Ss1.1-Pig1-57I08.5
|
TGCGAACCCTGGGCCAGCAAGCCAGGGTGTGGTTGGTGCGGGTGCTGATCAACCTGGCGG
TGTTGGCGCTCCTGGGAGCAGCCTTCTACGGAGTCTACTGGGCCACAAAGGCCACTGTGA
ACCTGCAGGATATGCCTCCTGTCCAGAAGATGCCACTGCTAAAGCTTGGGGTCAATTACC
TTCCATCCATTTTCATCTCCGTGGTCAACTTCATACTACCAGTGTTGTTCAAGCTCATTG
CCCCGCTGGAAGGCTACACCAGGAGCCGCCAGATCGTTTTTATCCTGCTCAGGACTGTGT
TTCTCCGCCTGGCCTCCCTGCTGGTCCTGCTCGGCACTCTCTGGAATCAGATCTCTTGCG
GGGAGGCTGAGTGCAAAGCCTGTGGCTATAATTACAAAGAACTTCCGTGCTGGGAGACTC
GGCTGGGGCAGGAGATGTACAAATTGCTGCTGTTTGATCTGCTGTCGGGTCTGGCCGTCA
TGCTGCTCATCCAGTTCCCTCGGAAGCTGCTCTGTGGCCTCTGTCCGGGGGCGCTGGGTC
GTTTCGCGCGGACCCAGGAGTTCCAGGTGCCTGACGAAGTGCTGGGACTCATCTACGCAC
AGACGGTGGTCTGGGTTGGGAGTTTTTTCTGCCCCTTACTGCCTTTGCTCAACACGGCCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGCGAACCCTGGGCCAGCAAGCCAGGGTGTGGTTGGTGCGGGTGCTGATCAACCTGGCGG
TGTTGGCGCTCCTGGGAGCAGCCTTCTACGGAGTCTACTGGGCCACAAAGGCCACTGTGA
ACCTGCAGGATATGCCTCCTGTCCAGAAGATGCCACTGCTAAAGCTTGGGGTCAATTACC
TTCCATCCATTTTCATCTCCGTGGTCAACTTCATACTACCAGTGTTGTTCAAGCTCATTG
CCCCGCTGGAAGGCTACACCAGGAGCCGCCAGATCGTTTTTATCCTGCTCAGGACTGTGT
TTCTCCGCCTGGCCTCCCTGCTGGTCCTGCTCGGCACTCTCTGGAATCAGATCTCTTGCG
GGGAGGCTGAGTGCAAAGCCTGTGGCTATAATTACAAAGAACTTCCGTGCTGGGAGACTC
GGCTGGGGCAGGAGATGTACAAATTGCTGCTGTTTGATCTGCTGTCGGGTCTGGCCGTCA
TGCTGCTCATCCAGTTCCCTCGGAAGCTGCTCTGTGGCCTCTGTCCGGGGGCGCTGGGTC
GTTTCGCGCGGACCCAGGAGTTCCAGGTGCCTGACGAAGTGCTGGGACTCATCTACGCAC
AGACGGTGGTCTGGGTTGGGAGTTTTTTCTGCCCCTTACTGCCTTTGCTCAACACGGCCA |
|
gi|61872328|ref|XP_609597.1| |
Protein identifier
|
gi|61872328|ref|XP_609597.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
127-293, gnl|bosTau2|chr18 (56107777-56107611) |
|
127-293, gnl|Hg17|chr19 (59359433-59359267) |
|
127-293, gnl|Mm7|chr7 (3294062-3293896) |
| |
|
487-657, gnl|bosTau2|chr18 (56106628-56106461) |
|
487-657, gnl|canFam2|chr1 (106128407-106128228) |
|
487-657, gnl|danRer3|chr16 (43431778-43431599) |
|
487-657, gnl|echTel1|scaffold_284539 (47761-47940) |
|
487-657, gnl|fr1|chrUn (200940959-200941136) |
|
487-657, gnl|hg17|chr19 (59357660-59357839) |
|
487-657, gnl|Hg17|chr19 (59357849-59357682) |
|
487-657, gnl|loxAfr1|scaffold_55084 (3023-2844) |
|
487-657, gnl|mm7|chr7 (3290410-3290589) |
|
487-657, gnl|Mm7|chr7 (3290599-3290432) |
|
487-657, gnl|monDom2|scaffold_191 (1307331-1307146) |
|
487-657, gnl|panTro1|chr20 (56801102-56801281) |
|
487-657, gnl|rheMac2|chr19 (60263481-60263660) |
|
487-657, gnl|rn3|chr1 (63939590-63939413) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
127-293, gnl|bosTau2|chr18 (56107777-56107611) |
|
127-293, gnl|Hg17|chr19 (59359433-59359267) |
|
127-293, gnl|Mm7|chr7 (3294062-3293896) |
| |
|
487-657, gnl|bosTau2|chr18 (56106628-56106461) |
|
487-657, gnl|canFam2|chr1 (106128407-106128228) |
|
487-657, gnl|danRer3|chr16 (43431778-43431599) |
|
487-657, gnl|echTel1|scaffold_284539 (47761-47940) |
|
487-657, gnl|fr1|chrUn (200940959-200941136) |
|
487-657, gnl|hg17|chr19 (59357660-59357839) |
|
487-657, gnl|Hg17|chr19 (59357849-59357682) |
|
487-657, gnl|loxAfr1|scaffold_55084 (3023-2844) |
|
487-657, gnl|mm7|chr7 (3290410-3290589) |
|
487-657, gnl|Mm7|chr7 (3290599-3290432) |
|
487-657, gnl|monDom2|scaffold_191 (1307331-1307146) |
|
487-657, gnl|panTro1|chr20 (56801102-56801281) |
|
487-657, gnl|rheMac2|chr19 (60263481-60263660) |
|
487-657, gnl|rn3|chr1 (63939590-63939413) |
