gnl|Mm7|chr4 (138430940-138431060) |
|
36-156, gnl|panTro1|chr1 (20067755-20067877) |
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36-156, gnl|rheMac2|chr1 (22352387-22352509) |
|
36-156, gnl|rn3|chr5_random (1674201-1674079) |
|
36-156, gnl|tetNig1|chrUn_random (27642606-27642484) |
| |
|
270-1163, gnl|bosTau2|chr2 (61582326-61581408) |
|
270-1163, gnl|Hg17|chr1 (19755244-19754248) |
|
270-1163, gnl|Mm7|chr4 (138436552-138437429) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
36-156, gnl|bosTau2|chr2 (61598790-61598670) |
|
36-156, gnl|canFam2|chr2 (81904086-81903964) |
|
36-156, gnl|echTel1|scaffold_321807 (640-762) |
|
36-156, gnl|hg17|chr1 (19772566-19772688) |
|
36-156, gnl|Hg17|chr1 (19772686-19772566) |
|
36-156, gnl|loxAfr1|scaffold_140035 (4337-4459) |
|
36-156, gnl|mm7|chr4 (138431062-138430940) |
|
36-156, gnl|Mm7|chr4 (138430940-138431060) |
|
36-156, gnl|panTro1|chr1 (20067755-20067877) |
|
36-156, gnl|rheMac2|chr1 (22352387-22352509) |
|
36-156, gnl|rn3|chr5_random (1674201-1674079) |
|
36-156, gnl|tetNig1|chrUn_random (27642606-27642484) |
| |
|
270-1163, gnl|bosTau2|chr2 (61582326-61581408) |
|
270-1163, gnl|Hg17|chr1 (19755244-19754248) |
|
270-1163, gnl|Mm7|chr4 (138436552-138437429) |
