Ss1.1-Pig1-50P07.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGAACATCTGACCCGGCTGCAGGATGCTGAGGAAATGAAGAAGGCACTGGAACAACAGAT GGAGAGCCACCGGGAAGCTCATCAGAAGCAGCTGTCCAGACTCCGAGATGAGATCGAGGA GAAGCAGAAAATCATCGATGAGATTCGGGATTTGAATCAGAAACTGCAACTGGGACAGGA GAAGCTCAGTTCTGATTATAATAAGCTGAAAATAGAGGACCAAGAGAGAGAGATGAAACT GGAAAAGCTCTTATTGCTCAATGATAAAAGGGAACAAGCCAGAGAGGACCTCAAAGGGCT AGAAGAGACAGTGTCTCGAGAGCTACAGACTCTACACAATCTCCGTAAACTCTTCGTCCA GGATCTGACCGCCCGTGTTAAAAAAAGCGTGGAGCTGGACAGTGACGATGGAGGAGGAAG TGCCGCCCAGAAGCAGAAAATTTCCTTCCTGGAGAATAACCTAGAGCAGCTCACTAAAGT TCACAAACAGCTCGTCCGGGACAACGCAGACCTGCGCTGTGAGCTGCCCAAACTGGAGAA GCGCCTGCGCGCCACAGCGGAGCGAGTTAAGGCGCTGGAGAGTGCGCTGAAAGAGGCCAA GGAGAATGCCATGCGGGACCGCAAGCGCTACCAGCAGGAGGTGGACCGTATCAAGGAGGC CGTGCGAGCCAAGAACATGGCCAGGAGGGCCCACTCGGCCCAGATTGCCAAGCCCATCCG CCCTGGACACTACCCAGCATCGTCTCCAACGGCTGT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGAACATCTGACCCGGCTGCAGGATGCTGAGGAAATGAAGAAGGCACTGGAACAACAGAT GGAGAGCCACCGGGAAGCTCATCAGAAGCAGCTGTCCAGACTCCGAGATGAGATCGAGGA GAAGCAGAAAATCATCGATGAGATTCGGGATTTGAATCAGAAACTGCAACTGGGACAGGA GAAGCTCAGTTCTGATTATAATAAGCTGAAAATAGAGGACCAAGAGAGAGAGATGAAACT GGAAAAGCTCTTATTGCTCAATGATAAAAGGGAACAAGCCAGAGAGGACCTCAAAGGGCT AGAAGAGACAGTGTCTCGAGAGCTACAGACTCTACACAATCTCCGTAAACTCTTCGTCCA GGATCTGACCGCCCGTGTTAAAAAAAGCGTGGAGCTGGACAGTGACGATGGAGGAGGAAG TGCCGCCCAGAAGCAGAAAATTTCCTTCCTGGAGAATAACCTAGAGCAGCTCACTAAAGT TCACAAACAGCTCGTCCGGGACAACGCAGACCTGCGCTGTGAGCTGCCCAAACTGGAGAA GCGCCTGCGCGCCACAGCGGAGCGAGTTAAGGCGCTGGAGAGTGCGCTGAAAGAGGCCAA GGAGAATGCCATGCGGGACCGCAAGCGCTACCAGCAGGAGGTGGACCGTATCAAGGAGGC CGTGCGAGCCAAGAACATGGCCAGGAGGGCCCACTCGGCCCAGATTGCCAAGCCCATCCG CCCTGGACACTACCCAGCATCGTCTCCAACGGCTGT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 36-150, - strand, RNAz p=0.555488 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 36-150, - strand, RNAz p=0.555488 |
| Aligned organism(s): 60 entry(ies) | More info |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
| 36-150, gnl|bosTau2|chr2 (33633094-33633208) | |
| 36-150, gnl|canFam2|chr19 (53678395-53678514) | |
| 36-150, gnl|danRer3|chr15 (23632514-23632628) | |
| 36-150, gnl|dasNov1|scaffold_48351 (11395-11276) | |
| 36-150, gnl|echTel1|scaffold_88917 (2098-1981) | |
| 36-150, gnl|fr1|chrUn (234896999-234896881) | |
| 36-150, gnl|galGal2|chr7 (35486846-35486965) | |
| 36-150, gnl|hg17|chr2 (149680420-149680539) | |
| 36-150, gnl|Hg17|chr2 (149680417-149680531) | |
| 36-150, gnl|loxAfr1|scaffold_37966 (52199-52082) | |
| 36-150, gnl|mm7|chr2 (49749248-49749367) | |
| 36-150, gnl|Mm7|chr2 (49749245-49749359) | |
| 36-150, gnl|monDom2|scaffold_2 (39306642-39306761) | |
| 36-150, gnl|oryCun1|scaffold_208495 (174948-174829) | |
| 36-150, gnl|panTro1|chr13 (38737540-38737659) | |
| 36-150, gnl|rheMac2|chr12 (12658853-12658972) | |
| 36-150, gnl|rn3|chr3 (30618891-30619010) | |
| 36-150, gnl|tetNig1|chrUn_random (83863487-83863368) | |
| 36-150, gnl|xenTro1|scaffold_456 (322863-322981) | |
| 151-252, gnl|bosTau2|chr2 (33635173-33635274) | |
| 151-252, gnl|Hg17|chr2 (149682445-149682546) | |
| 151-252, gnl|Mm7|chr2 (49751676-49751777) | |
| 487-707, gnl|bosTau2|chr5 (34723513-34723293) | |
| 487-707, gnl|canFam2|chr10 (4644481-4644664) | |
| 487-707, gnl|danRer3|chrUn (40302034-40302213) | |
| 487-707, gnl|dasNov1|scaffold_5444 (6498-6315) | |
| 487-707, gnl|echTel1|scaffold_173789 (1482-1658) | |
| 487-707, gnl|fr1|chrUn (206130241-206130417) | |
| 487-707, gnl|galGal2|chr7 (35493265-35493445) | |
| 487-707, gnl|hg17|chr12 (56260990-56261173) | |
| 487-707, gnl|Hg17|chr12 (56261002-56261222) | |
| 487-707, gnl|loxAfr1|scaffold_37966 (47278-47095) | |
| 487-707, gnl|mm7|chr10 (126732237-126732054) | |
| 487-707, gnl|Mm7|chr10 (126732223-126732003) | |
| 487-707, gnl|monDom2|scaffold_7 (36411889-36412071) | |
| 487-707, gnl|oryCun1|scaffold_214725 (43488-43657) | |
| 487-707, gnl|panTro1|chr10 (57504057-57504240) | |
| 487-707, gnl|rheMac2|chr11 (54660126-54660309) | |
| 487-707, gnl|rn3|chr7 (67210939-67210756) | |
| 487-707, gnl|tetNig1|chr11 (2610314-2610144) | |
| 487-707, gnl|xenTro1|scaffold_34 (3142215-3142034) | |
| 488-705, gnl|bosTau2|chr2 (33645335-33645552) | |
| 488-705, gnl|canFam2|chr19 (53689554-53689804) | |
| 488-705, gnl|danRer3|chrUn (40302044-40302265) | |
| 488-705, gnl|dasNov1|scaffold_5444 (6506-6258) | |
| 488-705, gnl|echTel1|scaffold_322132 (288094-288340) | |
| 488-705, gnl|fr1|chrUn (234896030-234895784) | |
| 488-705, gnl|galGal2|chr7 (35493265-35493505) | |
| 488-705, gnl|hg17|chr2 (149692133-149692390) | |
| 488-705, gnl|Hg17|chr2 (149692154-149692371) | |
| 488-705, gnl|loxAfr1|scaffold_1106 (33951-33693) | |
| 488-705, gnl|mm7|chr2 (49764627-49764878) | |
| 488-705, gnl|Mm7|chr2 (49764647-49764864) | |
| 488-705, gnl|monDom2|scaffold_2 (39325874-39326134) | |
| 488-705, gnl|oryCun1|scaffold_208495 (161695-161417) | |
| 488-705, gnl|panTro1|chr13 (38749268-38749525) | |
| 488-705, gnl|rheMac2|chr12 (12670640-12670897) | |
| 488-705, gnl|rn3|chr3 (30635931-30636182) | |
| 488-705, gnl|tetNig1|chrUn_random (83862633-83862406) | |
| 488-705, gnl|xenTro1|scaffold_456 (325801-326033) |
| Aligned organism(s): 60 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 36-150, gnl|bosTau2|chr2 (33633094-33633208) | |
| 36-150, gnl|canFam2|chr19 (53678395-53678514) | |
| 36-150, gnl|danRer3|chr15 (23632514-23632628) | |
| 36-150, gnl|dasNov1|scaffold_48351 (11395-11276) | |
| 36-150, gnl|echTel1|scaffold_88917 (2098-1981) | |
| 36-150, gnl|fr1|chrUn (234896999-234896881) | |
| 36-150, gnl|galGal2|chr7 (35486846-35486965) | |
| 36-150, gnl|hg17|chr2 (149680420-149680539) | |
| 36-150, gnl|Hg17|chr2 (149680417-149680531) | |
| 36-150, gnl|loxAfr1|scaffold_37966 (52199-52082) | |
| 36-150, gnl|mm7|chr2 (49749248-49749367) | |
| 36-150, gnl|Mm7|chr2 (49749245-49749359) | |
| 36-150, gnl|monDom2|scaffold_2 (39306642-39306761) | |
| 36-150, gnl|oryCun1|scaffold_208495 (174948-174829) | |
| 36-150, gnl|panTro1|chr13 (38737540-38737659) | |
| 36-150, gnl|rheMac2|chr12 (12658853-12658972) | |
| 36-150, gnl|rn3|chr3 (30618891-30619010) | |
| 36-150, gnl|tetNig1|chrUn_random (83863487-83863368) | |
| 36-150, gnl|xenTro1|scaffold_456 (322863-322981) | |
| 151-252, gnl|bosTau2|chr2 (33635173-33635274) | |
| 151-252, gnl|Hg17|chr2 (149682445-149682546) | |
| 151-252, gnl|Mm7|chr2 (49751676-49751777) | |
| 487-707, gnl|bosTau2|chr5 (34723513-34723293) | |
| 487-707, gnl|canFam2|chr10 (4644481-4644664) | |
| 487-707, gnl|danRer3|chrUn (40302034-40302213) | |
| 487-707, gnl|dasNov1|scaffold_5444 (6498-6315) | |
| 487-707, gnl|echTel1|scaffold_173789 (1482-1658) | |
| 487-707, gnl|fr1|chrUn (206130241-206130417) | |
| 487-707, gnl|galGal2|chr7 (35493265-35493445) | |
| 487-707, gnl|hg17|chr12 (56260990-56261173) | |
| 487-707, gnl|Hg17|chr12 (56261002-56261222) | |
| 487-707, gnl|loxAfr1|scaffold_37966 (47278-47095) | |
| 487-707, gnl|mm7|chr10 (126732237-126732054) | |
| 487-707, gnl|Mm7|chr10 (126732223-126732003) | |
| 487-707, gnl|monDom2|scaffold_7 (36411889-36412071) | |
| 487-707, gnl|oryCun1|scaffold_214725 (43488-43657) | |
| 487-707, gnl|panTro1|chr10 (57504057-57504240) | |
| 487-707, gnl|rheMac2|chr11 (54660126-54660309) | |
| 487-707, gnl|rn3|chr7 (67210939-67210756) | |
| 487-707, gnl|tetNig1|chr11 (2610314-2610144) | |
| 487-707, gnl|xenTro1|scaffold_34 (3142215-3142034) | |
| 488-705, gnl|bosTau2|chr2 (33645335-33645552) | |
| 488-705, gnl|canFam2|chr19 (53689554-53689804) | |
| 488-705, gnl|danRer3|chrUn (40302044-40302265) | |
| 488-705, gnl|dasNov1|scaffold_5444 (6506-6258) | |
| 488-705, gnl|echTel1|scaffold_322132 (288094-288340) | |
| 488-705, gnl|fr1|chrUn (234896030-234895784) | |
| 488-705, gnl|galGal2|chr7 (35493265-35493505) | |
| 488-705, gnl|hg17|chr2 (149692133-149692390) | |
| 488-705, gnl|Hg17|chr2 (149692154-149692371) | |
| 488-705, gnl|loxAfr1|scaffold_1106 (33951-33693) | |
| 488-705, gnl|mm7|chr2 (49764627-49764878) | |
| 488-705, gnl|Mm7|chr2 (49764647-49764864) | |
| 488-705, gnl|monDom2|scaffold_2 (39325874-39326134) | |
| 488-705, gnl|oryCun1|scaffold_208495 (161695-161417) | |
| 488-705, gnl|panTro1|chr13 (38749268-38749525) | |
| 488-705, gnl|rheMac2|chr12 (12670640-12670897) | |
| 488-705, gnl|rn3|chr3 (30635931-30636182) | |
| 488-705, gnl|tetNig1|chrUn_random (83862633-83862406) | |
| 488-705, gnl|xenTro1|scaffold_456 (325801-326033) |