Ss1.1-Pig1-50N12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCTGACCAGCTGTGAGTTCCTCAAGTACATCCTGTCGGTGAAGCAGGGGGACTGTCCAG CTCCTGAGAAAGCCAGCGGGTTTGCCGCCGCCTGCGTGGAAAGCTGCGAGGTGGACAACG AGTGCTCTGGGGTTAAGAAATGCTGCTCCAATGGATGCGGACACACCTGCCAGGTGCCCA AGACTCTGTACAAAGGCGTCCCCCTGAAGCCCAGGAAGGAGCTACGATTCACAGAGCTGC AGTCTGGACAGCTGGAGGTCAAGTGGTCCTCGAAATTCAATATTTCCATCGAGCCGGTGA TCTACGTGGTACAGAGGAGATGGAATTACGGAATCCACCCTAGTGAAGACGACGCCACGC CCTGGCAGACCATAGCCCAGACCACGGATGAGCGGGTCCAGCTGACCGACATACGACCCA GCAGGTGGTACCAGTTCCGCGTGGCGGCCGTCAACGTGCACGGGACCCGAGGCTTCACCG CCCCCAGCAAACACTTCCGCTCTTCCAAAGATCCAGCCGCACCACCGGCCCCAGCCAACC TCCGGCTCGCAAACTCCACCGTAAACAGCTATGGGAGCGTGAGTGTGACGATGGTTTGGG ACCTGCCCGAGGAACCAGACATCCCCGTGCATCACTACAAGGTGTTCTGGAGCTGGACGG TCAGCAGCAAGTCACTCGTGCCGACGAAGAAGAAGAGGAGGAAGACCACGGAGGGGTCTC AGAACTCCGTGACGCTGGAGCGGCTGCTGCCCAACT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCTGACCAGCTGTGAGTTCCTCAAGTACATCCTGTCGGTGAAGCAGGGGGACTGTCCAG CTCCTGAGAAAGCCAGCGGGTTTGCCGCCGCCTGCGTGGAAAGCTGCGAGGTGGACAACG AGTGCTCTGGGGTTAAGAAATGCTGCTCCAATGGATGCGGACACACCTGCCAGGTGCCCA AGACTCTGTACAAAGGCGTCCCCCTGAAGCCCAGGAAGGAGCTACGATTCACAGAGCTGC AGTCTGGACAGCTGGAGGTCAAGTGGTCCTCGAAATTCAATATTTCCATCGAGCCGGTGA TCTACGTGGTACAGAGGAGATGGAATTACGGAATCCACCCTAGTGAAGACGACGCCACGC CCTGGCAGACCATAGCCCAGACCACGGATGAGCGGGTCCAGCTGACCGACATACGACCCA GCAGGTGGTACCAGTTCCGCGTGGCGGCCGTCAACGTGCACGGGACCCGAGGCTTCACCG CCCCCAGCAAACACTTCCGCTCTTCCAAAGATCCAGCCGCACCACCGGCCCCAGCCAACC TCCGGCTCGCAAACTCCACCGTAAACAGCTATGGGAGCGTGAGTGTGACGATGGTTTGGG ACCTGCCCGAGGAACCAGACATCCCCGTGCATCACTACAAGGTGTTCTGGAGCTGGACGG TCAGCAGCAAGTCACTCGTGCCGACGAAGAAGAAGAGGAGGAAGACCACGGAGGGGTCTC AGAACTCCGTGACGCTGGAGCGGCTGCTGCCCAACT |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 4-196, gnl|bosTau2|chrX (44835218-44835410) | |
| 4-196, gnl|canFam2|chrX (5427293-5427060) | |
| 4-196, gnl|canFam2|chrX (5427060-5427290) | |
| 4-196, gnl|danRer3|chr1 (24393279-24393508) | |
| 4-196, gnl|danRer3|chr1 (24393508-24393278) | |
| 4-196, gnl|fr1|chrUn (176646700-176646928) | |
| 4-196, gnl|fr1|chrUn (176646929-176646700) | |
| 4-196, gnl|galGal2|chr1 (118674955-118675185) | |
| 4-196, gnl|galGal2|chr1 (118675183-118674955) | |
| 4-196, gnl|hg17|chrX (8374807-8375037) | |
| 4-196, gnl|Hg17|chrX (8375002-8374810) | |
| 4-196, gnl|hg17|chrY (14408511-14408741) | |
| 4-196, gnl|loxAfr1|scaffold_52015 (15182-14952) | |
| 4-196, gnl|loxAfr1|scaffold_52015 (14952-15182) | |
| 4-196, gnl|monDom2|scaffold_25 (34722719-34722949) | |
| 4-196, gnl|monDom2|scaffold_25 (34722949-34722719) | |
| 4-196, gnl|oryCun1|scaffold_138154 (4290-4081) | |
| 4-196, gnl|oryCun1|scaffold_138154 (4081-4290) | |
| 4-196, gnl|panTro1|chrX (8639128-8639358) | |
| 4-196, gnl|panTro1|chrY (15071730-15071960) | |
| 4-196, gnl|rheMac2|chrX (6186166-6185936) | |
| 4-196, gnl|rheMac2|chrX (6185936-6186166) | |
| 4-196, gnl|tetNig1|chr2 (10200710-10200480) | |
| 4-196, gnl|tetNig1|chr2 (10200480-10200710) | |
| 4-196, gnl|xenTro1|scaffold_1060 (236620-236390) | |
| 4-196, gnl|xenTro1|scaffold_1060 (236390-236620) | |
| 509-716, gnl|bosTau2|chrX (44864471-44864678) | |
| 509-716, gnl|canFam2|chrX (5404157-5403933) | |
| 509-716, gnl|canFam2|chrX (5403937-5404180) | |
| 509-716, gnl|danRer3|chr1 (24399813-24400019) | |
| 509-716, gnl|danRer3|chr1 (24400019-24399811) | |
| 509-716, gnl|dasNov1|scaffold_62414 (8587-8367) | |
| 509-716, gnl|dasNov1|scaffold_62414 (8368-8611) | |
| 509-716, gnl|echTel1|scaffold_144577 (617-394) | |
| 509-716, gnl|echTel1|scaffold_144577 (398-637) | |
| 509-716, gnl|fr1|chrUn (176654788-176655001) | |
| 509-716, gnl|fr1|chrUn (176655001-176654768) | |
| 509-716, gnl|galGal2|chr1 (118704512-118704729) | |
| 509-716, gnl|galGal2|chr1 (118704729-118704507) | |
| 509-716, gnl|hg17|chrX (8348266-8348510) | |
| 509-716, gnl|Hg17|chrX (8348483-8348276) | |
| 509-716, gnl|hg17|chrY (14437266-14437490) | |
| 509-716, gnl|loxAfr1|scaffold_155811 (891-1112) | |
| 509-716, gnl|loxAfr1|scaffold_155811 (1112-867) | |
| 509-716, gnl|monDom2|scaffold_25 (34751512-34751740) | |
| 509-716, gnl|monDom2|scaffold_25 (34751732-34751489) | |
| 509-716, gnl|oryCun1|scaffold_101960 (3086-3290) | |
| 509-716, gnl|oryCun1|scaffold_101960 (3287-3072) | |
| 509-716, gnl|panTro1|chrX (8612022-8612266) | |
| 509-716, gnl|panTro1|chrY (15100524-15100748) | |
| 509-716, gnl|tetNig1|chr2 (10193104-10192891) | |
| 509-716, gnl|tetNig1|chr2 (10192891-10193120) | |
| 509-716, gnl|xenTro1|scaffold_1060 (218210-217986) | |
| 509-716, gnl|xenTro1|scaffold_1060 (217990-218225) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 4-196, gnl|bosTau2|chrX (44835218-44835410) | |
| 4-196, gnl|canFam2|chrX (5427293-5427060) | |
| 4-196, gnl|canFam2|chrX (5427060-5427290) | |
| 4-196, gnl|danRer3|chr1 (24393279-24393508) | |
| 4-196, gnl|danRer3|chr1 (24393508-24393278) | |
| 4-196, gnl|fr1|chrUn (176646700-176646928) | |
| 4-196, gnl|fr1|chrUn (176646929-176646700) | |
| 4-196, gnl|galGal2|chr1 (118674955-118675185) | |
| 4-196, gnl|galGal2|chr1 (118675183-118674955) | |
| 4-196, gnl|hg17|chrX (8374807-8375037) | |
| 4-196, gnl|Hg17|chrX (8375002-8374810) | |
| 4-196, gnl|hg17|chrY (14408511-14408741) | |
| 4-196, gnl|loxAfr1|scaffold_52015 (15182-14952) | |
| 4-196, gnl|loxAfr1|scaffold_52015 (14952-15182) | |
| 4-196, gnl|monDom2|scaffold_25 (34722719-34722949) | |
| 4-196, gnl|monDom2|scaffold_25 (34722949-34722719) | |
| 4-196, gnl|oryCun1|scaffold_138154 (4290-4081) | |
| 4-196, gnl|oryCun1|scaffold_138154 (4081-4290) | |
| 4-196, gnl|panTro1|chrX (8639128-8639358) | |
| 4-196, gnl|panTro1|chrY (15071730-15071960) | |
| 4-196, gnl|rheMac2|chrX (6186166-6185936) | |
| 4-196, gnl|rheMac2|chrX (6185936-6186166) | |
| 4-196, gnl|tetNig1|chr2 (10200710-10200480) | |
| 4-196, gnl|tetNig1|chr2 (10200480-10200710) | |
| 4-196, gnl|xenTro1|scaffold_1060 (236620-236390) | |
| 4-196, gnl|xenTro1|scaffold_1060 (236390-236620) | |
| 509-716, gnl|bosTau2|chrX (44864471-44864678) | |
| 509-716, gnl|canFam2|chrX (5404157-5403933) | |
| 509-716, gnl|canFam2|chrX (5403937-5404180) | |
| 509-716, gnl|danRer3|chr1 (24399813-24400019) | |
| 509-716, gnl|danRer3|chr1 (24400019-24399811) | |
| 509-716, gnl|dasNov1|scaffold_62414 (8587-8367) | |
| 509-716, gnl|dasNov1|scaffold_62414 (8368-8611) | |
| 509-716, gnl|echTel1|scaffold_144577 (617-394) | |
| 509-716, gnl|echTel1|scaffold_144577 (398-637) | |
| 509-716, gnl|fr1|chrUn (176654788-176655001) | |
| 509-716, gnl|fr1|chrUn (176655001-176654768) | |
| 509-716, gnl|galGal2|chr1 (118704512-118704729) | |
| 509-716, gnl|galGal2|chr1 (118704729-118704507) | |
| 509-716, gnl|hg17|chrX (8348266-8348510) | |
| 509-716, gnl|Hg17|chrX (8348483-8348276) | |
| 509-716, gnl|hg17|chrY (14437266-14437490) | |
| 509-716, gnl|loxAfr1|scaffold_155811 (891-1112) | |
| 509-716, gnl|loxAfr1|scaffold_155811 (1112-867) | |
| 509-716, gnl|monDom2|scaffold_25 (34751512-34751740) | |
| 509-716, gnl|monDom2|scaffold_25 (34751732-34751489) | |
| 509-716, gnl|oryCun1|scaffold_101960 (3086-3290) | |
| 509-716, gnl|oryCun1|scaffold_101960 (3287-3072) | |
| 509-716, gnl|panTro1|chrX (8612022-8612266) | |
| 509-716, gnl|panTro1|chrY (15100524-15100748) | |
| 509-716, gnl|tetNig1|chr2 (10193104-10192891) | |
| 509-716, gnl|tetNig1|chr2 (10192891-10193120) | |
| 509-716, gnl|xenTro1|scaffold_1060 (218210-217986) | |
| 509-716, gnl|xenTro1|scaffold_1060 (217990-218225) |