Ss1.1-Pig1-66E07.5
|
GAGAGGTTGCTGGAAAAGCCCTTAAGACACAGGGACCTCAGGATGCTTGTGAAAGTCAGG
GGGCTGTGGGGAGCTGTTGTGTGTCTGGGGCCTTAGCTTCTGTGTCTCCCCCAGGGCAGC
AATGCTGGTCACCTCTCATTCTTTACGAAGGTGTGCTATGGCATTGGCGGGGTCCCAAAC
CAGGTGGCCTCCAGCGCCATAGCCTTTTACCTGCAACTCTTCCTGCTCGATGTGGCACAG
ATCCCTGCTGCCCAGGTGTCACTTGTCCTGTTTGGAGGGAAGGTGTCTGGGGCAGCAACC
GACCCTTTGGCTGGATTCCTCATCAACAGAAGCAGGAGGACAGGGTCTGGACGACTCATG
CCCTGGGTGCTGGGCTGCACACCCTTCATCGCGCTTGGCTTACTTCTTCCTGTGGTTCCT
GCCTCCCTTCACCAGCCTTCAAGGCCTCTGGTACACAACCCTCTACTGCCTGTTCCAGGC
TCTGGCCACGTTCTTCCAGGTGCCCTACACGGCGCTGACCATGCTCTT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAGAGGTTGCTGGAAAAGCCCTTAAGACACAGGGACCTCAGGATGCTTGTGAAAGTCAGG
GGGCTGTGGGGAGCTGTTGTGTGTCTGGGGCCTTAGCTTCTGTGTCTCCCCCAGGGCAGC
AATGCTGGTCACCTCTCATTCTTTACGAAGGTGTGCTATGGCATTGGCGGGGTCCCAAAC
CAGGTGGCCTCCAGCGCCATAGCCTTTTACCTGCAACTCTTCCTGCTCGATGTGGCACAG
ATCCCTGCTGCCCAGGTGTCACTTGTCCTGTTTGGAGGGAAGGTGTCTGGGGCAGCAACC
GACCCTTTGGCTGGATTCCTCATCAACAGAAGCAGGAGGACAGGGTCTGGACGACTCATG
CCCTGGGTGCTGGGCTGCACACCCTTCATCGCGCTTGGCTTACTTCTTCCTGTGGTTCCT
GCCTCCCTTCACCAGCCTTCAAGGCCTCTGGTACACAACCCTCTACTGCCTGTTCCAGGC
TCTGGCCACGTTCTTCCAGGTGCCCTACACGGCGCTGACCATGCTCTT
|
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gi|62650442|ref|XP_575999.1| |
Protein identifier
|
gi|62650442|ref|XP_575999.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-240, gnl|bosTau2|chr11 (56376313-56376076) |
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1-240, gnl|Hg17|chr2 (24147683-24147931) |
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1-240, gnl|Mm7|chr12 (4815332-4815090) |
| |
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365-490, gnl|bosTau2|chr11 (56373921-56373797) |
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365-490, gnl|canFam2|chr17 (21480996-21481142) |
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365-490, gnl|danRer3|chr13 (38597285-38597444) |
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365-490, gnl|dasNov1|scaffold_2262 (37538-37712) |
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365-490, gnl|echTel1|scaffold_149177 (713-882) |
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365-490, gnl|fr1|chrUn (187760672-187760823) |
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365-490, gnl|hg17|chr2 (24151352-24151528) |
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365-490, gnl|Hg17|chr2 (24151365-24151489) |
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365-490, gnl|loxAfr1|scaffold_20296 (12880-13031) |
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365-490, gnl|mm7|chr12 (4813385-4813217) |
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365-490, gnl|Mm7|chr12 (4813373-4813249) |
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365-490, gnl|oryCun1|scaffold_115495 (6868-6703) |
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365-490, gnl|panTro1|chr12 (25029158-25029330) |
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365-490, gnl|rheMac2|chr13 (23909494-23909666) |
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365-490, gnl|rn3|chr6 (28179567-28179395) |
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365-490, gnl|tetNig1|chr14 (7734741-7734882) |
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365-490, gnl|xenTro1|scaffold_226 (696620-696462) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-240, gnl|bosTau2|chr11 (56376313-56376076) |
|
1-240, gnl|Hg17|chr2 (24147683-24147931) |
|
1-240, gnl|Mm7|chr12 (4815332-4815090) |
| |
|
365-490, gnl|bosTau2|chr11 (56373921-56373797) |
|
365-490, gnl|canFam2|chr17 (21480996-21481142) |
|
365-490, gnl|danRer3|chr13 (38597285-38597444) |
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365-490, gnl|dasNov1|scaffold_2262 (37538-37712) |
|
365-490, gnl|echTel1|scaffold_149177 (713-882) |
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365-490, gnl|fr1|chrUn (187760672-187760823) |
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365-490, gnl|hg17|chr2 (24151352-24151528) |
|
365-490, gnl|Hg17|chr2 (24151365-24151489) |
|
365-490, gnl|loxAfr1|scaffold_20296 (12880-13031) |
|
365-490, gnl|mm7|chr12 (4813385-4813217) |
|
365-490, gnl|Mm7|chr12 (4813373-4813249) |
|
365-490, gnl|oryCun1|scaffold_115495 (6868-6703) |
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365-490, gnl|panTro1|chr12 (25029158-25029330) |
|
365-490, gnl|rheMac2|chr13 (23909494-23909666) |
|
365-490, gnl|rn3|chr6 (28179567-28179395) |
|
365-490, gnl|tetNig1|chr14 (7734741-7734882) |
|
365-490, gnl|xenTro1|scaffold_226 (696620-696462) |
