Ss1.1-Pig1-44D13.5
|
GCAGTTATCCACCTAAATGCAACAGATGCTGACTCTGGAACTAATGCTGTGATCGCATAT
ACTGTACAGTCATCTGACAGTGACCTTTTTGTCATTGACCCCAACACAGGAGTCATCACC
ACGCAAGGCTTCTTGGATTTTGAAACCAAGCAGAGCTACCACCTTACTGTGAAAGCTTTC
AATGTCCCTGATGAAGAAAGGTGCAGTTTTGCCACTGTTAATATACAATTGAAAGGGACA
AATGAATATGTGCCTCGTTTTGTTTCCAAACTTTACTATTTTGAAATCTCAGAAGCAGCT
CCTAAAGGTACTATTGTTGGAGAAGTGTTTGCCAGTGACCGTGATTTGGGCACTGATGGG
GAGGTGCATTATTTACTTTTTGGTAACAGTAGAAAGAAGGGTTTCCAGATCAATAAGAAG
ACCGGACAAATTTATGTTTCTGGA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GCAGTTATCCACCTAAATGCAACAGATGCTGACTCTGGAACTAATGCTGTGATCGCATAT
ACTGTACAGTCATCTGACAGTGACCTTTTTGTCATTGACCCCAACACAGGAGTCATCACC
ACGCAAGGCTTCTTGGATTTTGAAACCAAGCAGAGCTACCACCTTACTGTGAAAGCTTTC
AATGTCCCTGATGAAGAAAGGTGCAGTTTTGCCACTGTTAATATACAATTGAAAGGGACA
AATGAATATGTGCCTCGTTTTGTTTCCAAACTTTACTATTTTGAAATCTCAGAAGCAGCT
CCTAAAGGTACTATTGTTGGAGAAGTGTTTGCCAGTGACCGTGATTTGGGCACTGATGGG
GAGGTGCATTATTTACTTTTTGGTAACAGTAGAAAGAAGGGTTTCCAGATCAATAAGAAG
ACCGGACAAATTTATGTTTCTGGA
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
2-444, gnl|bosTau2|chr20 (25488170-25487728) |
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2-444, gnl|canFam2|chr19 (18202602-18201621) |
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2-444, gnl|danRer3|chr23 (19501930-19500943) |
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2-444, gnl|dasNov1|scaffold_43726 (2351-1366) |
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2-444, gnl|echTel1|scaffold_240591 (3660-4641) |
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2-444, gnl|fr1|chrUn (27824200-27823220) |
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2-444, gnl|galGal2|chr4 (53074433-53073452) |
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2-444, gnl|hg17|chr4 (126728738-126729719) |
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2-444, gnl|Hg17|chr4 (126729411-126729853) |
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2-444, gnl|loxAfr1|scaffold_194 (74312-73331) |
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2-444, gnl|mm7|chr3 (38798348-38799329) |
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2-444, gnl|Mm7|chr3 (38799021-38799463) |
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2-444, gnl|monDom2|scaffold_32 (1555714-1554733) |
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2-444, gnl|oryCun1|scaffold_200176 (119628-120609) |
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2-444, gnl|panTro1|chr3 (143583601-143584582) |
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2-444, gnl|rheMac2|chr5 (117792005-117792986) |
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2-444, gnl|rn3|chr2 (125892024-125893005) |
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2-444, gnl|tetNig1|chr20 (2668372-2669353) |
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2-444, gnl|xenTro1|scaffold_426 (1039114-1038133) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
2-444, gnl|bosTau2|chr20 (25488170-25487728) |
|
2-444, gnl|canFam2|chr19 (18202602-18201621) |
|
2-444, gnl|danRer3|chr23 (19501930-19500943) |
|
2-444, gnl|dasNov1|scaffold_43726 (2351-1366) |
|
2-444, gnl|echTel1|scaffold_240591 (3660-4641) |
|
2-444, gnl|fr1|chrUn (27824200-27823220) |
|
2-444, gnl|galGal2|chr4 (53074433-53073452) |
|
2-444, gnl|hg17|chr4 (126728738-126729719) |
|
2-444, gnl|Hg17|chr4 (126729411-126729853) |
|
2-444, gnl|loxAfr1|scaffold_194 (74312-73331) |
|
2-444, gnl|mm7|chr3 (38798348-38799329) |
|
2-444, gnl|Mm7|chr3 (38799021-38799463) |
|
2-444, gnl|monDom2|scaffold_32 (1555714-1554733) |
|
2-444, gnl|oryCun1|scaffold_200176 (119628-120609) |
|
2-444, gnl|panTro1|chr3 (143583601-143584582) |
|
2-444, gnl|rheMac2|chr5 (117792005-117792986) |
|
2-444, gnl|rn3|chr2 (125892024-125893005) |
|
2-444, gnl|tetNig1|chr20 (2668372-2669353) |
|
2-444, gnl|xenTro1|scaffold_426 (1039114-1038133) |
