Ss1.1-Pig1-83L07.5
|
GCCTGCTACCTGTCCATCAACCCGCAGAAGGATGAGGCTCTGGAGACAGAGAAGGTGCAG
TACCTCTTGCCGGATGGCAGCACGCTTGATGTGGGGCCAGCGCGATTCCGGGCCCCTGAG
CTGCTGTTCCAGCCAGACCTGATAGGGGATGAGAGCGAGGGGCTCCACGAGGTGCTGGCC
TTCGCCATCCACAAGTCCGACATGGACCTGCGCCGGACACTGTTTTCCAACATCGTCCTT
TCAGGTGGCTCCACGCTGTTCAAAGGCTTCGGCGACCGGTTACTAAGTGAGGTAAAGAAG
CTTGCCCCAAAGGACGTCAAAATCAAGATCTCGGCCCCTCAGGAACGGCTATACTCGACG
TGGATCGGCGGCTCCATCCTAGCCTCGCTGGACACTTTCAAGAAGATGTGGGTATCCAAA
AAGGAATATGAAGAGGATGGCTCCCGGGCTATTCATCGTAAAACGTTCTAGCGCCCAAAG
AGGAAGGTGGAGGGAGGGGAGGAT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
GCCTGCTACCTGTCCATCAACCCGCAGAAGGATGAGGCTCTGGAGACAGAGAAGGTGCAG
TACCTCTTGCCGGATGGCAGCACGCTTGATGTGGGGCCAGCGCGATTCCGGGCCCCTGAG
CTGCTGTTCCAGCCAGACCTGATAGGGGATGAGAGCGAGGGGCTCCACGAGGTGCTGGCC
TTCGCCATCCACAAGTCCGACATGGACCTGCGCCGGACACTGTTTTCCAACATCGTCCTT
TCAGGTGGCTCCACGCTGTTCAAAGGCTTCGGCGACCGGTTACTAAGTGAGGTAAAGAAG
CTTGCCCCAAAGGACGTCAAAATCAAGATCTCGGCCCCTCAGGAACGGCTATACTCGACG
TGGATCGGCGGCTCCATCCTAGCCTCGCTGGACACTTTCAAGAAGATGTGGGTATCCAAA
AAGGAATATGAAGAGGATGGCTCCCGGGCTATTCATCGTAAAACGTTCTAGCGCCCAAAG
AGGAAGGTGGAGGGAGGGGAGGAT
|
|
gi|61840795|ref|XP_597096.1| |
Protein identifier
|
gi|61840795|ref|XP_597096.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
91-266, gnl|bosTau2|chr11 (3297615-3297790) |
|
91-266, gnl|canFam2|chr10 (48097962-48097855) |
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91-266, gnl|danRer3|chrNA (22983165-22983272) |
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91-266, gnl|dasNov1|scaffold_59324 (9459-9352) |
|
91-266, gnl|echTel1|scaffold_269221 (1292-1399) |
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91-266, gnl|fr1|chrUn (208083841-208083744) |
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91-266, gnl|galGal2|chr6 (22242042-22242149) |
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91-266, gnl|hg17|chr2 (97732923-97733030) |
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91-266, gnl|Hg17|chr2 (97733098-97732923) |
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91-266, gnl|mm7|chr1 (36942514-36942621) |
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91-266, gnl|Mm7|chr1 (36942689-36942514) |
|
91-266, gnl|monDom2|scaffold_1 (154759940-154760047) |
|
91-266, gnl|oryCun1|scaffold_210750 (63441-63548) |
|
91-266, gnl|panTro1|chr12 (100433304-100433411) |
|
91-266, gnl|rheMac2|chr13 (97465055-97465162) |
|
91-266, gnl|rn3|chr9 (35636748-35636855) |
|
91-266, gnl|tetNig1|chrUn_random (249254-249361) |
|
91-266, gnl|xenTro1|scaffold_87 (442489-442596) |
| |
|
370-503, gnl|bosTau2|chr11 (3299715-3299848) |
|
370-503, gnl|Hg17|chr2 (97731940-97731806) |
|
370-503, gnl|Mm7|chr1 (36941558-36941427) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
91-266, gnl|bosTau2|chr11 (3297615-3297790) |
|
91-266, gnl|canFam2|chr10 (48097962-48097855) |
|
91-266, gnl|danRer3|chrNA (22983165-22983272) |
|
91-266, gnl|dasNov1|scaffold_59324 (9459-9352) |
|
91-266, gnl|echTel1|scaffold_269221 (1292-1399) |
|
91-266, gnl|fr1|chrUn (208083841-208083744) |
|
91-266, gnl|galGal2|chr6 (22242042-22242149) |
|
91-266, gnl|hg17|chr2 (97732923-97733030) |
|
91-266, gnl|Hg17|chr2 (97733098-97732923) |
|
91-266, gnl|mm7|chr1 (36942514-36942621) |
|
91-266, gnl|Mm7|chr1 (36942689-36942514) |
|
91-266, gnl|monDom2|scaffold_1 (154759940-154760047) |
|
91-266, gnl|oryCun1|scaffold_210750 (63441-63548) |
|
91-266, gnl|panTro1|chr12 (100433304-100433411) |
|
91-266, gnl|rheMac2|chr13 (97465055-97465162) |
|
91-266, gnl|rn3|chr9 (35636748-35636855) |
|
91-266, gnl|tetNig1|chrUn_random (249254-249361) |
|
91-266, gnl|xenTro1|scaffold_87 (442489-442596) |
| |
|
370-503, gnl|bosTau2|chr11 (3299715-3299848) |
|
370-503, gnl|Hg17|chr2 (97731940-97731806) |
|
370-503, gnl|Mm7|chr1 (36941558-36941427) |
