Ss1.1-Pig1-73H06.5
|
TTGAATAAACAGTCACAGCCATGGCGACCCATGTCTTCATATTCACCTAGTGGATGGGTG
TGTCCCCAGGCCCACTTCTCCCAGCGCACACCTTCTGTGTTTGTGCAAGGCCTGGACCAG
GGCTGTCTTCTTCAGCTCAGTGGCTTGGCTTCCAGGCTCTGGCCTTCTGCTTCTGCCTCT
GGGGAGGTCCTGCAGCTCCTTCAGGGCTCCAGGCACTGGCCTGTCTGCTGTCCCTGGTCT
GTGGGGGCCCCTGGGCAAGCCTGGCTCAGAGCTGGTTGAGCGCATAGGCTCGGGCTGCAC
TGAGGGCAGCCTCCAGATCGGCAGTGCTTCCGGTGCCCTGGGCCACCACCCGAGAGCCCC
AGGCCTTGCCCCCCATGTGGCTGCACACAGCCAGTGCCCAGGCCTCTGCTGTGAAGGCTG
GCGTGGCGCTCTGGGCCACCTGACAGGCACACAGCACCTGCCCCAGAGGCTGAGGGCTGA
GTAGCAGCACAGACGTGCTGGGCGCCTGCTTACATAGCTGCCGGACCACCTTCACCAGCA
TCGAGAGGGACTCAGCAGAAACCGTGTCCACAATCAGGGGCCCCTCCGAGTGCCGCTGTA
GCAACTCCTGGGTTTTCAGTACAGCCTGCCCCATTTCCAGCTTCCGGATGGCGGTGTTGG
CACGCCGCTGCAGCGCCTTCAGTGTGGCCTGAAGCTCCCGCCGCTGCCACTGGGGCATGA
CAGAGGTGTCCACGGCGTCTGTGAGTCGTCCCATGTCCTTGGACAGCCGCTGCGCCTCCA
CCACATCCCGGCTGCCCCGACTCAGCCGCTCCGCAGCCGCTTCTACCTCCTGGGCCAGGC
TCTGGCCCACCTCTCGGGCCTGCCGGGCCTGCTCCCCAGTGATGGCCAGCAGGCGGGTGG |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TTGAATAAACAGTCACAGCCATGGCGACCCATGTCTTCATATTCACCTAGTGGATGGGTG
TGTCCCCAGGCCCACTTCTCCCAGCGCACACCTTCTGTGTTTGTGCAAGGCCTGGACCAG
GGCTGTCTTCTTCAGCTCAGTGGCTTGGCTTCCAGGCTCTGGCCTTCTGCTTCTGCCTCT
GGGGAGGTCCTGCAGCTCCTTCAGGGCTCCAGGCACTGGCCTGTCTGCTGTCCCTGGTCT
GTGGGGGCCCCTGGGCAAGCCTGGCTCAGAGCTGGTTGAGCGCATAGGCTCGGGCTGCAC
TGAGGGCAGCCTCCAGATCGGCAGTGCTTCCGGTGCCCTGGGCCACCACCCGAGAGCCCC
AGGCCTTGCCCCCCATGTGGCTGCACACAGCCAGTGCCCAGGCCTCTGCTGTGAAGGCTG
GCGTGGCGCTCTGGGCCACCTGACAGGCACACAGCACCTGCCCCAGAGGCTGAGGGCTGA
GTAGCAGCACAGACGTGCTGGGCGCCTGCTTACATAGCTGCCGGACCACCTTCACCAGCA
TCGAGAGGGACTCAGCAGAAACCGTGTCCACAATCAGGGGCCCCTCCGAGTGCCGCTGTA
GCAACTCCTGGGTTTTCAGTACAGCCTGCCCCATTTCCAGCTTCCGGATGGCGGTGTTGG
CACGCCGCTGCAGCGCCTTCAGTGTGGCCTGAAGCTCCCGCCGCTGCCACTGGGGCATGA
CAGAGGTGTCCACGGCGTCTGTGAGTCGTCCCATGTCCTTGGACAGCCGCTGCGCCTCCA
CCACATCCCGGCTGCCCCGACTCAGCCGCTCCGCAGCCGCTTCTACCTCCTGGGCCAGGC
TCTGGCCCACCTCTCGGGCCTGCCGGGCCTGCTCCCCAGTGATGGCCAGCAGGCGGGTGG |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-435, gnl|bosTau2|chr23 (17506693-17506255) |
|
1-435, gnl|Hg17|chr6 (44376006-44376431) |
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1-435, gnl|Mm7|chr17 (43650090-43649678) |
| |
|
736-867, gnl|bosTau2|chr23 (17504675-17504544) |
|
736-867, gnl|canFam2|chr12 (15711564-15711656) |
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736-867, gnl|echTel1|scaffold_203859 (3009-2917) |
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736-867, gnl|galGal2|chr3 (26536298-26536203) |
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736-867, gnl|hg17|chr6 (44378096-44378188) |
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736-867, gnl|Hg17|chr6 (44378105-44378236) |
|
736-867, gnl|mm7|chr17 (43648077-43647984) |
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736-867, gnl|Mm7|chr17 (43648065-43647935) |
|
736-867, gnl|monDom2|scaffold_0 (196488790-196488698) |
|
736-867, gnl|panTro1|chr5 (44986755-44986847) |
|
736-867, gnl|rheMac2|chr4 (44221794-44221886) |
|
736-867, gnl|rn3|chr9 (11084739-11084832) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-435, gnl|bosTau2|chr23 (17506693-17506255) |
|
1-435, gnl|Hg17|chr6 (44376006-44376431) |
|
1-435, gnl|Mm7|chr17 (43650090-43649678) |
| |
|
736-867, gnl|bosTau2|chr23 (17504675-17504544) |
|
736-867, gnl|canFam2|chr12 (15711564-15711656) |
|
736-867, gnl|echTel1|scaffold_203859 (3009-2917) |
|
736-867, gnl|galGal2|chr3 (26536298-26536203) |
|
736-867, gnl|hg17|chr6 (44378096-44378188) |
|
736-867, gnl|Hg17|chr6 (44378105-44378236) |
|
736-867, gnl|mm7|chr17 (43648077-43647984) |
|
736-867, gnl|Mm7|chr17 (43648065-43647935) |
|
736-867, gnl|monDom2|scaffold_0 (196488790-196488698) |
|
736-867, gnl|panTro1|chr5 (44986755-44986847) |
|
736-867, gnl|rheMac2|chr4 (44221794-44221886) |
|
736-867, gnl|rn3|chr9 (11084739-11084832) |
