Non-Coding RNA Search

Ss1.1-Pig1-73F08.5

Sequence:


               
               AGCCGAGTCCCAGAGACACCTTGTCAACCCTTCCCCGCTGGGGCCTGCGGCCTCCTTCCC
GTCTGTGCCCGCGGCCCCGGCCCCAGGCGTTGGGCTGCAGAGTGGGACGGGCAGTGCCCT
CACCTGCCTGTGAGCGGTAGCGTCCTGCCCAGCCCGCAGAGGACGGCCCCAGAGTGAACG
CGGCCGGGCCATGGGGACCGCACTGGTGTACCACGAGGACATGACGGCTGCGCGGCTGCT
GTGGGACGACCCCGAGTGCGAGATCGAGCGTCCTGAGCGTCTGACCACAGCTCTGGAGCG
CCTGCGGCAGCGCGGCCTGGAGCAGAGGTGCCTGCGGCTGGTAGCCCGAGAGGCCTCGGA
GGCGGAGCTGGGCCTGGTGCACAGCCCCGAGTACGTGGCCCTGTTGCGGGGAACCCAGGC
CTTGAGCACTGAGGAGCTCCAGGCCCTATCCAGACAGTTCGACGCCGTCTACTTCCATCC
GAGTACCTTCCACTGTGCCCGGTTGGCCCGCAGGGCTGCTCTGCAGCTGGTGGATGCAGT
GATGGCGGGAGTTGTGCGCAACGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AGCCGAGTCCCAGAGACACCTTGTCAACCCTTCCCCGCTGGGGCCTGCGGCCTCCTTCCC
GTCTGTGCCCGCGGCCCCGGCCCCAGGCGTTGGGCTGCAGAGTGGGACGGGCAGTGCCCT
CACCTGCCTGTGAGCGGTAGCGTCCTGCCCAGCCCGCAGAGGACGGCCCCAGAGTGAACG
CGGCCGGGCCATGGGGACCGCACTGGTGTACCACGAGGACATGACGGCTGCGCGGCTGCT
GTGGGACGACCCCGAGTGCGAGATCGAGCGTCCTGAGCGTCTGACCACAGCTCTGGAGCG
CCTGCGGCAGCGCGGCCTGGAGCAGAGGTGCCTGCGGCTGGTAGCCCGAGAGGCCTCGGA
GGCGGAGCTGGGCCTGGTGCACAGCCCCGAGTACGTGGCCCTGTTGCGGGGAACCCAGGC
CTTGAGCACTGAGGAGCTCCAGGCCCTATCCAGACAGTTCGACGCCGTCTACTTCCATCC
GAGTACCTTCCACTGTGCCCGGTTGGCCCGCAGGGCTGCTCTGCAGCTGGTGGATGCAGT
GATGGCGGGAGTTGTGCGCAACGG

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|61878941|ref|XP_587822.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|61878941|ref|XP_587822.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               29-249, gnl|bosTau2|chr5 (76012184-76012402)
               

               
               29-249, gnl|Hg17|chr22 (48992079-48991860)
               

               
               29-249, gnl|Mm7|chr15 (89210935-89210725)
               


               
               250-384, gnl|bosTau2|chr5 (76012479-76012613)
               

               
               250-384, gnl|Hg17|chr22 (48991791-48991657)
               

               
               250-384, gnl|Mm7|chr15 (89210654-89210520)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               29-249, gnl|bosTau2|chr5 (76012184-76012402)
               

               
               29-249, gnl|Hg17|chr22 (48992079-48991860)
               

               
               29-249, gnl|Mm7|chr15 (89210935-89210725)
               


               
               250-384, gnl|bosTau2|chr5 (76012479-76012613)
               

               
               250-384, gnl|Hg17|chr22 (48991791-48991657)
               

               
               250-384, gnl|Mm7|chr15 (89210654-89210520)

	29-249, gnl\|bosTau2\|chr5 (76012184-76012402)
	29-249, gnl\|Hg17\|chr22 (48992079-48991860)
	29-249, gnl\|Mm7\|chr15 (89210935-89210725)

	250-384, gnl\|bosTau2\|chr5 (76012479-76012613)
	250-384, gnl\|Hg17\|chr22 (48991791-48991657)
	250-384, gnl\|Mm7\|chr15 (89210654-89210520)