Ss1.1-Pig1-75M16.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGCCAGCACCGTCTTCCAGTCGGAGCAGGGCAAGAAGACCATCGACATCTACTGGCTGTT TGACGATGGAGGCCTCACCCTCCTGGTCCCCTATCTCCTCGGCCGGAAGAAGCGATGGAG TAAATGCAGGATCCGCGTGTTCGTTGGGGGCCAGATCAACAGGATGGACCAGGAAAGAGA AGGCGATCATTTCTCTGCTGAGCAAGTTCCGGTTGAGATTCCACGAAGTTCACGTCCTTC CTGACATCAACCAGAAGCCACGGGCTGAGCACACCAAGCGGTTTGAGGACATGGTCGCAC CCTTCCGCCTGAATGATGGCTTCAAGGATGAGGCCACCGTCAGCGAGATGAGGCGGGACT GCCCCTGGAAGATCTCGGACGAAGAGATTAACAAGAATAGAATCAAGTCCCTTCGGCAGG TGAGGCTGAACGAGATTCTGCTGGATTACTCCCGGGACGCCGCTCTGGTCGTCGTCACCT TGCCCATAGGGAGGCAGGGCAAGTGCCCGAGCTCGCTCTACATGGCCTGGCTGGAGACGC TGTCCCAGGACC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGCCAGCACCGTCTTCCAGTCGGAGCAGGGCAAGAAGACCATCGACATCTACTGGCTGTT TGACGATGGAGGCCTCACCCTCCTGGTCCCCTATCTCCTCGGCCGGAAGAAGCGATGGAG TAAATGCAGGATCCGCGTGTTCGTTGGGGGCCAGATCAACAGGATGGACCAGGAAAGAGA AGGCGATCATTTCTCTGCTGAGCAAGTTCCGGTTGAGATTCCACGAAGTTCACGTCCTTC CTGACATCAACCAGAAGCCACGGGCTGAGCACACCAAGCGGTTTGAGGACATGGTCGCAC CCTTCCGCCTGAATGATGGCTTCAAGGATGAGGCCACCGTCAGCGAGATGAGGCGGGACT GCCCCTGGAAGATCTCGGACGAAGAGATTAACAAGAATAGAATCAAGTCCCTTCGGCAGG TGAGGCTGAACGAGATTCTGCTGGATTACTCCCGGGACGCCGCTCTGGTCGTCGTCACCT TGCCCATAGGGAGGCAGGGCAAGTGCCCGAGCTCGCTCTACATGGCCTGGCTGGAGACGC TGTCCCAGGACC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 70-185, + strand, RNAz p=0.938432 | |
| 312-407, - strand, RNAz p=0.639628 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 70-185, + strand, RNAz p=0.938432 | |
| 312-407, - strand, RNAz p=0.639628 |
| Aligned organism(s): 21 entry(ies) | More info |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
| 70-185, gnl|bosTau2|chr29 (9389152-9389038) | |
| 70-185, gnl|Hg17|chr16 (55485942-55486056) | |
| 70-185, gnl|Mm7|chr8 (92942052-92942166) | |
| 272-407, gnl|bosTau2|chr29 (9383340-9383205) | |
| 272-407, gnl|canFam2|chr2 (62300860-62300689) | |
| 272-407, gnl|danRer3|chr18 (18770788-18770928) | |
| 272-407, gnl|dasNov1|scaffold_74380 (3424-3255) | |
| 272-407, gnl|echTel1|scaffold_197929 (3370-3531) | |
| 272-407, gnl|fr1|chrUn (220151858-220151999) | |
| 272-407, gnl|galGal2|chr11 (1938873-1938697) | |
| 272-407, gnl|hg17|chr16 (55493766-55493940) | |
| 272-407, gnl|Hg17|chr16 (55493786-55493921) | |
| 272-407, gnl|loxAfr1|scaffold_40278 (2560-2370) | |
| 272-407, gnl|mm7|chr8 (92946036-92946209) | |
| 272-407, gnl|Mm7|chr8 (92946054-92946189) | |
| 272-407, gnl|monDom2|scaffold_35 (23615058-23615229) | |
| 272-407, gnl|panTro1|chr18 (49586702-49586876) | |
| 272-407, gnl|rheMac2|chr20 (55257782-55257957) | |
| 272-407, gnl|rn3|chr19 (11084981-11084807) | |
| 272-407, gnl|tetNig1|chrUn_random (35741197-35741360) | |
| 272-407, gnl|xenTro1|scaffold_180 (28733-28574) |
| Aligned organism(s): 21 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 70-185, gnl|bosTau2|chr29 (9389152-9389038) | |
| 70-185, gnl|Hg17|chr16 (55485942-55486056) | |
| 70-185, gnl|Mm7|chr8 (92942052-92942166) | |
| 272-407, gnl|bosTau2|chr29 (9383340-9383205) | |
| 272-407, gnl|canFam2|chr2 (62300860-62300689) | |
| 272-407, gnl|danRer3|chr18 (18770788-18770928) | |
| 272-407, gnl|dasNov1|scaffold_74380 (3424-3255) | |
| 272-407, gnl|echTel1|scaffold_197929 (3370-3531) | |
| 272-407, gnl|fr1|chrUn (220151858-220151999) | |
| 272-407, gnl|galGal2|chr11 (1938873-1938697) | |
| 272-407, gnl|hg17|chr16 (55493766-55493940) | |
| 272-407, gnl|Hg17|chr16 (55493786-55493921) | |
| 272-407, gnl|loxAfr1|scaffold_40278 (2560-2370) | |
| 272-407, gnl|mm7|chr8 (92946036-92946209) | |
| 272-407, gnl|Mm7|chr8 (92946054-92946189) | |
| 272-407, gnl|monDom2|scaffold_35 (23615058-23615229) | |
| 272-407, gnl|panTro1|chr18 (49586702-49586876) | |
| 272-407, gnl|rheMac2|chr20 (55257782-55257957) | |
| 272-407, gnl|rn3|chr19 (11084981-11084807) | |
| 272-407, gnl|tetNig1|chrUn_random (35741197-35741360) | |
| 272-407, gnl|xenTro1|scaffold_180 (28733-28574) |