Ss1.1-Pig1-61G04.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGAATGTCACAGGGAACCAGGACATCTGCTACTACAACTTCCTCTGCGCCCACCCGCTG GGCAACCTCAGCGCCTTCAACAACATCCTCAGCAACCTGGGGTACATCCTGCTGGGGCTG CTCTTCCTGTTCATCATCCTGCAGCGGGAGATCAACCACAACCGGGCCCTGCTGCGCAAC GACCTCTATGCCCTGGAATGTGGGATCCCCAAACACTTTGGTCTCTTCTACGCCATGGGC ACGGCCCTGATGATGGAGGGGCTGCTTAGCGCCTGCTATCACGTCTGCCCCAACTATACC AATTTCCAGTTTGACACGTCATTCATGTACATGATCGCGGGGCTCTGCATGCTGAAGCTC TACCAGAAGCGGCACCCCGACATCAACGCCAGTGCCTACAGCGCCTACGCCTGCTTGGCC ATCGTCATCTTCTTCTCCGTGCTGGGCGTGGTCTTTGGCAAAGGGAACACCGCCTTCTGG ATCGTCTTCTCCATCATTCACATCATTTCCACCCTGCTGCTCAGCACACAGCTCTATTAC ATGGGCCGCTGGAAGCTGGACTCAGGCATCTGCCGTCGCATCCTCCACGTTCTCTACACG GACTGCATCCGGCAGTGCAGCGGGCCCCTCTACGTGGACCGCATGGTGCTGCTGGTTATG GGCAACATTATCAACTGGTCGCTGGCTGCCTACGGCCTCATCATGCGTCCCAATGATTTC GCCTCCTACTTGTTGGCCATTGGCATCTGCAACCTGCTTCTTTACTTTGCCTTCTACATC ATAATGAAGCTCCGGAGCGGGGAGAGGATCAAGCTCATCCCCCTGCTTTGCATCGTCTGC ACGTCGGTGGTCTGGGGCTTTGCCCTCTTCTTCTTCTTCCAGGGACTCAGCACCTGGCAG AAAACCCCCGCAGAGTCAAGGGAGCACAACCGGGACTGCATCCTCCTGGACTTCTTTGAT GACCACGACATCTGGCACTTTCTCTCCTCCATTGCCATGTTCGGGTCATTCCTGGTGTTG CTGACACTGGACGATGACCTGGACACCGTGCAGCGGGACAAGATCTATGTCTTTTAGCGG GAGCTGGACCCCCTCGCTTCACTCGTGGGGCCCTGAGCTCCTCCGCCTCACTGCCCGAGC CCCTGTAGGGCCGGGGGTGTGAGTCCCAGCCCTGCTGCCCAGTGCTGGGTGACTGTGGGA CAGCAAGGTCAAGCCCAGGCTTGGTCTGGGACGGTCATGGGGGTGGCCTTGAGCCTTGCT CCTGCCCTTGGCCAGGGAGGAGGCCTGCTCCCCCGAAGCTCCGGATGTTGGCCAAATTGC TGCTTTCTTCTC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGAATGTCACAGGGAACCAGGACATCTGCTACTACAACTTCCTCTGCGCCCACCCGCTG GGCAACCTCAGCGCCTTCAACAACATCCTCAGCAACCTGGGGTACATCCTGCTGGGGCTG CTCTTCCTGTTCATCATCCTGCAGCGGGAGATCAACCACAACCGGGCCCTGCTGCGCAAC GACCTCTATGCCCTGGAATGTGGGATCCCCAAACACTTTGGTCTCTTCTACGCCATGGGC ACGGCCCTGATGATGGAGGGGCTGCTTAGCGCCTGCTATCACGTCTGCCCCAACTATACC AATTTCCAGTTTGACACGTCATTCATGTACATGATCGCGGGGCTCTGCATGCTGAAGCTC TACCAGAAGCGGCACCCCGACATCAACGCCAGTGCCTACAGCGCCTACGCCTGCTTGGCC ATCGTCATCTTCTTCTCCGTGCTGGGCGTGGTCTTTGGCAAAGGGAACACCGCCTTCTGG ATCGTCTTCTCCATCATTCACATCATTTCCACCCTGCTGCTCAGCACACAGCTCTATTAC ATGGGCCGCTGGAAGCTGGACTCAGGCATCTGCCGTCGCATCCTCCACGTTCTCTACACG GACTGCATCCGGCAGTGCAGCGGGCCCCTCTACGTGGACCGCATGGTGCTGCTGGTTATG GGCAACATTATCAACTGGTCGCTGGCTGCCTACGGCCTCATCATGCGTCCCAATGATTTC GCCTCCTACTTGTTGGCCATTGGCATCTGCAACCTGCTTCTTTACTTTGCCTTCTACATC ATAATGAAGCTCCGGAGCGGGGAGAGGATCAAGCTCATCCCCCTGCTTTGCATCGTCTGC ACGTCGGTGGTCTGGGGCTTTGCCCTCTTCTTCTTCTTCCAGGGACTCAGCACCTGGCAG AAAACCCCCGCAGAGTCAAGGGAGCACAACCGGGACTGCATCCTCCTGGACTTCTTTGAT GACCACGACATCTGGCACTTTCTCTCCTCCATTGCCATGTTCGGGTCATTCCTGGTGTTG CTGACACTGGACGATGACCTGGACACCGTGCAGCGGGACAAGATCTATGTCTTTTAGCGG GAGCTGGACCCCCTCGCTTCACTCGTGGGGCCCTGAGCTCCTCCGCCTCACTGCCCGAGC CCCTGTAGGGCCGGGGGTGTGAGTCCCAGCCCTGCTGCCCAGTGCTGGGTGACTGTGGGA CAGCAAGGTCAAGCCCAGGCTTGGTCTGGGACGGTCATGGGGGTGGCCTTGAGCCTTGCT CCTGCCCTTGGCCAGGGAGGAGGCCTGCTCCCCCGAAGCTCCGGATGTTGGCCAAATTGC TGCTTTCTTCTC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 1127-1280, + strand, RNAz p=0.88243 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 1127-1280, + strand, RNAz p=0.88243 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of AK075471, + |
| Aligned organism(s): 57 entry(ies) | More info |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
| 69-196, gnl|bosTau2|chr15 (9194955-9195082) | |
| 69-196, gnl|canFam2|chr5 (19408711-19408595) | |
| 69-196, gnl|danRer3|chrNA (200457953-200458071) | |
| 69-196, gnl|dasNov1|scaffold_7946 (84310-84434) | |
| 69-196, gnl|echTel1|scaffold_308434 (44529-44411) | |
| 69-196, gnl|fr1|chrUn (188040887-188041002) | |
| 69-196, gnl|galGal2|chr24_random (145513-145628) | |
| 69-196, gnl|hg17|chr11 (116566068-116566184) | |
| 69-196, gnl|Hg17|chr11 (116566089-116566216) | |
| 69-196, gnl|loxAfr1|scaffold_1921 (155650-155720) | |
| 69-196, gnl|mm7|chr9 (45902635-45902519) | |
| 69-196, gnl|Mm7|chr9 (45902612-45902485) | |
| 69-196, gnl|monDom2|scaffold_2 (122082220-122082100) | |
| 69-196, gnl|oryCun1|scaffold_145250 (1099-979) | |
| 69-196, gnl|panTro1|chr9 (118566972-118567088) | |
| 69-196, gnl|rheMac2|chr14 (115588835-115588951) | |
| 69-196, gnl|rn3|chr8 (48924135-48924019) | |
| 69-196, gnl|tetNig1|chr16 (8000683-8000799) | |
| 69-196, gnl|xenTro1|scaffold_18 (1286538-1286419) | |
| 313-452, gnl|bosTau2|chr15 (9196229-9196368) | |
| 313-452, gnl|canFam2|chr5 (19407767-19407564) | |
| 313-452, gnl|echTel1|scaffold_128862 (349-533) | |
| 313-452, gnl|fr1|chrUn (188041333-188041507) | |
| 313-452, gnl|galGal2|chr24_random (145914-146070) | |
| 313-452, gnl|hg17|chr11 (116567793-116567993) | |
| 313-452, gnl|Hg17|chr11 (116567803-116567942) | |
| 313-452, gnl|loxAfr1|scaffold_4013 (4677-4856) | |
| 313-452, gnl|mm7|chr9 (45901320-45901128) | |
| 313-452, gnl|Mm7|chr9 (45901311-45901172) | |
| 313-452, gnl|monDom2|scaffold_2 (122080563-122080363) | |
| 313-452, gnl|oryCun1|scaffold_145250 (178-4) | |
| 313-452, gnl|panTro1|chr9 (118568674-118568874) | |
| 313-452, gnl|rheMac2|chr14 (115590278-115590478) | |
| 313-452, gnl|rn3|chr8 (48923205-48923013) | |
| 313-452, gnl|tetNig1|chr16 (8001192-8001377) | |
| 313-452, gnl|xenTro1|scaffold_18 (1282753-1282603) | |
| 788-900, gnl|bosTau2|chr15 (9198219-9198331) | |
| 788-900, gnl|canFam2|chr5 (19405738-19405620) | |
| 788-900, gnl|danRer3|chrNA (200486541-200486659) | |
| 788-900, gnl|dasNov1|scaffold_210764 (3709-3592) | |
| 788-900, gnl|echTel1|scaffold_308434 (42041-41923) | |
| 788-900, gnl|fr1|chrUn (188042343-188042460) | |
| 788-900, gnl|galGal2|chr1 (73305195-73305077) | |
| 788-900, gnl|hg17|chr11 (116569777-116569895) | |
| 788-900, gnl|Hg17|chr11 (116569777-116569889) | |
| 788-900, gnl|mm7|chr9 (45899538-45899420) | |
| 788-900, gnl|Mm7|chr9 (45899536-45899424) | |
| 788-900, gnl|monDom2|scaffold_2 (122075971-122075853) | |
| 788-900, gnl|oryCun1|scaffold_214625 (66791-66873) | |
| 788-900, gnl|panTro1|chr9 (118570661-118570779) | |
| 788-900, gnl|rheMac2|chr14 (115592251-115592369) | |
| 788-900, gnl|rn3|chr8 (48921470-48921352) | |
| 788-900, gnl|tetNig1|chr16 (8002087-8002204) | |
| 788-900, gnl|xenTro1|scaffold_18 (1280546-1280428) | |
| 1010-1332, gnl|bosTau2|chr15 (9199748-9200068) | |
| 1010-1332, gnl|Hg17|chr11 (116571925-116572248) | |
| 1010-1332, gnl|Mm7|chr9 (45897443-45897121) |
| Aligned organism(s): 57 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 69-196, gnl|bosTau2|chr15 (9194955-9195082) | |
| 69-196, gnl|canFam2|chr5 (19408711-19408595) | |
| 69-196, gnl|danRer3|chrNA (200457953-200458071) | |
| 69-196, gnl|dasNov1|scaffold_7946 (84310-84434) | |
| 69-196, gnl|echTel1|scaffold_308434 (44529-44411) | |
| 69-196, gnl|fr1|chrUn (188040887-188041002) | |
| 69-196, gnl|galGal2|chr24_random (145513-145628) | |
| 69-196, gnl|hg17|chr11 (116566068-116566184) | |
| 69-196, gnl|Hg17|chr11 (116566089-116566216) | |
| 69-196, gnl|loxAfr1|scaffold_1921 (155650-155720) | |
| 69-196, gnl|mm7|chr9 (45902635-45902519) | |
| 69-196, gnl|Mm7|chr9 (45902612-45902485) | |
| 69-196, gnl|monDom2|scaffold_2 (122082220-122082100) | |
| 69-196, gnl|oryCun1|scaffold_145250 (1099-979) | |
| 69-196, gnl|panTro1|chr9 (118566972-118567088) | |
| 69-196, gnl|rheMac2|chr14 (115588835-115588951) | |
| 69-196, gnl|rn3|chr8 (48924135-48924019) | |
| 69-196, gnl|tetNig1|chr16 (8000683-8000799) | |
| 69-196, gnl|xenTro1|scaffold_18 (1286538-1286419) | |
| 313-452, gnl|bosTau2|chr15 (9196229-9196368) | |
| 313-452, gnl|canFam2|chr5 (19407767-19407564) | |
| 313-452, gnl|echTel1|scaffold_128862 (349-533) | |
| 313-452, gnl|fr1|chrUn (188041333-188041507) | |
| 313-452, gnl|galGal2|chr24_random (145914-146070) | |
| 313-452, gnl|hg17|chr11 (116567793-116567993) | |
| 313-452, gnl|Hg17|chr11 (116567803-116567942) | |
| 313-452, gnl|loxAfr1|scaffold_4013 (4677-4856) | |
| 313-452, gnl|mm7|chr9 (45901320-45901128) | |
| 313-452, gnl|Mm7|chr9 (45901311-45901172) | |
| 313-452, gnl|monDom2|scaffold_2 (122080563-122080363) | |
| 313-452, gnl|oryCun1|scaffold_145250 (178-4) | |
| 313-452, gnl|panTro1|chr9 (118568674-118568874) | |
| 313-452, gnl|rheMac2|chr14 (115590278-115590478) | |
| 313-452, gnl|rn3|chr8 (48923205-48923013) | |
| 313-452, gnl|tetNig1|chr16 (8001192-8001377) | |
| 313-452, gnl|xenTro1|scaffold_18 (1282753-1282603) | |
| 788-900, gnl|bosTau2|chr15 (9198219-9198331) | |
| 788-900, gnl|canFam2|chr5 (19405738-19405620) | |
| 788-900, gnl|danRer3|chrNA (200486541-200486659) | |
| 788-900, gnl|dasNov1|scaffold_210764 (3709-3592) | |
| 788-900, gnl|echTel1|scaffold_308434 (42041-41923) | |
| 788-900, gnl|fr1|chrUn (188042343-188042460) | |
| 788-900, gnl|galGal2|chr1 (73305195-73305077) | |
| 788-900, gnl|hg17|chr11 (116569777-116569895) | |
| 788-900, gnl|Hg17|chr11 (116569777-116569889) | |
| 788-900, gnl|mm7|chr9 (45899538-45899420) | |
| 788-900, gnl|Mm7|chr9 (45899536-45899424) | |
| 788-900, gnl|monDom2|scaffold_2 (122075971-122075853) | |
| 788-900, gnl|oryCun1|scaffold_214625 (66791-66873) | |
| 788-900, gnl|panTro1|chr9 (118570661-118570779) | |
| 788-900, gnl|rheMac2|chr14 (115592251-115592369) | |
| 788-900, gnl|rn3|chr8 (48921470-48921352) | |
| 788-900, gnl|tetNig1|chr16 (8002087-8002204) | |
| 788-900, gnl|xenTro1|scaffold_18 (1280546-1280428) | |
| 1010-1332, gnl|bosTau2|chr15 (9199748-9200068) | |
| 1010-1332, gnl|Hg17|chr11 (116571925-116572248) | |
| 1010-1332, gnl|Mm7|chr9 (45897443-45897121) |