Ss1.1-Pig1-61P08.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCGAGCGCCGACGCCCCGCGCCCCGGTCATGGGGAACGTGCCCTCCGCGGTGAAGCAC TGCCTCAGCTACCAGCAGCTTCTCCGGGAGCATCTCTGGATCGGGGATTCAGTGGCAGGG GCGCTCGACCCCGCGCAGGAACCCTCCCGGTTATCTGGACTCCCTGAGTATGTTAAAATA GTTGAAGTTGGACCTAGGGATGGATTGCAGAATGAAAAGGTTATAGTCCCTACAGATATA AAAATTGAATTTATCAATCAGCTTTCGCAAACCGGCTTGTCTGTAATAGAAGTGACAAGC TTTGTGTCTTCCAGATGGATACCACAGATGGCTGACCACACGGAAGTGATGAAGGGCATT CGTCAGTATCCAGGAATTCGCTATCCTGTCCTAACTCCGAATCTCCAGGGTTTTCACCGT GCTGTTGCTGCAGGAGCCACTGAGGTATCAGTTTTTGGTGCCGCCTCTGAATCCTTTAGC AAGAAGAATATTAACTGTTCTATCGAAGAAAAGTATGGAGAAGTTTGAGGAGGTCGTTAA GTCTGCAAGGCACATGAATATTCCAGCTCGAGGGTATGTATCCTGCGC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCGAGCGCCGACGCCCCGCGCCCCGGTCATGGGGAACGTGCCCTCCGCGGTGAAGCAC TGCCTCAGCTACCAGCAGCTTCTCCGGGAGCATCTCTGGATCGGGGATTCAGTGGCAGGG GCGCTCGACCCCGCGCAGGAACCCTCCCGGTTATCTGGACTCCCTGAGTATGTTAAAATA GTTGAAGTTGGACCTAGGGATGGATTGCAGAATGAAAAGGTTATAGTCCCTACAGATATA AAAATTGAATTTATCAATCAGCTTTCGCAAACCGGCTTGTCTGTAATAGAAGTGACAAGC TTTGTGTCTTCCAGATGGATACCACAGATGGCTGACCACACGGAAGTGATGAAGGGCATT CGTCAGTATCCAGGAATTCGCTATCCTGTCCTAACTCCGAATCTCCAGGGTTTTCACCGT GCTGTTGCTGCAGGAGCCACTGAGGTATCAGTTTTTGGTGCCGCCTCTGAATCCTTTAGC AAGAAGAATATTAACTGTTCTATCGAAGAAAAGTATGGAGAAGTTTGAGGAGGTCGTTAA GTCTGCAAGGCACATGAATATTCCAGCTCGAGGGTATGTATCCTGCGC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 218-327, + strand, RNAz p=0.715752 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 218-327, + strand, RNAz p=0.715752 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of BC024194, + |
| Aligned organism(s): 32 entry(ies) | More info |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
| 17-149, gnl|bosTau2|chr23 (1061320-1061189) | |
| 17-149, gnl|canFam2|chr12 (25955608-25955774) | |
| 17-149, gnl|dasNov1|scaffold_3902 (6030-6206) | |
| 17-149, gnl|echTel1|scaffold_283367 (44253-44410) | |
| 17-149, gnl|galGal2|chr3 (85788287-85788119) | |
| 17-149, gnl|hg17|chr6 (55551682-55551855) | |
| 17-149, gnl|Hg17|chr6 (55551826-55551694) | |
| 17-149, gnl|mm7|chr9 (76052347-76052172) | |
| 17-149, gnl|Mm7|chr9_random (3497080-3496948) | |
| 17-149, gnl|monDom2|scaffold_0 (180325840-180325621) | |
| 17-149, gnl|oryCun1|scaffold_137895 (5234-5061) | |
| 17-149, gnl|panTro1|chr5 (56838600-56838773) | |
| 17-149, gnl|rheMac2|chr4 (55227332-55227504) | |
| 17-149, gnl|rn3|chr8 (80853424-80853248) | |
| 218-327, gnl|bosTau2|chr23 (4258100-4257991) | |
| 218-327, gnl|canFam2|chr12 (25901473-25901597) | |
| 218-327, gnl|dasNov1|scaffold_215241 (1478-1351) | |
| 218-327, gnl|echTel1|scaffold_311289 (6585-6714) | |
| 218-327, gnl|fr1|chrUn (279838559-279838691) | |
| 218-327, gnl|galGal2|chr3 (85808928-85808790) | |
| 218-327, gnl|hg17|chr6 (55514484-55514608) | |
| 218-327, gnl|Hg17|chr6 (55514595-55514486) | |
| 218-327, gnl|loxAfr1|scaffold_807 (92523-92408) | |
| 218-327, gnl|mm7|chr9 (76093704-76093577) | |
| 218-327, gnl|Mm7|chr9 (76093591-76093700) | |
| 218-327, gnl|monDom2|scaffold_0 (180399280-180399156) | |
| 218-327, gnl|oryCun1|scaffold_204825 (45570-45696) | |
| 218-327, gnl|panTro1|chr5 (56800852-56800976) | |
| 218-327, gnl|rheMac2|chr4 (55193300-55193424) | |
| 218-327, gnl|rn3|chr8 (80891964-80891839) | |
| 218-327, gnl|tetNig1|chr17 (4393833-4393701) | |
| 218-327, gnl|xenTro1|scaffold_1279 (27705-27823) |
| Aligned organism(s): 32 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 17-149, gnl|bosTau2|chr23 (1061320-1061189) | |
| 17-149, gnl|canFam2|chr12 (25955608-25955774) | |
| 17-149, gnl|dasNov1|scaffold_3902 (6030-6206) | |
| 17-149, gnl|echTel1|scaffold_283367 (44253-44410) | |
| 17-149, gnl|galGal2|chr3 (85788287-85788119) | |
| 17-149, gnl|hg17|chr6 (55551682-55551855) | |
| 17-149, gnl|Hg17|chr6 (55551826-55551694) | |
| 17-149, gnl|mm7|chr9 (76052347-76052172) | |
| 17-149, gnl|Mm7|chr9_random (3497080-3496948) | |
| 17-149, gnl|monDom2|scaffold_0 (180325840-180325621) | |
| 17-149, gnl|oryCun1|scaffold_137895 (5234-5061) | |
| 17-149, gnl|panTro1|chr5 (56838600-56838773) | |
| 17-149, gnl|rheMac2|chr4 (55227332-55227504) | |
| 17-149, gnl|rn3|chr8 (80853424-80853248) | |
| 218-327, gnl|bosTau2|chr23 (4258100-4257991) | |
| 218-327, gnl|canFam2|chr12 (25901473-25901597) | |
| 218-327, gnl|dasNov1|scaffold_215241 (1478-1351) | |
| 218-327, gnl|echTel1|scaffold_311289 (6585-6714) | |
| 218-327, gnl|fr1|chrUn (279838559-279838691) | |
| 218-327, gnl|galGal2|chr3 (85808928-85808790) | |
| 218-327, gnl|hg17|chr6 (55514484-55514608) | |
| 218-327, gnl|Hg17|chr6 (55514595-55514486) | |
| 218-327, gnl|loxAfr1|scaffold_807 (92523-92408) | |
| 218-327, gnl|mm7|chr9 (76093704-76093577) | |
| 218-327, gnl|Mm7|chr9 (76093591-76093700) | |
| 218-327, gnl|monDom2|scaffold_0 (180399280-180399156) | |
| 218-327, gnl|oryCun1|scaffold_204825 (45570-45696) | |
| 218-327, gnl|panTro1|chr5 (56800852-56800976) | |
| 218-327, gnl|rheMac2|chr4 (55193300-55193424) | |
| 218-327, gnl|rn3|chr8 (80891964-80891839) | |
| 218-327, gnl|tetNig1|chr17 (4393833-4393701) | |
| 218-327, gnl|xenTro1|scaffold_1279 (27705-27823) |