Ss1.1-Pig1-68O09.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTGGCCCTCGCCAAGAGCCTGCGGCAGAGGCGGGCCCAGGCTCGCTACGTCGGCCCGCCG CCCACCGTGGCCGAGCTGGTAGAGGCCCACACCAACTTCAGCTTCCAGCCCGACACGCCC GCGCCCAGCGCCGACCCTGGGCCCTATGTCCAAGAGCAAGCGCCGCCCATCCCCGGCACC CCACCCCCCAACTACGACTCCCTGCGCCTGCAGCCCCTGGACGTCATTGAGTCTGACGGC GAGGGCGATGCCGTCTAGACCCTGCGCTACCCATCCCGGGCAGCCCAAGACTTCCGACCC GAGCAGCTGAGATCACTGGCCAATTTTGTGATGCCCTCCCCCAGGGGCTGGGATGTTGGG TGCCCAAGGCCGGAGTCCCGGTTCCCCTACGGAAAGGCCAGCAGCTCCTGGCCAGTCCCA GGCAGAGGGTTCTGTGGGGTCACGGGGCTGGTACAGATGGGGGAATTGTGTTCCTGTCCA TACCCGCAGCCTGACCCGCCCCTTGGCCTGGGATGCCCCCGGCCAGGCTCCGAGACCGCT CCAATCACCATCTGCCCAGATATGAACAAGTGGTGAGGCCATGCCTTCTGTCCCCAGAAT CAGCATTCTTTTCCTTCCTGGCCTCTGCTGACTGGGGTTTATTCAGGGCAGCAGTGGTGG GGAGCAGGGAGAACACCAGGCATCGGAGGCCCTGCCAGGTGGCACACGTTTTGTTCTAGA AAATAAAAGTAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTGGCCCTCGCCAAGAGCCTGCGGCAGAGGCGGGCCCAGGCTCGCTACGTCGGCCCGCCG CCCACCGTGGCCGAGCTGGTAGAGGCCCACACCAACTTCAGCTTCCAGCCCGACACGCCC GCGCCCAGCGCCGACCCTGGGCCCTATGTCCAAGAGCAAGCGCCGCCCATCCCCGGCACC CCACCCCCCAACTACGACTCCCTGCGCCTGCAGCCCCTGGACGTCATTGAGTCTGACGGC GAGGGCGATGCCGTCTAGACCCTGCGCTACCCATCCCGGGCAGCCCAAGACTTCCGACCC GAGCAGCTGAGATCACTGGCCAATTTTGTGATGCCCTCCCCCAGGGGCTGGGATGTTGGG TGCCCAAGGCCGGAGTCCCGGTTCCCCTACGGAAAGGCCAGCAGCTCCTGGCCAGTCCCA GGCAGAGGGTTCTGTGGGGTCACGGGGCTGGTACAGATGGGGGAATTGTGTTCCTGTCCA TACCCGCAGCCTGACCCGCCCCTTGGCCTGGGATGCCCCCGGCCAGGCTCCGAGACCGCT CCAATCACCATCTGCCCAGATATGAACAAGTGGTGAGGCCATGCCTTCTGTCCCCAGAAT CAGCATTCTTTTCCTTCCTGGCCTCTGCTGACTGGGGTTTATTCAGGGCAGCAGTGGTGG GGAGCAGGGAGAACACCAGGCATCGGAGGCCCTGCCAGGTGGCACACGTTTTGTTCTAGA AAATAAAAGTAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | More info |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
| 40-159, - strand, RNAz p=0.647371 | |
| 362-512, - strand, RNAz p=0.966733 | |
| 416-512, + strand, RNAz p=0.966722 | |
| 541-656, - strand, RNAz p=0.955504 |
| Predicted RNA structure(s): 4 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 40-159, - strand, RNAz p=0.647371 | |
| 362-512, - strand, RNAz p=0.966733 | |
| 416-512, + strand, RNAz p=0.966722 | |
| 541-656, - strand, RNAz p=0.955504 |
| Aligned organism(s): 24 entry(ies) | More info |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
| 1-323, gnl|bosTau2|chr25 (19558223-19558543) | |
| 1-323, gnl|Hg17|chr16 (23299366-23299733) | |
| 1-323, gnl|Mm7|chr7 (117842067-117842384) | |
| 362-512, gnl|bosTau2|chr25 (19558538-19558688) | |
| 362-512, gnl|canFam2|chr6 (25463924-25463342) | |
| 362-512, gnl|echTel1|scaffold_277608 (45116-44662) | |
| 362-512, gnl|hg17|chr16 (23299631-23300162) | |
| 362-512, gnl|Hg17|chr16 (23299728-23299893) | |
| 362-512, gnl|loxAfr1|scaffold_16046 (58132-57610) | |
| 362-512, gnl|mm7|chr7 (117842332-117842826) | |
| 362-512, gnl|Mm7|chr7 (117842379-117842575) | |
| 362-512, gnl|panTro1|chr18 (23915944-23916474) | |
| 362-512, gnl|rheMac2|chr20 (21876758-21877299) | |
| 362-512, gnl|rn3|chr1 (180887533-180888030) | |
| 541-730, gnl|bosTau2|chr25 (19558741-19558926) | |
| 541-730, gnl|canFam2|chr6 (25463924-25463342) | |
| 541-730, gnl|echTel1|scaffold_277608 (45116-44662) | |
| 541-730, gnl|hg17|chr16 (23299631-23300162) | |
| 541-730, gnl|Hg17|chr16 (23299943-23300104) | |
| 541-730, gnl|loxAfr1|scaffold_16046 (58132-57610) | |
| 541-730, gnl|mm7|chr7 (117842332-117842826) | |
| 541-730, gnl|panTro1|chr18 (23915944-23916474) | |
| 541-730, gnl|rheMac2|chr20 (21876758-21877299) | |
| 541-730, gnl|rn3|chr1 (180887533-180888030) |
| Aligned organism(s): 24 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-323, gnl|bosTau2|chr25 (19558223-19558543) | |
| 1-323, gnl|Hg17|chr16 (23299366-23299733) | |
| 1-323, gnl|Mm7|chr7 (117842067-117842384) | |
| 362-512, gnl|bosTau2|chr25 (19558538-19558688) | |
| 362-512, gnl|canFam2|chr6 (25463924-25463342) | |
| 362-512, gnl|echTel1|scaffold_277608 (45116-44662) | |
| 362-512, gnl|hg17|chr16 (23299631-23300162) | |
| 362-512, gnl|Hg17|chr16 (23299728-23299893) | |
| 362-512, gnl|loxAfr1|scaffold_16046 (58132-57610) | |
| 362-512, gnl|mm7|chr7 (117842332-117842826) | |
| 362-512, gnl|Mm7|chr7 (117842379-117842575) | |
| 362-512, gnl|panTro1|chr18 (23915944-23916474) | |
| 362-512, gnl|rheMac2|chr20 (21876758-21877299) | |
| 362-512, gnl|rn3|chr1 (180887533-180888030) | |
| 541-730, gnl|bosTau2|chr25 (19558741-19558926) | |
| 541-730, gnl|canFam2|chr6 (25463924-25463342) | |
| 541-730, gnl|echTel1|scaffold_277608 (45116-44662) | |
| 541-730, gnl|hg17|chr16 (23299631-23300162) | |
| 541-730, gnl|Hg17|chr16 (23299943-23300104) | |
| 541-730, gnl|loxAfr1|scaffold_16046 (58132-57610) | |
| 541-730, gnl|mm7|chr7 (117842332-117842826) | |
| 541-730, gnl|panTro1|chr18 (23915944-23916474) | |
| 541-730, gnl|rheMac2|chr20 (21876758-21877299) | |
| 541-730, gnl|rn3|chr1 (180887533-180888030) |