Ss1.1-Pig1-54F04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGAAACGTGTCAACCGGAAACGCATTGAGCTGACGCGGGAAGTCCTGTTTGAACTGAAG CATATGCGGGATGTGCAGAATGAACACCTGACCAGGTTTGTGGGGGCCTGCACTGATCCC CCCAACATCTGTATCCTCACGGAGTACTGTCCCCGTGGGAGCCTACAGGACATTCTGGAG AATGAGAGCATCACGCTGGACTGGATGTTCCGGTACTCGCTCACCAACGACATCGTCAAG GGCATGCTGTTCCTGCACAATGGGGCCATTTGCTCCCATGGGAACCTCAAGTCATCCAAC TGCGTGGTAGATGGGCGCTTTGTGCTCAAGATCACCGACTATGGGCTGGAGAGCTTCAGG GACCCAGAGCCGGATCAAGGACACATCCTCTACGCCAAAAAGTTGTGGACAGCCCCTGAG CTCCTACGAATGGCCACACCGCCTGCGCGGGGCTCCCAAGCTGGGGACGTGTACAGCTTT GGGATTATCCTCCAGGAGATTGCCCTGAGGAGCGGTGTCTTCCACGTGGAAGGTCTGGAC CTCAGTCCTAAAGAGATCATCGAGCGTGTGACTCGGGGCGAGCAGCCCCCCTTCCGGCCC TCCCTGGCCCTGCAGAGTCACCTGGAGGAACTGGGGCAGCTGATGCAGCGGTGCTGGGCC GAGGACCCACAGGAGCGGCCACCCTTCCAGCAGATCCGCCTGATGCTGCGCAAATTTAAT AGGGAGAACAGCAGCAACATCCTGGACAACCTGCTGTCACGCATGGAGCAGTATGCCAAC AACCTGGAGGAGCTGGTGGAGGAGCGGACACAGGCCTACCTGGAGGAGAAGCGCAAGGCC GAGGCCCTGCTCTACCAGATTCTGCCTCACTCAGTGGCGGAGCAGCTGAAGCGCGGGGAG ACGGTCCAGGCTTGAAGCCTTTGACAGCGTTACTATCTACTTCAGCGACATTGTGGGTTT CACAGCGCTGTCAGCGGAGAGCACGCCCATGCAGGTGGTGACCCTGCTCAACGACCTGTA CACCTGCTTTGACGCTGTCATAGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGAAACGTGTCAACCGGAAACGCATTGAGCTGACGCGGGAAGTCCTGTTTGAACTGAAG CATATGCGGGATGTGCAGAATGAACACCTGACCAGGTTTGTGGGGGCCTGCACTGATCCC CCCAACATCTGTATCCTCACGGAGTACTGTCCCCGTGGGAGCCTACAGGACATTCTGGAG AATGAGAGCATCACGCTGGACTGGATGTTCCGGTACTCGCTCACCAACGACATCGTCAAG GGCATGCTGTTCCTGCACAATGGGGCCATTTGCTCCCATGGGAACCTCAAGTCATCCAAC TGCGTGGTAGATGGGCGCTTTGTGCTCAAGATCACCGACTATGGGCTGGAGAGCTTCAGG GACCCAGAGCCGGATCAAGGACACATCCTCTACGCCAAAAAGTTGTGGACAGCCCCTGAG CTCCTACGAATGGCCACACCGCCTGCGCGGGGCTCCCAAGCTGGGGACGTGTACAGCTTT GGGATTATCCTCCAGGAGATTGCCCTGAGGAGCGGTGTCTTCCACGTGGAAGGTCTGGAC CTCAGTCCTAAAGAGATCATCGAGCGTGTGACTCGGGGCGAGCAGCCCCCCTTCCGGCCC TCCCTGGCCCTGCAGAGTCACCTGGAGGAACTGGGGCAGCTGATGCAGCGGTGCTGGGCC GAGGACCCACAGGAGCGGCCACCCTTCCAGCAGATCCGCCTGATGCTGCGCAAATTTAAT AGGGAGAACAGCAGCAACATCCTGGACAACCTGCTGTCACGCATGGAGCAGTATGCCAAC AACCTGGAGGAGCTGGTGGAGGAGCGGACACAGGCCTACCTGGAGGAGAAGCGCAAGGCC GAGGCCCTGCTCTACCAGATTCTGCCTCACTCAGTGGCGGAGCAGCTGAAGCGCGGGGAG ACGGTCCAGGCTTGAAGCCTTTGACAGCGTTACTATCTACTTCAGCGACATTGTGGGTTT CACAGCGCTGTCAGCGGAGAGCACGCCCATGCAGGTGGTGACCCTGCTCAACGACCTGTA CACCTGCTTTGACGCTGTCATAGA |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | More info |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
| 60-169, gnl|bosTau2|chr3 (7924866-7924975) | |
| 60-169, gnl|canFam2|chr7 (46366621-46366464) | |
| 60-169, gnl|danRer3|chrNA (18843596-18843716) | |
| 60-169, gnl|dasNov1|scaffold_50629 (6345-6503) | |
| 60-169, gnl|echTel1|scaffold_273792 (3283-3421) | |
| 60-169, gnl|fr1|chrUn (39665674-39665541) | |
| 60-169, gnl|hg17|chr1 (150472174-150472331) | |
| 60-169, gnl|Hg17|chr1 (150472191-150472300) | |
| 60-169, gnl|loxAfr1|scaffold_31233 (25864-25706) | |
| 60-169, gnl|mm7|chr3 (90589494-90589344) | |
| 60-169, gnl|Mm7|chr3 (90589475-90589366) | |
| 60-169, gnl|monDom2|scaffold_59 (4385715-4385558) | |
| 60-169, gnl|oryCun1|scaffold_184457 (12745-12607) | |
| 60-169, gnl|panTro1|chr1 (132451869-132452026) | |
| 60-169, gnl|rheMac2|chr1 (132198391-132198548) | |
| 60-169, gnl|rn3|chr2 (182682875-182682725) | |
| 60-169, gnl|tetNig1|chrUn_random (10249657-10249798) | |
| 60-169, gnl|xenTro1|scaffold_1512 (72420-72541) | |
| 239-397, gnl|bosTau2|chr3 (7925405-7925563) | |
| 239-397, gnl|canFam2|chr7 (46366077-46365974) | |
| 239-397, gnl|danRer3|chrNA (18853506-18853609) | |
| 239-397, gnl|dasNov1|scaffold_50629 (6876-6979) | |
| 239-397, gnl|echTel1|scaffold_273792 (3802-3905) | |
| 239-397, gnl|fr1|chrUn (39664632-39664529) | |
| 239-397, gnl|hg17|chr1 (150472747-150472850) | |
| 239-397, gnl|Hg17|chr1 (150472747-150472905) | |
| 239-397, gnl|loxAfr1|scaffold_31233 (25294-25191) | |
| 239-397, gnl|mm7|chr3 (90588967-90588864) | |
| 239-397, gnl|Mm7|chr3 (90588965-90588807) | |
| 239-397, gnl|monDom2|scaffold_59 (4384969-4384866) | |
| 239-397, gnl|oryCun1|scaffold_184457 (8708-8605) | |
| 239-397, gnl|panTro1|chr1 (132452442-132452545) | |
| 239-397, gnl|rheMac2|chr1 (132198963-132199066) | |
| 239-397, gnl|rn3|chr2 (182682342-182682239) | |
| 239-397, gnl|tetNig1|chrUn_random (10250272-10250375) | |
| 239-397, gnl|xenTro1|scaffold_1512 (73795-73898) | |
| 552-723, gnl|bosTau2|chr3 (7926234-7926405) | |
| 552-723, gnl|Hg17|chr1 (150473600-150473771) | |
| 552-723, gnl|Mm7|chr3 (90587814-90587643) | |
| 780-1033, gnl|bosTau2|chr7 (23598362-23598110) | |
| 780-1033, gnl|canFam2|chr15 (56237726-56238257) | |
| 780-1033, gnl|danRer3|chr1 (24893854-24894358) | |
| 780-1033, gnl|dasNov1|scaffold_14817 (44186-43650) | |
| 780-1033, gnl|echTel1|scaffold_183567 (679-150) | |
| 780-1033, gnl|fr1|chrUn (117593306-117592763) | |
| 780-1033, gnl|galGal2|chr4 (21377467-21377990) | |
| 780-1033, gnl|hg17|chr4 (156991826-156992363) | |
| 780-1033, gnl|Hg17|chr4 (156992058-156992310) | |
| 780-1033, gnl|loxAfr1|scaffold_2846 (114334-114876) | |
| 780-1033, gnl|mm7|chr3 (82211168-82210630) | |
| 780-1033, gnl|Mm7|chr3 (82210931-82210679) | |
| 780-1033, gnl|monDom2|scaffold_9 (26554759-26555298) | |
| 780-1033, gnl|oryCun1|scaffold_104628 (4802-4262) | |
| 780-1033, gnl|panTro1|chr3 (174407017-174407554) | |
| 780-1033, gnl|rheMac2|chr5 (147904297-147904834) | |
| 780-1033, gnl|rn3|chr2 (173719297-173718761) | |
| 780-1033, gnl|tetNig1|chrUn_random (8292864-8293385) | |
| 780-1033, gnl|xenTro1|scaffold_93 (169402-168878) | |
| 865-997, gnl|bosTau2|chr3 (7927580-7927712) | |
| 865-997, gnl|Hg17|chr1 (150474731-150474863) | |
| 865-997, gnl|Mm7|chr3 (90586760-90586628) |
| Aligned organism(s): 61 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 60-169, gnl|bosTau2|chr3 (7924866-7924975) | |
| 60-169, gnl|canFam2|chr7 (46366621-46366464) | |
| 60-169, gnl|danRer3|chrNA (18843596-18843716) | |
| 60-169, gnl|dasNov1|scaffold_50629 (6345-6503) | |
| 60-169, gnl|echTel1|scaffold_273792 (3283-3421) | |
| 60-169, gnl|fr1|chrUn (39665674-39665541) | |
| 60-169, gnl|hg17|chr1 (150472174-150472331) | |
| 60-169, gnl|Hg17|chr1 (150472191-150472300) | |
| 60-169, gnl|loxAfr1|scaffold_31233 (25864-25706) | |
| 60-169, gnl|mm7|chr3 (90589494-90589344) | |
| 60-169, gnl|Mm7|chr3 (90589475-90589366) | |
| 60-169, gnl|monDom2|scaffold_59 (4385715-4385558) | |
| 60-169, gnl|oryCun1|scaffold_184457 (12745-12607) | |
| 60-169, gnl|panTro1|chr1 (132451869-132452026) | |
| 60-169, gnl|rheMac2|chr1 (132198391-132198548) | |
| 60-169, gnl|rn3|chr2 (182682875-182682725) | |
| 60-169, gnl|tetNig1|chrUn_random (10249657-10249798) | |
| 60-169, gnl|xenTro1|scaffold_1512 (72420-72541) | |
| 239-397, gnl|bosTau2|chr3 (7925405-7925563) | |
| 239-397, gnl|canFam2|chr7 (46366077-46365974) | |
| 239-397, gnl|danRer3|chrNA (18853506-18853609) | |
| 239-397, gnl|dasNov1|scaffold_50629 (6876-6979) | |
| 239-397, gnl|echTel1|scaffold_273792 (3802-3905) | |
| 239-397, gnl|fr1|chrUn (39664632-39664529) | |
| 239-397, gnl|hg17|chr1 (150472747-150472850) | |
| 239-397, gnl|Hg17|chr1 (150472747-150472905) | |
| 239-397, gnl|loxAfr1|scaffold_31233 (25294-25191) | |
| 239-397, gnl|mm7|chr3 (90588967-90588864) | |
| 239-397, gnl|Mm7|chr3 (90588965-90588807) | |
| 239-397, gnl|monDom2|scaffold_59 (4384969-4384866) | |
| 239-397, gnl|oryCun1|scaffold_184457 (8708-8605) | |
| 239-397, gnl|panTro1|chr1 (132452442-132452545) | |
| 239-397, gnl|rheMac2|chr1 (132198963-132199066) | |
| 239-397, gnl|rn3|chr2 (182682342-182682239) | |
| 239-397, gnl|tetNig1|chrUn_random (10250272-10250375) | |
| 239-397, gnl|xenTro1|scaffold_1512 (73795-73898) | |
| 552-723, gnl|bosTau2|chr3 (7926234-7926405) | |
| 552-723, gnl|Hg17|chr1 (150473600-150473771) | |
| 552-723, gnl|Mm7|chr3 (90587814-90587643) | |
| 780-1033, gnl|bosTau2|chr7 (23598362-23598110) | |
| 780-1033, gnl|canFam2|chr15 (56237726-56238257) | |
| 780-1033, gnl|danRer3|chr1 (24893854-24894358) | |
| 780-1033, gnl|dasNov1|scaffold_14817 (44186-43650) | |
| 780-1033, gnl|echTel1|scaffold_183567 (679-150) | |
| 780-1033, gnl|fr1|chrUn (117593306-117592763) | |
| 780-1033, gnl|galGal2|chr4 (21377467-21377990) | |
| 780-1033, gnl|hg17|chr4 (156991826-156992363) | |
| 780-1033, gnl|Hg17|chr4 (156992058-156992310) | |
| 780-1033, gnl|loxAfr1|scaffold_2846 (114334-114876) | |
| 780-1033, gnl|mm7|chr3 (82211168-82210630) | |
| 780-1033, gnl|Mm7|chr3 (82210931-82210679) | |
| 780-1033, gnl|monDom2|scaffold_9 (26554759-26555298) | |
| 780-1033, gnl|oryCun1|scaffold_104628 (4802-4262) | |
| 780-1033, gnl|panTro1|chr3 (174407017-174407554) | |
| 780-1033, gnl|rheMac2|chr5 (147904297-147904834) | |
| 780-1033, gnl|rn3|chr2 (173719297-173718761) | |
| 780-1033, gnl|tetNig1|chrUn_random (8292864-8293385) | |
| 780-1033, gnl|xenTro1|scaffold_93 (169402-168878) | |
| 865-997, gnl|bosTau2|chr3 (7927580-7927712) | |
| 865-997, gnl|Hg17|chr1 (150474731-150474863) | |
| 865-997, gnl|Mm7|chr3 (90586760-90586628) |