Non-Coding RNA Search

Ss1.1-Pig1-76D19.5

Sequence:


               
               TTGGATACCAGTGAGTTCCAGGTGCAGGCACCAGTCCGCGGGGCCCTGGGAAGAGTGTAC
CCAGGCAGCAGGGCCTCAGAGAAGCACAGCCCTGACAGCGCCTGCTCTGTGGACTTCAGC
AGCAGTCGCCTTTCCAGCCCTGAGCATCCCACGGAAGACTCTGAGAGCACTGAGCCCCTG
AGTGTGGATGGCATTTCCTCAGACCTTGAAGAGCCAGCCGAGGGTGATGAGGAAGAGGAG
GAAGAGGAGGGAGGCCCTGGCCCCTATGGGCTGCAGGAAGGCAGTCCTCGGACCCCCGAC
CAGGAGCAGTTTCTAAAACAGCACTTTGAGACGCTGGCCAATGGGGCTGCTCCAGGGGGC
CCAGTCCGGGTAGCAGAGCGGACAGAGTCTCGGAGCATCTCTTCCCGATTCTTGTTGCAA
GTGCAGACCCCCCCACTCAGGGAACTGTCCCCACCTTCCTCAAGCCTGGCACAGACGTTG
AGACCAGTGCAGGTGCCCCGGACTCCTGATGAGCAGCGAAGAGGCAATGGTGCCAGTCCT
CCAGGAGCACCCCCAGAGGCAGGGCCATCACCTGGGAACCCCGGCCTGCAGCAGGCAGCC
CCTGTGCTCTTGCCACGCCGCCGCCTCAACCTGGACAGTAGCTGGGCCCCCAAGAGGGTG
GCCACAACCACCTCCTCAGGGGGCCTCCAGAAAGCCCAGTCCGTGCAAAGTCTGGTGCCA
CAGGATGAAGCCCCTCCACCAGGCCCATGGCTCTTACAGGAGATGGAGGCCCAGGGGCGC
CTGCGCTCCCTGCCCCACACTGATGGCCGTTTGTCTCGGCCCCGCTCCTACCAGAACCCC
ACCACCAGTTCCATGGCCAAGATATCCCGCAGCATCTCCGTTGGGGAGAACCTCAGCCTG
GCTGCCGAACCTCAAGCTCCTGCCCCAGTCCGAGTC

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTGGATACCAGTGAGTTCCAGGTGCAGGCACCAGTCCGCGGGGCCCTGGGAAGAGTGTAC
CCAGGCAGCAGGGCCTCAGAGAAGCACAGCCCTGACAGCGCCTGCTCTGTGGACTTCAGC
AGCAGTCGCCTTTCCAGCCCTGAGCATCCCACGGAAGACTCTGAGAGCACTGAGCCCCTG
AGTGTGGATGGCATTTCCTCAGACCTTGAAGAGCCAGCCGAGGGTGATGAGGAAGAGGAG
GAAGAGGAGGGAGGCCCTGGCCCCTATGGGCTGCAGGAAGGCAGTCCTCGGACCCCCGAC
CAGGAGCAGTTTCTAAAACAGCACTTTGAGACGCTGGCCAATGGGGCTGCTCCAGGGGGC
CCAGTCCGGGTAGCAGAGCGGACAGAGTCTCGGAGCATCTCTTCCCGATTCTTGTTGCAA
GTGCAGACCCCCCCACTCAGGGAACTGTCCCCACCTTCCTCAAGCCTGGCACAGACGTTG
AGACCAGTGCAGGTGCCCCGGACTCCTGATGAGCAGCGAAGAGGCAATGGTGCCAGTCCT
CCAGGAGCACCCCCAGAGGCAGGGCCATCACCTGGGAACCCCGGCCTGCAGCAGGCAGCC
CCTGTGCTCTTGCCACGCCGCCGCCTCAACCTGGACAGTAGCTGGGCCCCCAAGAGGGTG
GCCACAACCACCTCCTCAGGGGGCCTCCAGAAAGCCCAGTCCGTGCAAAGTCTGGTGCCA
CAGGATGAAGCCCCTCCACCAGGCCCATGGCTCTTACAGGAGATGGAGGCCCAGGGGCGC
CTGCGCTCCCTGCCCCACACTGATGGCCGTTTGTCTCGGCCCCGCTCCTACCAGAACCCC
ACCACCAGTTCCATGGCCAAGATATCCCGCAGCATCTCCGTTGGGGAGAACCTCAGCCTG
GCTGCCGAACCTCAAGCTCCTGCCCCAGTCCGAGTC

Coded protein: 1 entry(ies)

More info

Coded protein: 1 entry(ies)

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               gi|55642821|ref|XP_510635.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|55642821|ref|XP_510635.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               156-356, gnl|bosTau2|chr10 (25128369-25128169)
               

               
               156-356, gnl|Hg17|chr15 (39901713-39901913)
               

               
               156-356, gnl|Mm7|chr2 (119763184-119763381)
               


               
               724-932, gnl|bosTau2|chr10 (25127433-25127225)
               

               
               724-932, gnl|Hg17|chr15 (39902958-39903162)
               

               
               724-932, gnl|Mm7|chr2 (119764391-119764599)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               156-356, gnl|bosTau2|chr10 (25128369-25128169)
               

               
               156-356, gnl|Hg17|chr15 (39901713-39901913)
               

               
               156-356, gnl|Mm7|chr2 (119763184-119763381)
               


               
               724-932, gnl|bosTau2|chr10 (25127433-25127225)
               

               
               724-932, gnl|Hg17|chr15 (39902958-39903162)
               

               
               724-932, gnl|Mm7|chr2 (119764391-119764599)

	156-356, gnl\|bosTau2\|chr10 (25128369-25128169)
	156-356, gnl\|Hg17\|chr15 (39901713-39901913)
	156-356, gnl\|Mm7\|chr2 (119763184-119763381)

	724-932, gnl\|bosTau2\|chr10 (25127433-25127225)
	724-932, gnl\|Hg17\|chr15 (39902958-39903162)
	724-932, gnl\|Mm7\|chr2 (119764391-119764599)