Ss1.1-Pig1-45A23.5
               |  | CTGTGCCTCCTTGTTTCCATCCTTGACTCATCGTCTTCCAAGCCATTCTCCAAACGTCAG
GTCTGATCCTGTCTCTTCTACACGCCACATATGTCACGTATCTTCTAAAGGCTTCCCACC
ACGGGTGAGATTAAAAAAATCCTAAATGTTGTCCCTGTTCTACAAAGCTCTGAGTTCTTG
CCTCCCTAGAATTCCCTCAGTCTCATTTGGAATTATTTCCCATCTTCCTCACCATCAGCC
TTTCTACTCTGCAAGCATGTCATGCTTATTTTCATCCTTATGCCTCCAGCGCTGGAGGGG
CCATACACCCAGGCGGTTTTCTTTAAAGTCCCTGTCTTCACGGAGTTTATGTTCCAGTGG
GGACACAAACGTGAGAAATAAGTTCAACCGACGTCTGAGCTGGCGGATGCAGAAAGGCAG
GGAAGTGTGTGGTTGTAGGGGAGAGGAACTGACAGGTGAGTAAGGTGGTCTGGGGAGGTG
ACCCGCGGAGGGTGACGTCGGAGCAGAGCTGAGAAGTGAGGGAGCGAAGCGAGGGGGAGC
ACGCCTGGCGCCTTGAGGAGGAGCAAAGACGAGTGGAGGGCGCAGGGAACAGGGGCCGTC
GAGACAGGCAGGGACCACGCGCATCACACCATGAGGGCTTCGGCCGCGGCCCTACACCGA
GGCCTCACCTTTCGACCCATCCCCGCCCACCCCGCCGCCGCCGGCGCCGCCGCCGCCGCC
GCCGGATTCCAACGCGCGCGCCCACTCGCCTCGTGAGGCCCGTAGACCACCGCTAGCGCC
TTGGTGTTGCCCTGCTCGATGTAGGCCGAGCCGTCGGCCTGCGCAAACACGCCCATCCGC
GCCTGGATCTTGCGCAGCTCCCGGGCGCGCCGGCCGTCCACACGGTAG | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | CTGTGCCTCCTTGTTTCCATCCTTGACTCATCGTCTTCCAAGCCATTCTCCAAACGTCAG
GTCTGATCCTGTCTCTTCTACACGCCACATATGTCACGTATCTTCTAAAGGCTTCCCACC
ACGGGTGAGATTAAAAAAATCCTAAATGTTGTCCCTGTTCTACAAAGCTCTGAGTTCTTG
CCTCCCTAGAATTCCCTCAGTCTCATTTGGAATTATTTCCCATCTTCCTCACCATCAGCC
TTTCTACTCTGCAAGCATGTCATGCTTATTTTCATCCTTATGCCTCCAGCGCTGGAGGGG
CCATACACCCAGGCGGTTTTCTTTAAAGTCCCTGTCTTCACGGAGTTTATGTTCCAGTGG
GGACACAAACGTGAGAAATAAGTTCAACCGACGTCTGAGCTGGCGGATGCAGAAAGGCAG
GGAAGTGTGTGGTTGTAGGGGAGAGGAACTGACAGGTGAGTAAGGTGGTCTGGGGAGGTG
ACCCGCGGAGGGTGACGTCGGAGCAGAGCTGAGAAGTGAGGGAGCGAAGCGAGGGGGAGC
ACGCCTGGCGCCTTGAGGAGGAGCAAAGACGAGTGGAGGGCGCAGGGAACAGGGGCCGTC
GAGACAGGCAGGGACCACGCGCATCACACCATGAGGGCTTCGGCCGCGGCCCTACACCGA
GGCCTCACCTTTCGACCCATCCCCGCCCACCCCGCCGCCGCCGGCGCCGCCGCCGCCGCC
GCCGGATTCCAACGCGCGCGCCCACTCGCCTCGTGAGGCCCGTAGACCACCGCTAGCGCC
TTGGTGTTGCCCTGCTCGATGTAGGCCGAGCCGTCGGCCTGCGCAAACACGCCCATCCGC
GCCTGGATCTTGCGCAGCTCCCGGGCGCGCCGGCCGTCCACACGGTAG | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map