Ss1.1-Pig1-42F18.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGCAGTGGCCTGGTTGGAAGAAATCTCATAAGCGCGGAATGAAAGGGGACACCGTGAAT GTGCGGCGGAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGCCCCCTGGAAAATCATCC GCCCGGCATGTGGGATGCAAGTGGGAGAATCCACCTCACTGCCTGGAGATCACGCCACCG TCTTCAGAGAAGCTGGTCTCCGTGATGCGGTTAAGTGACCTCTCCACAGAAGATGAGGAC TCGGGTCACTGTAAAATGAACCGTTATGATAAGAAGATTGACAGTCTAATGAACGCGGTT GGTTGTCTCAAGTCTGAGGTCAAGATGCAGAAGGGAGAGCGCCAGATGGCCAAAAGGTTC CTGGAGGAACGCAAGCAGGAGCTGGAGGAGGTGGCCCACGAGCTGGCCGAGACCGAGCAC GAGAACACGGTGCTGAGACACAACATCGAGCGCATCAAGGAGGAGAAGGACTTCACTGTG CTTCAGAAGAAACACCTCCAGCAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGGAGGCG GAAATGGATGGGGCTGCCGCTGCCAAACAAGTCATGGCCCTGAAAGACACTATCGGGAAG CTCAAGACGGAGAAACAGATGACCTGCACGGATATCAACACCCTGACGAGGCAGAAGGAA CTTCTCCTGCAGAAGCTGAGCACGTTTGAGGAGACCAACCGCACCCTCCGAGACCTGCTG CGGGAACAGCACTGCAAAGAGGATTCCGAAAGGCTGATGGAGCAACAGGAGCCCCTACTG AAACGCTGGCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGCAGTGGCCTGGTTGGAAGAAATCTCATAAGCGCGGAATGAAAGGGGACACCGTGAAT GTGCGGCGGAGTGTCCGGGTGAAAACCAAGGTACCTTGGATGCCCCCTGGAAAATCATCC GCCCGGCATGTGGGATGCAAGTGGGAGAATCCACCTCACTGCCTGGAGATCACGCCACCG TCTTCAGAGAAGCTGGTCTCCGTGATGCGGTTAAGTGACCTCTCCACAGAAGATGAGGAC TCGGGTCACTGTAAAATGAACCGTTATGATAAGAAGATTGACAGTCTAATGAACGCGGTT GGTTGTCTCAAGTCTGAGGTCAAGATGCAGAAGGGAGAGCGCCAGATGGCCAAAAGGTTC CTGGAGGAACGCAAGCAGGAGCTGGAGGAGGTGGCCCACGAGCTGGCCGAGACCGAGCAC GAGAACACGGTGCTGAGACACAACATCGAGCGCATCAAGGAGGAGAAGGACTTCACTGTG CTTCAGAAGAAACACCTCCAGCAGGAGAAGGAGTGCCTCATGTCCAAGCTGGTGGAGGCG GAAATGGATGGGGCTGCCGCTGCCAAACAAGTCATGGCCCTGAAAGACACTATCGGGAAG CTCAAGACGGAGAAACAGATGACCTGCACGGATATCAACACCCTGACGAGGCAGAAGGAA CTTCTCCTGCAGAAGCTGAGCACGTTTGAGGAGACCAACCGCACCCTCCGAGACCTGCTG CGGGAACAGCACTGCAAAGAGGATTCCGAAAGGCTGATGGAGCAACAGGAGCCCCTACTG AAACGCTGGCGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 20-147, + strand, RNAz p=0.937117 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 20-147, + strand, RNAz p=0.937117 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 5' of BC091500, + |
| Aligned organism(s): 45 entry(ies) | More info |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
| 20-147, gnl|bosTau2|chr11 (78329595-78329722) | |
| 20-147, gnl|canFam2|chr9 (58435646-58435486) | |
| 20-147, gnl|dasNov1|scaffold_65797 (4862-5022) | |
| 20-147, gnl|echTel1|scaffold_303808 (36518-36678) | |
| 20-147, gnl|galGal2|chr17 (5639407-5639248) | |
| 20-147, gnl|hg17|chr9 (128302759-128302919) | |
| 20-147, gnl|Hg17|chr9 (128302773-128302900) | |
| 20-147, gnl|loxAfr1|scaffold_106272 (30416-30576) | |
| 20-147, gnl|mm7|chr2 (29900743-29900899) | |
| 20-147, gnl|Mm7|chr2 (29900753-29900880) | |
| 20-147, gnl|monDom2|scaffold_51 (3017503-3017649) | |
| 20-147, gnl|oryCun1|scaffold_184381 (7495-7655) | |
| 20-147, gnl|panTro1|chr11 (113135529-113135689) | |
| 20-147, gnl|rheMac2|chr15 (10406803-10406643) | |
| 20-147, gnl|rn3|chr3 (8880945-8881105) | |
| 317-476, gnl|bosTau2|chr11 (78334975-78335134) | |
| 317-476, gnl|canFam2|chr9 (58427735-58427553) | |
| 317-476, gnl|dasNov1|scaffold_65797 (9883-10082) | |
| 317-476, gnl|echTel1|scaffold_303808 (43217-43397) | |
| 317-476, gnl|galGal2|chr17 (5637375-5637181) | |
| 317-476, gnl|hg17|chr9 (128313133-128313321) | |
| 317-476, gnl|Hg17|chr9 (128313139-128313298) | |
| 317-476, gnl|loxAfr1|scaffold_131935 (981-792) | |
| 317-476, gnl|mm7|chr2 (29909484-29909661) | |
| 317-476, gnl|Mm7|chr2 (29909490-29909649) | |
| 317-476, gnl|monDom2|scaffold_51 (3020277-3020464) | |
| 317-476, gnl|oryCun1|scaffold_159051 (4947-5149) | |
| 317-476, gnl|panTro1|chr11 (113145690-113145878) | |
| 317-476, gnl|rheMac2|chr15 (10396697-10396509) | |
| 317-476, gnl|rn3|chr3 (8892488-8892665) | |
| 609-742, gnl|bosTau2|chr11 (78336535-78336668) | |
| 609-742, gnl|canFam2|chr9 (58426004-58425848) | |
| 609-742, gnl|dasNov1|scaffold_162237 (3316-3474) | |
| 609-742, gnl|echTel1|scaffold_303808 (44856-45013) | |
| 609-742, gnl|galGal2|chr17 (5635804-5635649) | |
| 609-742, gnl|hg17|chr9 (128315424-128315581) | |
| 609-742, gnl|Hg17|chr9 (128315442-128315575) | |
| 609-742, gnl|loxAfr1|scaffold_122167 (809-652) | |
| 609-742, gnl|mm7|chr2 (29911268-29911425) | |
| 609-742, gnl|Mm7|chr2 (29911286-29911419) | |
| 609-742, gnl|monDom2|scaffold_51 (3022093-3022254) | |
| 609-742, gnl|oryCun1|scaffold_159051 (6980-7137) | |
| 609-742, gnl|panTro1|chr11 (113148000-113148157) | |
| 609-742, gnl|rheMac2|chr15 (10394429-10394272) | |
| 609-742, gnl|rn3|chr3 (8894180-8894337) |
| Aligned organism(s): 45 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 20-147, gnl|bosTau2|chr11 (78329595-78329722) | |
| 20-147, gnl|canFam2|chr9 (58435646-58435486) | |
| 20-147, gnl|dasNov1|scaffold_65797 (4862-5022) | |
| 20-147, gnl|echTel1|scaffold_303808 (36518-36678) | |
| 20-147, gnl|galGal2|chr17 (5639407-5639248) | |
| 20-147, gnl|hg17|chr9 (128302759-128302919) | |
| 20-147, gnl|Hg17|chr9 (128302773-128302900) | |
| 20-147, gnl|loxAfr1|scaffold_106272 (30416-30576) | |
| 20-147, gnl|mm7|chr2 (29900743-29900899) | |
| 20-147, gnl|Mm7|chr2 (29900753-29900880) | |
| 20-147, gnl|monDom2|scaffold_51 (3017503-3017649) | |
| 20-147, gnl|oryCun1|scaffold_184381 (7495-7655) | |
| 20-147, gnl|panTro1|chr11 (113135529-113135689) | |
| 20-147, gnl|rheMac2|chr15 (10406803-10406643) | |
| 20-147, gnl|rn3|chr3 (8880945-8881105) | |
| 317-476, gnl|bosTau2|chr11 (78334975-78335134) | |
| 317-476, gnl|canFam2|chr9 (58427735-58427553) | |
| 317-476, gnl|dasNov1|scaffold_65797 (9883-10082) | |
| 317-476, gnl|echTel1|scaffold_303808 (43217-43397) | |
| 317-476, gnl|galGal2|chr17 (5637375-5637181) | |
| 317-476, gnl|hg17|chr9 (128313133-128313321) | |
| 317-476, gnl|Hg17|chr9 (128313139-128313298) | |
| 317-476, gnl|loxAfr1|scaffold_131935 (981-792) | |
| 317-476, gnl|mm7|chr2 (29909484-29909661) | |
| 317-476, gnl|Mm7|chr2 (29909490-29909649) | |
| 317-476, gnl|monDom2|scaffold_51 (3020277-3020464) | |
| 317-476, gnl|oryCun1|scaffold_159051 (4947-5149) | |
| 317-476, gnl|panTro1|chr11 (113145690-113145878) | |
| 317-476, gnl|rheMac2|chr15 (10396697-10396509) | |
| 317-476, gnl|rn3|chr3 (8892488-8892665) | |
| 609-742, gnl|bosTau2|chr11 (78336535-78336668) | |
| 609-742, gnl|canFam2|chr9 (58426004-58425848) | |
| 609-742, gnl|dasNov1|scaffold_162237 (3316-3474) | |
| 609-742, gnl|echTel1|scaffold_303808 (44856-45013) | |
| 609-742, gnl|galGal2|chr17 (5635804-5635649) | |
| 609-742, gnl|hg17|chr9 (128315424-128315581) | |
| 609-742, gnl|Hg17|chr9 (128315442-128315575) | |
| 609-742, gnl|loxAfr1|scaffold_122167 (809-652) | |
| 609-742, gnl|mm7|chr2 (29911268-29911425) | |
| 609-742, gnl|Mm7|chr2 (29911286-29911419) | |
| 609-742, gnl|monDom2|scaffold_51 (3022093-3022254) | |
| 609-742, gnl|oryCun1|scaffold_159051 (6980-7137) | |
| 609-742, gnl|panTro1|chr11 (113148000-113148157) | |
| 609-742, gnl|rheMac2|chr15 (10394429-10394272) | |
| 609-742, gnl|rn3|chr3 (8894180-8894337) |