Non-Coding RNA Search

Ss1.1-Pig1-82K17.5

Sequence:


               
               CCGTAAGAACAATATTTTCCTGTATGGCTGTAGTAACAACGATCGCAATTTCTGGCTTCA
TGAGCGAGTCTTTCCTTTAATGTTAAGCAAAAATGCACCAGATAAGTTCTCTTTTCATAG
TTGTAATTTTAAAGTCCAAAAGTGTAAAGAAGGAACAGGGCGAGTTGTGATGTGGCGGAT
GGGGATCCTGAACAGCTATACCATGGAGTCTACCTTTGGCGGGTCCACTCTGGGCAATAA
AAGAGACACTCACTTTACCACTGAGGATCTGACGTCTCTAGGTTATCATGTCTGTGACAC
CCTTCTGGATTTCTGTGATCCTGACCGAACCAAGTTCATGCAGTGTCTAGCAGAGCTTAA
AGAGCTCTTACAACAGGAAATCCATAAGAAATTCAAAGAATTTGGACAAGATATGGATTT
AGAAGGAAGTTGGTATTTCCCTTTTTCCTTTCCTTTGGGAAACAGCACCAGTGGTTCTGA
CAGCTCCCTGTCCGATGGGCTTCCTGTCCACCTGCTGAACATAGCAAATGAGGTGAGATT
ACAGAGACTCTTACATCCAGGAAGGAGCAGCCTTTAAAAAGCTTGGCACTGCTGGCTAAT
ACGGGGGAATTTTCAATCATCTTCAGATCTATAGAAAATGTAACAGTAGCATCCTAACTG
GCTGCCTTGCCTTGGGTTGTTCATTTTGTCCTTTATAACTTTGTTTTTTAAATCTGGGGC
GGGGGAGTGAGGACTCCATTTTTATTACGAAGTTACCTAAAAGTGGGGGTTGGGAGAAGG
TTAAAAAGTTTAACATTCTCATGT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               CCGTAAGAACAATATTTTCCTGTATGGCTGTAGTAACAACGATCGCAATTTCTGGCTTCA
TGAGCGAGTCTTTCCTTTAATGTTAAGCAAAAATGCACCAGATAAGTTCTCTTTTCATAG
TTGTAATTTTAAAGTCCAAAAGTGTAAAGAAGGAACAGGGCGAGTTGTGATGTGGCGGAT
GGGGATCCTGAACAGCTATACCATGGAGTCTACCTTTGGCGGGTCCACTCTGGGCAATAA
AAGAGACACTCACTTTACCACTGAGGATCTGACGTCTCTAGGTTATCATGTCTGTGACAC
CCTTCTGGATTTCTGTGATCCTGACCGAACCAAGTTCATGCAGTGTCTAGCAGAGCTTAA
AGAGCTCTTACAACAGGAAATCCATAAGAAATTCAAAGAATTTGGACAAGATATGGATTT
AGAAGGAAGTTGGTATTTCCCTTTTTCCTTTCCTTTGGGAAACAGCACCAGTGGTTCTGA
CAGCTCCCTGTCCGATGGGCTTCCTGTCCACCTGCTGAACATAGCAAATGAGGTGAGATT
ACAGAGACTCTTACATCCAGGAAGGAGCAGCCTTTAAAAAGCTTGGCACTGCTGGCTAAT
ACGGGGGAATTTTCAATCATCTTCAGATCTATAGAAAATGTAACAGTAGCATCCTAACTG
GCTGCCTTGCCTTGGGTTGTTCATTTTGTCCTTTATAACTTTGTTTTTTAAATCTGGGGC
GGGGGAGTGAGGACTCCATTTTTATTACGAAGTTACCTAAAAGTGGGGGTTGGGAGAAGG
TTAAAAAGTTTAACATTCTCATGT

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|10440340|dbj|BAB15707.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|10440340|dbj|BAB15707.1|

Aligned organism(s): 6 entry(ies)

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Aligned organism(s): 6 entry(ies)

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               105-237, gnl|bosTau2|chr15 (48685897-48686029)
               

               
               105-237, gnl|Hg17|chr11 (47660225-47660093)
               

               
               105-237, gnl|Mm7|chr2 (90656513-90656645)
               


               
               432-769, gnl|bosTau2|chr15 (48689653-48689994)
               

               
               432-769, gnl|Hg17|chr11 (47647069-47646782)
               

               
               432-769, gnl|Mm7|chr2 (90660632-90661012)

Aligned organism(s): 6 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               105-237, gnl|bosTau2|chr15 (48685897-48686029)
               

               
               105-237, gnl|Hg17|chr11 (47660225-47660093)
               

               
               105-237, gnl|Mm7|chr2 (90656513-90656645)
               


               
               432-769, gnl|bosTau2|chr15 (48689653-48689994)
               

               
               432-769, gnl|Hg17|chr11 (47647069-47646782)
               

               
               432-769, gnl|Mm7|chr2 (90660632-90661012)

	105-237, gnl\|bosTau2\|chr15 (48685897-48686029)
	105-237, gnl\|Hg17\|chr11 (47660225-47660093)
	105-237, gnl\|Mm7\|chr2 (90656513-90656645)

	432-769, gnl\|bosTau2\|chr15 (48689653-48689994)
	432-769, gnl\|Hg17\|chr11 (47647069-47646782)
	432-769, gnl\|Mm7\|chr2 (90660632-90661012)