Ss1.1-Pig1-54L05.5
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CCCATTCCCAGGGGTGCTCCATTCTCTGGGCTCCCCACTACAAGGAGCTCATTTCAGGCC
ATGGCTTTGCCCATAACCAGCTGGGTATTTGGAAGTACCCCACCATGGGCAAGGGGGCTG
AGCTGAAAGTGACACAGCCCGGGTGCTGAGTCTGACCATGAGCCCAGACGGGGCCACAGT
GGCATCAGCAGCAGCAGATGAGACCCTGCGGCTGTGGCGCTGCTTTGAGCTGGACCCTGC
ACGGCGGCGGGAGCGGGAGAAGGCCAGCGCAGCCAAAAGCAGCCTCATCCACCAAGGCAT
CCGGTGAGGACCACCGCATCAGCTCGGTTTTTTTTGTGCTGTCTTTTTTTTTTTTTACTT
TTCAAAAAAAGCCACATGTCTCACCCTTTTAAAAAAAAAAAAAAAAGGGGGGCCCGTTTA
AAATTTTCCTTGGGGGGGCCAAATTTTCCCCCTCCCCTTTTTTTTTGAAAAAGGGGGCCC |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
CCCATTCCCAGGGGTGCTCCATTCTCTGGGCTCCCCACTACAAGGAGCTCATTTCAGGCC
ATGGCTTTGCCCATAACCAGCTGGGTATTTGGAAGTACCCCACCATGGGCAAGGGGGCTG
AGCTGAAAGTGACACAGCCCGGGTGCTGAGTCTGACCATGAGCCCAGACGGGGCCACAGT
GGCATCAGCAGCAGCAGATGAGACCCTGCGGCTGTGGCGCTGCTTTGAGCTGGACCCTGC
ACGGCGGCGGGAGCGGGAGAAGGCCAGCGCAGCCAAAAGCAGCCTCATCCACCAAGGCAT
CCGGTGAGGACCACCGCATCAGCTCGGTTTTTTTTGTGCTGTCTTTTTTTTTTTTTACTT
TTCAAAAAAAGCCACATGTCTCACCCTTTTAAAAAAAAAAAAAAAAGGGGGGCCCGTTTA
AAATTTTCCTTGGGGGGGCCAAATTTTCCCCCTCCCCTTTTTTTTTGAAAAAGGGGGCCC |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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129-388, gnl|bosTau2|chr3 (71728092-71728351) |
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129-388, gnl|canFam2|chr15 (19815173-19814993) |
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129-388, gnl|danRer3|chr2 (9732567-9732402) |
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129-388, gnl|dasNov1|scaffold_791 (76898-77078) |
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129-388, gnl|echTel1|scaffold_280394 (5692-5516) |
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129-388, gnl|fr1|chrUn (264251518-264251356) |
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129-388, gnl|galGal2|chr8 (19980468-19980648) |
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129-388, gnl|Hg17|chr1 (43497715-43497991) |
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129-388, gnl|hg17|chr9 (86857441-86857621) |
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129-388, gnl|loxAfr1|scaffold_33613 (18796-18972) |
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129-388, gnl|mm7|chr16 (91563680-91563489) |
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129-388, gnl|Mm7|chr4 (117809580-117809342) |
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129-388, gnl|monDom2|scaffold_87 (151372-151192) |
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129-388, gnl|oryCun1|scaffold_208417 (35172-34993) |
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129-388, gnl|panTro1|chr11 (70912676-70912856) |
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129-388, gnl|rheMac2|chr1 (46270166-46270345) |
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129-388, gnl|rn3|chr5 (131148798-131148643) |
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129-388, gnl|tetNig1|chr15 (5705344-5705505) |
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129-388, gnl|xenTro1|scaffold_1 (5566896-5567073) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
129-388, gnl|bosTau2|chr3 (71728092-71728351) |
|
129-388, gnl|canFam2|chr15 (19815173-19814993) |
|
129-388, gnl|danRer3|chr2 (9732567-9732402) |
|
129-388, gnl|dasNov1|scaffold_791 (76898-77078) |
|
129-388, gnl|echTel1|scaffold_280394 (5692-5516) |
|
129-388, gnl|fr1|chrUn (264251518-264251356) |
|
129-388, gnl|galGal2|chr8 (19980468-19980648) |
|
129-388, gnl|Hg17|chr1 (43497715-43497991) |
|
129-388, gnl|hg17|chr9 (86857441-86857621) |
|
129-388, gnl|loxAfr1|scaffold_33613 (18796-18972) |
|
129-388, gnl|mm7|chr16 (91563680-91563489) |
|
129-388, gnl|Mm7|chr4 (117809580-117809342) |
|
129-388, gnl|monDom2|scaffold_87 (151372-151192) |
|
129-388, gnl|oryCun1|scaffold_208417 (35172-34993) |
|
129-388, gnl|panTro1|chr11 (70912676-70912856) |
|
129-388, gnl|rheMac2|chr1 (46270166-46270345) |
|
129-388, gnl|rn3|chr5 (131148798-131148643) |
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129-388, gnl|tetNig1|chr15 (5705344-5705505) |
|
129-388, gnl|xenTro1|scaffold_1 (5566896-5567073) |
