Non-Coding RNA Search

Ss1.1-Pig1-57N22.5

Sequence:


               
               ACTGCTCAATAATCTCCAAGACTTCCTTGCTGTGAGGCTCGTGTGGACCCCAGAGCATGC
TCAGGCTGGAAAGCAGCTGTGTGAAGAGGAGCGCCGGGCCATGCAGGCAGCCCTGGACTC
CGTTGTCTGCCACACGCCCCTCAACAACCTCGGCTTTTCCCGGAAGGGCAGCGCACTCAC
CTTCAGTGTGGCCTTCCAGGCTCTGAGGACGGGGCTCTTTGAGCTGAGCCAGCACATGAA
ACTGAAGCTGCAGTTCACGGCCAGCGTGTCCCACCCTCCGCCCGAAGCCCGGCCCCTGTC
TCGCAAGAGCAGCCCCAGCAGCCCCGCTGTCCGGGATCTGGTCGAGAGGCACCAGGCGAG
CCTGGGCCGATCTCAGTCCTTCTCCCACCAGCAGCCCTCCCGCAGCCACCTCATGAGGTC
CGGCAGCGTGATGGAGCGCAGGGCCATCACGCCCCCCGTGGCCTCCCCTGTTGGCCGCCC
CCTCTACCTGCCCCCGGACAAGGCTGTGCTCTCTCTGGACAAGATCGCCAAGCGCGAGTG
CAAGGTCCTGGTGGTGGAGCCCGTCAAGTAGCTGCCTCCCTCCTGCACTTCCGGAAATGG
ACAGCCCCCAAGGCGGTGCACCCTCCAGGCTGGGCCTCCTGGGGATGCCTCCCAGCTCCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               ACTGCTCAATAATCTCCAAGACTTCCTTGCTGTGAGGCTCGTGTGGACCCCAGAGCATGC
TCAGGCTGGAAAGCAGCTGTGTGAAGAGGAGCGCCGGGCCATGCAGGCAGCCCTGGACTC
CGTTGTCTGCCACACGCCCCTCAACAACCTCGGCTTTTCCCGGAAGGGCAGCGCACTCAC
CTTCAGTGTGGCCTTCCAGGCTCTGAGGACGGGGCTCTTTGAGCTGAGCCAGCACATGAA
ACTGAAGCTGCAGTTCACGGCCAGCGTGTCCCACCCTCCGCCCGAAGCCCGGCCCCTGTC
TCGCAAGAGCAGCCCCAGCAGCCCCGCTGTCCGGGATCTGGTCGAGAGGCACCAGGCGAG
CCTGGGCCGATCTCAGTCCTTCTCCCACCAGCAGCCCTCCCGCAGCCACCTCATGAGGTC
CGGCAGCGTGATGGAGCGCAGGGCCATCACGCCCCCCGTGGCCTCCCCTGTTGGCCGCCC
CCTCTACCTGCCCCCGGACAAGGCTGTGCTCTCTCTGGACAAGATCGCCAAGCGCGAGTG
CAAGGTCCTGGTGGTGGAGCCCGTCAAGTAGCTGCCTCCCTCCTGCACTTCCGGAAATGG
ACAGCCCCCAAGGCGGTGCACCCTCCAGGCTGGGCCTCCTGGGGATGCCTCCCAGCTCCT

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

Help | Less info


               
               gi|61875472|ref|XP_589329.1|

Coded protein: 1 entry(ies)

Help | Less info

Protein identifier


               
               gi|61875472|ref|XP_589329.1|

Aligned organism(s): 6 entry(ies)

More info

Aligned organism(s): 6 entry(ies)

Help | Less info


               
               68-229, gnl|bosTau2|chr25 (32622253-32622092)
               

               
               68-229, gnl|Hg17|chr7 (99398100-99397939)
               

               
               68-229, gnl|Mm7|chr5 (137206515-137206354)
               


               
               387-654, gnl|bosTau2|chr25 (33703821-33704098)
               

               
               387-654, gnl|Hg17|chr7 (99397440-99397188)
               

               
               387-654, gnl|Mm7|chr5 (137205951-137205681)

Aligned organism(s): 6 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               68-229, gnl|bosTau2|chr25 (32622253-32622092)
               

               
               68-229, gnl|Hg17|chr7 (99398100-99397939)
               

               
               68-229, gnl|Mm7|chr5 (137206515-137206354)
               


               
               387-654, gnl|bosTau2|chr25 (33703821-33704098)
               

               
               387-654, gnl|Hg17|chr7 (99397440-99397188)
               

               
               387-654, gnl|Mm7|chr5 (137205951-137205681)

	68-229, gnl\|bosTau2\|chr25 (32622253-32622092)
	68-229, gnl\|Hg17\|chr7 (99398100-99397939)
	68-229, gnl\|Mm7\|chr5 (137206515-137206354)

	387-654, gnl\|bosTau2\|chr25 (33703821-33704098)
	387-654, gnl\|Hg17\|chr7 (99397440-99397188)
	387-654, gnl\|Mm7\|chr5 (137205951-137205681)