Ss1.1-Pig1-87C05.5
               |  | ACAACGTGAAGACAGGCATCGCCAACACGCTGGGGAACAAGGGCGCTGTCGGGGTGTCAT
TCATGTTCAACGGCACCTCCTTGGGGTTCGTTAACAGCCACCTGACTTCCGGAAGTGAGA
AGAAACTCAGGCGAAACCAGAACTATATGAACATTCTGCGGTTTCTGGCTCTGGGAGACA
AGAAGCTAAGTTCTTTTAACATCACTCACCGCTTCACCCACCTCTTCTGGCTCGGGGATC
TCAACTACCGCGTGGAGCTGCCCACCTGGGAGGCAGAAACCATTATCCAGAAGATCAAGC
AGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCATGGAGCGGAAGGACCAGA
AGGTGTTCCTGCACTTCGAGGAGGAAGAAATCACCTTTGCGCCCACCTACCGTTTTGAGA
GGATGACTCGGGACAAATACGCCTACACTAAGCAGAAAGCCACAGGGATGAAGTACAACT
TGCCCTCCTGGTGTGACCGAGTCCTCTGGAAGTCCTACCCCCTGGTGCACGTGGTGTGTC
AGTCCTACGGCAGCACCAGCGATATTATGACAAGTGACCACAGCCCTGTGTTTGCCACCT
TTGAGGCAGGAGTCACCTCCCAGTTTGTCTCCAAGAACGGCCCTGGGACAGTCGACAGCC
AGGGACAGATCGAATTTCTCAGGTGCTACGCCACCCTGAAGACCAAGTCCCAGACCAAAT
TCTACCTGGAGTTCCACTCGAGCTGCTTGGAGAGTTTCGTCAAGAGTCAGGAAGGAGAAA
ACGAAGAAGGAAGCGAAGGGGAGTTGGTGGTGAAGTTTGGCGAGACCCTTCCCAAGCTGA
AGCCCATCATCT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | ACAACGTGAAGACAGGCATCGCCAACACGCTGGGGAACAAGGGCGCTGTCGGGGTGTCAT
TCATGTTCAACGGCACCTCCTTGGGGTTCGTTAACAGCCACCTGACTTCCGGAAGTGAGA
AGAAACTCAGGCGAAACCAGAACTATATGAACATTCTGCGGTTTCTGGCTCTGGGAGACA
AGAAGCTAAGTTCTTTTAACATCACTCACCGCTTCACCCACCTCTTCTGGCTCGGGGATC
TCAACTACCGCGTGGAGCTGCCCACCTGGGAGGCAGAAACCATTATCCAGAAGATCAAGC
AGCAGCAGTACGCAGACCTCCTGTCCCACGACCAGCTGCTCATGGAGCGGAAGGACCAGA
AGGTGTTCCTGCACTTCGAGGAGGAAGAAATCACCTTTGCGCCCACCTACCGTTTTGAGA
GGATGACTCGGGACAAATACGCCTACACTAAGCAGAAAGCCACAGGGATGAAGTACAACT
TGCCCTCCTGGTGTGACCGAGTCCTCTGGAAGTCCTACCCCCTGGTGCACGTGGTGTGTC
AGTCCTACGGCAGCACCAGCGATATTATGACAAGTGACCACAGCCCTGTGTTTGCCACCT
TTGAGGCAGGAGTCACCTCCCAGTTTGTCTCCAAGAACGGCCCTGGGACAGTCGACAGCC
AGGGACAGATCGAATTTCTCAGGTGCTACGCCACCCTGAAGACCAAGTCCCAGACCAAAT
TCTACCTGGAGTTCCACTCGAGCTGCTTGGAGAGTTTCGTCAAGAGTCAGGAAGGAGAAA
ACGAAGAAGGAAGCGAAGGGGAGTTGGTGGTGAAGTTTGGCGAGACCCTTCCCAAGCTGA
AGCCCATCATCT | 
               |  | 129-270, gnl|bosTau2|chr3 (80762707-80762566) | 
               |  | 129-270, gnl|canFam2|chr25 (47702410-47702568) | 
               |  | 129-270, gnl|danRer3|chr25 (25851945-25852079) | 
               |  | 129-270, gnl|dasNov1|scaffold_70007 (6642-6799) | 
               |  | 129-270, gnl|echTel1|scaffold_173047 (4502-4658) | 
               |  | 129-270, gnl|fr1|chrUn (43423721-43423874) | 
               |  | 129-270, gnl|galGal2|chr9 (593312-593472) | 
               |  | 129-270, gnl|hg17|chr2 (233859993-233860149) | 
               |  | 129-270, gnl|Hg17|chr2 (233859995-233860136) | 
               |  | 129-270, gnl|mm7|chr1 (87600678-87600834) | 
               |  | 129-270, gnl|Mm7|chr1 (87600680-87600821) | 
               |  | 129-270, gnl|monDom2|scaffold_174 (133383-133227) | 
               |  | 129-270, gnl|oryCun1|scaffold_194112 (3725-3881) | 
               |  | 129-270, gnl|panTro1|chr13 (124594703-124594859) | 
               |  | 129-270, gnl|rheMac2|chr12 (97052832-97052989) | 
               |  | 129-270, gnl|rn3|chr9 (86843854-86844009) | 
               |  | 129-270, gnl|tetNig1|chr1_random (743692-743838) | 
               |  | 129-270, gnl|xenTro1|scaffold_382 (399879-399722) | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
               |  | 129-270, gnl|bosTau2|chr3 (80762707-80762566) | 
               |  | 129-270, gnl|canFam2|chr25 (47702410-47702568) | 
               |  | 129-270, gnl|danRer3|chr25 (25851945-25852079) | 
               |  | 129-270, gnl|dasNov1|scaffold_70007 (6642-6799) | 
               |  | 129-270, gnl|echTel1|scaffold_173047 (4502-4658) | 
               |  | 129-270, gnl|fr1|chrUn (43423721-43423874) | 
               |  | 129-270, gnl|galGal2|chr9 (593312-593472) | 
               |  | 129-270, gnl|hg17|chr2 (233859993-233860149) | 
               |  | 129-270, gnl|Hg17|chr2 (233859995-233860136) | 
               |  | 129-270, gnl|mm7|chr1 (87600678-87600834) | 
               |  | 129-270, gnl|Mm7|chr1 (87600680-87600821) | 
               |  | 129-270, gnl|monDom2|scaffold_174 (133383-133227) | 
               |  | 129-270, gnl|oryCun1|scaffold_194112 (3725-3881) | 
               |  | 129-270, gnl|panTro1|chr13 (124594703-124594859) | 
               |  | 129-270, gnl|rheMac2|chr12 (97052832-97052989) | 
               |  | 129-270, gnl|rn3|chr9 (86843854-86844009) | 
               |  | 129-270, gnl|tetNig1|chr1_random (743692-743838) | 
               |  | 129-270, gnl|xenTro1|scaffold_382 (399879-399722) |