Ss1.1-Pig1-74A23.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GTCCCAGCACCGCGCTCCCGCCGGCAACATGGCGGTCCTTGGAGTGCAGCTGGTGGTGAC GCTGCTCACCGCCACCCTCATGCACAGGCTGGCCCCACACTGCTCCTTCGCGCGCTGGCT GCTCTGCAATGGCAGTCTCTTCCGATACAAGCACCCTTCCGAGGAAGAACTTCGGGCCCT GGCAGGGAAGCAGAGACCCAGAGGCAGGAAGGAGCGATGGGCCAATGGCTACAGTGAGGA GAAGCCGTTATCTGTGCCTCGAGACACCCCATTCCAGCTGGAGACCTGCCCCCTCACAGC TGTTGATGCCCTTGTCCTGCGCTTCTTCCTGGAGTACCAGTGGTTTGTGGACTTTGCGGT GTACTCGGGTGGCGTGTACCTCTTTACAGAGGCCTACTACTACATGCTGGGCCCGGCCAA GGAGACCAACATTGCAGTGTTCTGGTGCCTGCTCACCATCGCCTTCTCTATCAAGGTGTT CCTGACGGTGACCCGGCTGTACTTCAGTGCAGAAGAGGGAGGCGAGCGCTCCGTCTGCCT CACCTTCGCCTTTCTGTTTCTGCTCCTGGCCATGCTGGTGCAGGTGGTGCGGGAGGAGAC ACTCGAGCTGGGCCTGGAGCCAGGCCTGGACAGTATGACCCAGAACTTGGAGCCACTACT GAAGACACAAGACTGGGACTGGGCTCTCCCGCTGGTCAAGCTGGTCAT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GTCCCAGCACCGCGCTCCCGCCGGCAACATGGCGGTCCTTGGAGTGCAGCTGGTGGTGAC GCTGCTCACCGCCACCCTCATGCACAGGCTGGCCCCACACTGCTCCTTCGCGCGCTGGCT GCTCTGCAATGGCAGTCTCTTCCGATACAAGCACCCTTCCGAGGAAGAACTTCGGGCCCT GGCAGGGAAGCAGAGACCCAGAGGCAGGAAGGAGCGATGGGCCAATGGCTACAGTGAGGA GAAGCCGTTATCTGTGCCTCGAGACACCCCATTCCAGCTGGAGACCTGCCCCCTCACAGC TGTTGATGCCCTTGTCCTGCGCTTCTTCCTGGAGTACCAGTGGTTTGTGGACTTTGCGGT GTACTCGGGTGGCGTGTACCTCTTTACAGAGGCCTACTACTACATGCTGGGCCCGGCCAA GGAGACCAACATTGCAGTGTTCTGGTGCCTGCTCACCATCGCCTTCTCTATCAAGGTGTT CCTGACGGTGACCCGGCTGTACTTCAGTGCAGAAGAGGGAGGCGAGCGCTCCGTCTGCCT CACCTTCGCCTTTCTGTTTCTGCTCCTGGCCATGCTGGTGCAGGTGGTGCGGGAGGAGAC ACTCGAGCTGGGCCTGGAGCCAGGCCTGGACAGTATGACCCAGAACTTGGAGCCACTACT GAAGACACAAGACTGGGACTGGGCTCTCCCGCTGGTCAAGCTGGTCAT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 462-619, + strand, RNAz p=0.586087 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 462-619, + strand, RNAz p=0.586087 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 31-135, gnl|bosTau2|chr7 (2583066-2582962) | |
| 31-135, gnl|canFam2|chr20 (47027670-47027537) | |
| 31-135, gnl|danRer3|chr22 (25202631-25202524) | |
| 31-135, gnl|dasNov1|scaffold_75095 (8824-8725) | |
| 31-135, gnl|fr1|chrUn (251218704-251218568) | |
| 31-135, gnl|hg17|chr19 (19106589-19106722) | |
| 31-135, gnl|Hg17|chr19 (19106697-19106593) | |
| 31-135, gnl|loxAfr1|scaffold_182825 (1050-1176) | |
| 31-135, gnl|mm7|chr8 (68629616-68629496) | |
| 31-135, gnl|Mm7|chr8 (68629506-68629610) | |
| 31-135, gnl|monDom2|scaffold_75 (1973993-1974113) | |
| 31-135, gnl|oryCun1|scaffold_122661 (383-516) | |
| 31-135, gnl|rheMac2|chr19 (18774552-18774685) | |
| 31-135, gnl|rn3|chr16 (19729082-19729201) | |
| 31-135, gnl|tetNig1|chr1_random (3369796-3369906) | |
| 31-135, gnl|xenTro1|scaffold_153 (244787-244674) | |
| 462-624, gnl|bosTau2|chr7 (2580022-2579860) | |
| 462-624, gnl|canFam2|chr20 (47031498-47031288) | |
| 462-624, gnl|danRer3|chr22 (25205273-25205095) | |
| 462-624, gnl|fr1|chrUn (251219574-251219390) | |
| 462-624, gnl|hg17|chr19 (19101941-19102149) | |
| 462-624, gnl|Hg17|chr19 (19102128-19101964) | |
| 462-624, gnl|mm7|chr8 (68634229-68634049) | |
| 462-624, gnl|Mm7|chr8 (68634060-68634223) | |
| 462-624, gnl|monDom2|scaffold_75 (1970321-1970533) | |
| 462-624, gnl|panTro1|chr20 (20176207-20176415) | |
| 462-624, gnl|rheMac2|chr19 (18770087-18770295) | |
| 462-624, gnl|rn3|chr16 (19725012-19725199) | |
| 462-624, gnl|tetNig1|chr1_random (3368918-3369098) | |
| 462-624, gnl|xenTro1|scaffold_153 (246486-246322) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 31-135, gnl|bosTau2|chr7 (2583066-2582962) | |
| 31-135, gnl|canFam2|chr20 (47027670-47027537) | |
| 31-135, gnl|danRer3|chr22 (25202631-25202524) | |
| 31-135, gnl|dasNov1|scaffold_75095 (8824-8725) | |
| 31-135, gnl|fr1|chrUn (251218704-251218568) | |
| 31-135, gnl|hg17|chr19 (19106589-19106722) | |
| 31-135, gnl|Hg17|chr19 (19106697-19106593) | |
| 31-135, gnl|loxAfr1|scaffold_182825 (1050-1176) | |
| 31-135, gnl|mm7|chr8 (68629616-68629496) | |
| 31-135, gnl|Mm7|chr8 (68629506-68629610) | |
| 31-135, gnl|monDom2|scaffold_75 (1973993-1974113) | |
| 31-135, gnl|oryCun1|scaffold_122661 (383-516) | |
| 31-135, gnl|rheMac2|chr19 (18774552-18774685) | |
| 31-135, gnl|rn3|chr16 (19729082-19729201) | |
| 31-135, gnl|tetNig1|chr1_random (3369796-3369906) | |
| 31-135, gnl|xenTro1|scaffold_153 (244787-244674) | |
| 462-624, gnl|bosTau2|chr7 (2580022-2579860) | |
| 462-624, gnl|canFam2|chr20 (47031498-47031288) | |
| 462-624, gnl|danRer3|chr22 (25205273-25205095) | |
| 462-624, gnl|fr1|chrUn (251219574-251219390) | |
| 462-624, gnl|hg17|chr19 (19101941-19102149) | |
| 462-624, gnl|Hg17|chr19 (19102128-19101964) | |
| 462-624, gnl|mm7|chr8 (68634229-68634049) | |
| 462-624, gnl|Mm7|chr8 (68634060-68634223) | |
| 462-624, gnl|monDom2|scaffold_75 (1970321-1970533) | |
| 462-624, gnl|panTro1|chr20 (20176207-20176415) | |
| 462-624, gnl|rheMac2|chr19 (18770087-18770295) | |
| 462-624, gnl|rn3|chr16 (19725012-19725199) | |
| 462-624, gnl|tetNig1|chr1_random (3368918-3369098) | |
| 462-624, gnl|xenTro1|scaffold_153 (246486-246322) |