Ss1.1-Pig1-80L02.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GGGGGCCATAAAAGTCATCGACAAGAAGCGAGCCAAAAAAGACACCTATGTCACCAAAAA CCTTCGGCGAGAGGGGCAGATCCAGCAGATGATCCGCCACCCTAATATCACCCAGCTCCT CGATATCTTGGAGACGGAAAACAGCTACTACCTGGTCATGGAGTTGTGTGCTGGGGGCAA CTTGATGCACAAGATATATGAGAAGAAGCGGCTGGAGGAATCGGAAGCTCGCAGATATAT CAGGCAGCTCATCTCTGCAGTGGAGCACCTGCACCGGGCGGGGGTGGTCCACAGAGACTT GAAGATAGAAAACTTGCTGCTAGATGAAGACAATAATATCAAGCTGATTGACTTTGGTTT GAGCAACTGTGCGGGGATCCTGGGCCACTCAGACCCGTTCAGCACGCAGTGTGGCAGCCC CGCGTACGCCGCGCCCGAACTGCTGGCCAGGAAGAAATACGGCCCCAAAATCGATGTCTG GTCCATAGGTGTGAACATGTATGCCATGCTGACCGGGACCCTGCCTTTCACGGTGGAGCC CTTTAGCCTGAGGGCTCTGTACCAGAAGATGGTGGACAAGGAAATGAACCCCCTTCCCAC CCAGCTCTCCACAGGAGCCGTGAACTTCCTGCGTTCTCTTCTGGAACCGGATCCCGTGAA GAGGCCCAATATCCAGCAAGCACTGGCGAATCGCTGGCTTAATGAGAATTACACGGGCAA AGTGCCATGTAACGTCACCTATCCCAACAGGATTTCCCTGGAAGACCTGAGCCCCAGCGT GGTGCTGCACATGACCGAGAAGCTGGGCTACAAGAACAGCGACGTGATCAACACGGTGCT GTCCAACCGTGCCTGTCACATCCTCGCCATCTACTTCCTCTTAAACAAGAAGCTCGAGCG CTATCTGTCAGGGAAATCCGACATCCAGGACGGCGTCTGCTACAAGACCCAGCTCTACCA GATAGAGAGGTG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GGGGGCCATAAAAGTCATCGACAAGAAGCGAGCCAAAAAAGACACCTATGTCACCAAAAA CCTTCGGCGAGAGGGGCAGATCCAGCAGATGATCCGCCACCCTAATATCACCCAGCTCCT CGATATCTTGGAGACGGAAAACAGCTACTACCTGGTCATGGAGTTGTGTGCTGGGGGCAA CTTGATGCACAAGATATATGAGAAGAAGCGGCTGGAGGAATCGGAAGCTCGCAGATATAT CAGGCAGCTCATCTCTGCAGTGGAGCACCTGCACCGGGCGGGGGTGGTCCACAGAGACTT GAAGATAGAAAACTTGCTGCTAGATGAAGACAATAATATCAAGCTGATTGACTTTGGTTT GAGCAACTGTGCGGGGATCCTGGGCCACTCAGACCCGTTCAGCACGCAGTGTGGCAGCCC CGCGTACGCCGCGCCCGAACTGCTGGCCAGGAAGAAATACGGCCCCAAAATCGATGTCTG GTCCATAGGTGTGAACATGTATGCCATGCTGACCGGGACCCTGCCTTTCACGGTGGAGCC CTTTAGCCTGAGGGCTCTGTACCAGAAGATGGTGGACAAGGAAATGAACCCCCTTCCCAC CCAGCTCTCCACAGGAGCCGTGAACTTCCTGCGTTCTCTTCTGGAACCGGATCCCGTGAA GAGGCCCAATATCCAGCAAGCACTGGCGAATCGCTGGCTTAATGAGAATTACACGGGCAA AGTGCCATGTAACGTCACCTATCCCAACAGGATTTCCCTGGAAGACCTGAGCCCCAGCGT GGTGCTGCACATGACCGAGAAGCTGGGCTACAAGAACAGCGACGTGATCAACACGGTGCT GTCCAACCGTGCCTGTCACATCCTCGCCATCTACTTCCTCTTAAACAAGAAGCTCGAGCG CTATCTGTCAGGGAAATCCGACATCCAGGACGGCGTCTGCTACAAGACCCAGCTCTACCA GATAGAGAGGTG |
| Coded protein: 1 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | More info |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
| 1-294, gnl|bosTau2|chr1 (3093179-3093472) | |
| 1-294, gnl|canFam2|chr31 (29786620-29786956) | |
| 1-294, gnl|danRer3|chr5 (40330733-40331046) | |
| 1-294, gnl|dasNov1|scaffold_21296 (51392-51050) | |
| 1-294, gnl|echTel1|scaffold_243188 (5879-5535) | |
| 1-294, gnl|fr1|chrUn (133401886-133402189) | |
| 1-294, gnl|galGal2|chr1 (98502717-98503024) | |
| 1-294, gnl|hg17|chr21 (32218641-32218984) | |
| 1-294, gnl|Hg17|chr21 (32218650-32218943) | |
| 1-294, gnl|loxAfr1|scaffold_3505 (7136-6794) | |
| 1-294, gnl|mm7|chr16 (90482430-90482772) | |
| 1-294, gnl|Mm7|chr16 (90482440-90482733) | |
| 1-294, gnl|monDom2|scaffold_29 (16240777-16240464) | |
| 1-294, gnl|oryCun1|scaffold_202646 (56338-55991) | |
| 1-294, gnl|rheMac2|chr3 (14588220-14587877) | |
| 1-294, gnl|rn3|chr11 (29574881-29574540) | |
| 1-294, gnl|tetNig1|chr7 (2969920-2969603) | |
| 1-294, gnl|xenTro1|scaffold_390 (581740-582038) | |
| 482-615, gnl|bosTau2|chr1 (3130858-3130991) | |
| 482-615, gnl|canFam2|chr31 (29818658-29818807) | |
| 482-615, gnl|danRer3|chr5 (40331791-40331935) | |
| 482-615, gnl|echTel1|scaffold_318981 (42565-42416) | |
| 482-615, gnl|fr1|chrUn (133402977-133403122) | |
| 482-615, gnl|galGal2|chr1 (98518285-98518430) | |
| 482-615, gnl|hg17|chr21 (32253014-32253163) | |
| 482-615, gnl|Hg17|chr21 (32253021-32253154) | |
| 482-615, gnl|loxAfr1|scaffold_2277 (71558-71702) | |
| 482-615, gnl|mm7|chr16 (90514056-90514205) | |
| 482-615, gnl|Mm7|chr16 (90514063-90514196) | |
| 482-615, gnl|monDom2|scaffold_29 (16206699-16206542) | |
| 482-615, gnl|oryCun1|scaffold_202646 (25960-25811) | |
| 482-615, gnl|panTro1|chr22 (32224152-32224301) | |
| 482-615, gnl|rheMac2|chr3 (14553116-14552967) | |
| 482-615, gnl|rn3|chr11 (29543718-29543569) | |
| 482-615, gnl|tetNig1|chr7 (2968763-2968626) | |
| 482-615, gnl|xenTro1|scaffold_390 (589570-589713) | |
| 748-913, gnl|bosTau2|chr1 (3149485-3149650) | |
| 748-913, gnl|canFam2|chr31 (29830429-29830601) | |
| 748-913, gnl|danRer3|chr5 (40333017-40333181) | |
| 748-913, gnl|dasNov1|scaffold_140590 (219-44) | |
| 748-913, gnl|echTel1|scaffold_172559 (13337-13509) | |
| 748-913, gnl|fr1|chrUn (133403746-133403918) | |
| 748-913, gnl|galGal2|chr1 (98528919-98529097) | |
| 748-913, gnl|hg17|chr21 (32268720-32268898) | |
| 748-913, gnl|Hg17|chr21 (32268735-32268900) | |
| 748-913, gnl|mm7|chr16 (90525729-90525907) | |
| 748-913, gnl|Mm7|chr16 (90525744-90525909) | |
| 748-913, gnl|monDom2|scaffold_29 (16189399-16189225) | |
| 748-913, gnl|oryCun1|scaffold_202646 (15975-15796) | |
| 748-913, gnl|panTro1|chr22 (32240020-32240198) | |
| 748-913, gnl|rheMac2|chr3 (14537129-14536951) | |
| 748-913, gnl|rn3|chr11 (29531802-29531624) | |
| 748-913, gnl|tetNig1|chr7 (2967999-2967832) | |
| 748-913, gnl|xenTro1|scaffold_390 (593883-594061) |
| Aligned organism(s): 54 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-294, gnl|bosTau2|chr1 (3093179-3093472) | |
| 1-294, gnl|canFam2|chr31 (29786620-29786956) | |
| 1-294, gnl|danRer3|chr5 (40330733-40331046) | |
| 1-294, gnl|dasNov1|scaffold_21296 (51392-51050) | |
| 1-294, gnl|echTel1|scaffold_243188 (5879-5535) | |
| 1-294, gnl|fr1|chrUn (133401886-133402189) | |
| 1-294, gnl|galGal2|chr1 (98502717-98503024) | |
| 1-294, gnl|hg17|chr21 (32218641-32218984) | |
| 1-294, gnl|Hg17|chr21 (32218650-32218943) | |
| 1-294, gnl|loxAfr1|scaffold_3505 (7136-6794) | |
| 1-294, gnl|mm7|chr16 (90482430-90482772) | |
| 1-294, gnl|Mm7|chr16 (90482440-90482733) | |
| 1-294, gnl|monDom2|scaffold_29 (16240777-16240464) | |
| 1-294, gnl|oryCun1|scaffold_202646 (56338-55991) | |
| 1-294, gnl|rheMac2|chr3 (14588220-14587877) | |
| 1-294, gnl|rn3|chr11 (29574881-29574540) | |
| 1-294, gnl|tetNig1|chr7 (2969920-2969603) | |
| 1-294, gnl|xenTro1|scaffold_390 (581740-582038) | |
| 482-615, gnl|bosTau2|chr1 (3130858-3130991) | |
| 482-615, gnl|canFam2|chr31 (29818658-29818807) | |
| 482-615, gnl|danRer3|chr5 (40331791-40331935) | |
| 482-615, gnl|echTel1|scaffold_318981 (42565-42416) | |
| 482-615, gnl|fr1|chrUn (133402977-133403122) | |
| 482-615, gnl|galGal2|chr1 (98518285-98518430) | |
| 482-615, gnl|hg17|chr21 (32253014-32253163) | |
| 482-615, gnl|Hg17|chr21 (32253021-32253154) | |
| 482-615, gnl|loxAfr1|scaffold_2277 (71558-71702) | |
| 482-615, gnl|mm7|chr16 (90514056-90514205) | |
| 482-615, gnl|Mm7|chr16 (90514063-90514196) | |
| 482-615, gnl|monDom2|scaffold_29 (16206699-16206542) | |
| 482-615, gnl|oryCun1|scaffold_202646 (25960-25811) | |
| 482-615, gnl|panTro1|chr22 (32224152-32224301) | |
| 482-615, gnl|rheMac2|chr3 (14553116-14552967) | |
| 482-615, gnl|rn3|chr11 (29543718-29543569) | |
| 482-615, gnl|tetNig1|chr7 (2968763-2968626) | |
| 482-615, gnl|xenTro1|scaffold_390 (589570-589713) | |
| 748-913, gnl|bosTau2|chr1 (3149485-3149650) | |
| 748-913, gnl|canFam2|chr31 (29830429-29830601) | |
| 748-913, gnl|danRer3|chr5 (40333017-40333181) | |
| 748-913, gnl|dasNov1|scaffold_140590 (219-44) | |
| 748-913, gnl|echTel1|scaffold_172559 (13337-13509) | |
| 748-913, gnl|fr1|chrUn (133403746-133403918) | |
| 748-913, gnl|galGal2|chr1 (98528919-98529097) | |
| 748-913, gnl|hg17|chr21 (32268720-32268898) | |
| 748-913, gnl|Hg17|chr21 (32268735-32268900) | |
| 748-913, gnl|mm7|chr16 (90525729-90525907) | |
| 748-913, gnl|Mm7|chr16 (90525744-90525909) | |
| 748-913, gnl|monDom2|scaffold_29 (16189399-16189225) | |
| 748-913, gnl|oryCun1|scaffold_202646 (15975-15796) | |
| 748-913, gnl|panTro1|chr22 (32240020-32240198) | |
| 748-913, gnl|rheMac2|chr3 (14537129-14536951) | |
| 748-913, gnl|rn3|chr11 (29531802-29531624) | |
| 748-913, gnl|tetNig1|chr7 (2967999-2967832) | |
| 748-913, gnl|xenTro1|scaffold_390 (593883-594061) |