Ss1.1-Pig1-58K20.5
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GGGAAGAGTGGGCCCCCCCTCAGGCTGTGTGACCCTGGACAAATCTACTCGCTCCTCTGA
GCCTCCACGCCCTATCTGGAACCACGGAACTGCCCTGAGGGGTTCCCACCTGCTCTTTCA
GCTAGACTTCGTCTTTGCCTGTCCTGCTCCGATGCTGGTCATTCCAGGCGACATCCTCAG
CATGAACACTGGACTGGGAGTGGGGCAGGCTCCTTTGGGAATGGCCAGCAGCTGTCCTCG
GAGCCTGGACCTTGCCCTTCTGCATGTGAACGTGCATCCCAAGAGCCCTCAACCTTGGTC
AAACCCTTCACCACGTTCTGAAGGAGGAGGAGTGTGCATGCCTGGGCCTGAGAGTGGGCC
TGCTGGGGCTTCTGAGGCCCCTTGCTGCTGGCTCTATCTCCCTCTCACTTGTGGGCCAGG
AAAGAGCAGGCCTCAAGGCACCGCTTACCCGACCCCAGGTGGAATGAAGCCCTTGATACA
CAGCTGAAGAGCCTCTGCCCACCCCTGGCGACTCTACCTGGGAGAGACCTGGCTAGAGAG
GAATACATGCACTTGCAGGAAAAGGCCAGTGCAGAGCAGCAAGGACGTGGCCACAGGCGG
CTCTTGCCATCCTGAGGGCGGGGTGGTTGTAATGAG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GGGAAGAGTGGGCCCCCCCTCAGGCTGTGTGACCCTGGACAAATCTACTCGCTCCTCTGA
GCCTCCACGCCCTATCTGGAACCACGGAACTGCCCTGAGGGGTTCCCACCTGCTCTTTCA
GCTAGACTTCGTCTTTGCCTGTCCTGCTCCGATGCTGGTCATTCCAGGCGACATCCTCAG
CATGAACACTGGACTGGGAGTGGGGCAGGCTCCTTTGGGAATGGCCAGCAGCTGTCCTCG
GAGCCTGGACCTTGCCCTTCTGCATGTGAACGTGCATCCCAAGAGCCCTCAACCTTGGTC
AAACCCTTCACCACGTTCTGAAGGAGGAGGAGTGTGCATGCCTGGGCCTGAGAGTGGGCC
TGCTGGGGCTTCTGAGGCCCCTTGCTGCTGGCTCTATCTCCCTCTCACTTGTGGGCCAGG
AAAGAGCAGGCCTCAAGGCACCGCTTACCCGACCCCAGGTGGAATGAAGCCCTTGATACA
CAGCTGAAGAGCCTCTGCCCACCCCTGGCGACTCTACCTGGGAGAGACCTGGCTAGAGAG
GAATACATGCACTTGCAGGAAAAGGCCAGTGCAGAGCAGCAAGGACGTGGCCACAGGCGG
CTCTTGCCATCCTGAGGGCGGGGTGGTTGTAATGAG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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23-356, gnl|bosTau2|chr11 (8637445-8637120) |
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23-356, gnl|Hg17|chr2 (73082727-73082403) |
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23-356, gnl|Mm7|chr6 (85244137-85243830) |
| |
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502-630, gnl|bosTau2|chr11 (8636875-8636744) |
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502-630, gnl|canFam2|chr17 (52968645-52968330) |
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502-630, gnl|echTel1|scaffold_308071 (1594-1900) |
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502-630, gnl|hg17|chr2 (73081888-73082150) |
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502-630, gnl|mm7|chr6 (85243460-85243594) |
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502-630, gnl|Mm7|chr6 (85243605-85243477) |
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502-630, gnl|monDom2|scaffold_202 (167493-167261) |
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502-630, gnl|oryCun1|scaffold_215301 (47978-48293) |
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502-630, gnl|rheMac2|chr13 (73238613-73238864) |
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502-630, gnl|rn3|chr4 (119705546-119705681) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
23-356, gnl|bosTau2|chr11 (8637445-8637120) |
|
23-356, gnl|Hg17|chr2 (73082727-73082403) |
|
23-356, gnl|Mm7|chr6 (85244137-85243830) |
| |
|
502-630, gnl|bosTau2|chr11 (8636875-8636744) |
|
502-630, gnl|canFam2|chr17 (52968645-52968330) |
|
502-630, gnl|echTel1|scaffold_308071 (1594-1900) |
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502-630, gnl|hg17|chr2 (73081888-73082150) |
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502-630, gnl|mm7|chr6 (85243460-85243594) |
|
502-630, gnl|Mm7|chr6 (85243605-85243477) |
|
502-630, gnl|monDom2|scaffold_202 (167493-167261) |
|
502-630, gnl|oryCun1|scaffold_215301 (47978-48293) |
|
502-630, gnl|rheMac2|chr13 (73238613-73238864) |
|
502-630, gnl|rn3|chr4 (119705546-119705681) |
