Ss1.1-Pig1-87F06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| TCCTCCGCCGCCGGCCATGGAGGTGGCGCCCGAGCAGCCGCGCTGGATGGCGCACCCCGC CGTGCTGAATGCGCAGCACCCCGACTCGCACCACCCGGGCCTGGCGCACAACTACATGGA GCCCGCGCAGCTGCTGCCTCCCGACGAGGTGGACGTCTTCTTCAACCACCTCGACTCGCA GGGCAACCCCTACTACGCCAACCCGGCCCACGCGCGGGCGCGTGTCTCCTACAGCCCCGC TCACGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGCCCAGGGCT GCCCTGGCTGGATGGGGGTAAAGCAGCCCTCTCGGCTGCTGCAGCACACCATCACAACCC CTGGACCGTCAACCCCTTCTCCAAGACGCCACTGCACCCTTCAGCTGCTGGAGGCCCTGG AGGCCCCCTCTCCGTGTACCCAGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| TCCTCCGCCGCCGGCCATGGAGGTGGCGCCCGAGCAGCCGCGCTGGATGGCGCACCCCGC CGTGCTGAATGCGCAGCACCCCGACTCGCACCACCCGGGCCTGGCGCACAACTACATGGA GCCCGCGCAGCTGCTGCCTCCCGACGAGGTGGACGTCTTCTTCAACCACCTCGACTCGCA GGGCAACCCCTACTACGCCAACCCGGCCCACGCGCGGGCGCGTGTCTCCTACAGCCCCGC TCACGCCCGCCTGACCGGAGGCCAGATGTGCCGCCCACACTTGTTGCACAGCCCAGGGCT GCCCTGGCTGGATGGGGGTAAAGCAGCCCTCTCGGCTGCTGCAGCACACCATCACAACCC CTGGACCGTCAACCCCTTCTCCAAGACGCCACTGCACCCTTCAGCTGCTGGAGGCCCTGG AGGCCCCCTCTCCGTGTACCCAGG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 121-245, - strand, RNAz p=0.828862 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 121-245, - strand, RNAz p=0.828862 |
| Aligned organism(s): 38 entry(ies) | More info |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
| 2-245, gnl|bosTau2|chr22 (46080285-46080528) | |
| 2-245, gnl|canFam2|chr20 (5482957-5483177) | |
| 2-245, gnl|danRer3|chr24 (16542152-16542384) | |
| 2-245, gnl|dasNov1|scaffold_132441 (6419-6639) | |
| 2-245, gnl|echTel1|scaffold_299416 (590-808) | |
| 2-245, gnl|fr1|chrUn (112464364-112464147) | |
| 2-245, gnl|galGal2|chr12 (9235347-9235127) | |
| 2-245, gnl|hg17|chr3 (129688340-129688560) | |
| 2-245, gnl|Hg17|chr3 (129688587-129688344) | |
| 2-245, gnl|loxAfr1|scaffold_200 (232496-232726) | |
| 2-245, gnl|mm7|chr6 (88274888-88274668) | |
| 2-245, gnl|Mm7|chr6 (88274639-88274882) | |
| 2-245, gnl|monDom2|scaffold_5 (47346776-47346996) | |
| 2-245, gnl|oryCun1|scaffold_150357 (7825-8045) | |
| 2-245, gnl|panTro1|chr2 (131588185-131588405) | |
| 2-245, gnl|rheMac2|chr11 (86356719-86356499) | |
| 2-245, gnl|rn3|chr4 (122525879-122525659) | |
| 2-245, gnl|tetNig1|chr11 (1048305-1048088) | |
| 2-245, gnl|xenTro1|scaffold_72 (1209687-1209907) | |
| 13-188, gnl|bosTau2|chr13 (6807179-6807357) | |
| 13-188, gnl|canFam2|chr2 (30930578-30930327) | |
| 13-188, gnl|danRer3|chr4 (23085932-23086162) | |
| 13-188, gnl|dasNov1|scaffold_132441 (6637-6419) | |
| 13-188, gnl|echTel1|scaffold_309273 (65051-64800) | |
| 13-188, gnl|fr1|chrUn (252771795-252771555) | |
| 13-188, gnl|galGal2|chr1 (5970848-5970597) | |
| 13-188, gnl|hg17|chr10 (8137621-8137872) | |
| 13-188, gnl|Hg17|chr10 (8137621-8137799) | |
| 13-188, gnl|loxAfr1|scaffold_200 (232731-232495) | |
| 13-188, gnl|mm7|chr2 (9816753-9816505) | |
| 13-188, gnl|Mm7|chr2 (9816751-9816576) | |
| 13-188, gnl|monDom2|scaffold_30 (4779877-4780128) | |
| 13-188, gnl|oryCun1|scaffold_202531 (64260-64009) | |
| 13-188, gnl|panTro1|chr8 (8239871-8240122) | |
| 13-188, gnl|rheMac2|chr9 (8256699-8256950) | |
| 13-188, gnl|rn3|chr17 (80002416-80002667) | |
| 13-188, gnl|tetNig1|chrUn_random (29751019-29751259) | |
| 13-188, gnl|xenTro1|scaffold_314 (1295117-1294873) |
| Aligned organism(s): 38 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 2-245, gnl|bosTau2|chr22 (46080285-46080528) | |
| 2-245, gnl|canFam2|chr20 (5482957-5483177) | |
| 2-245, gnl|danRer3|chr24 (16542152-16542384) | |
| 2-245, gnl|dasNov1|scaffold_132441 (6419-6639) | |
| 2-245, gnl|echTel1|scaffold_299416 (590-808) | |
| 2-245, gnl|fr1|chrUn (112464364-112464147) | |
| 2-245, gnl|galGal2|chr12 (9235347-9235127) | |
| 2-245, gnl|hg17|chr3 (129688340-129688560) | |
| 2-245, gnl|Hg17|chr3 (129688587-129688344) | |
| 2-245, gnl|loxAfr1|scaffold_200 (232496-232726) | |
| 2-245, gnl|mm7|chr6 (88274888-88274668) | |
| 2-245, gnl|Mm7|chr6 (88274639-88274882) | |
| 2-245, gnl|monDom2|scaffold_5 (47346776-47346996) | |
| 2-245, gnl|oryCun1|scaffold_150357 (7825-8045) | |
| 2-245, gnl|panTro1|chr2 (131588185-131588405) | |
| 2-245, gnl|rheMac2|chr11 (86356719-86356499) | |
| 2-245, gnl|rn3|chr4 (122525879-122525659) | |
| 2-245, gnl|tetNig1|chr11 (1048305-1048088) | |
| 2-245, gnl|xenTro1|scaffold_72 (1209687-1209907) | |
| 13-188, gnl|bosTau2|chr13 (6807179-6807357) | |
| 13-188, gnl|canFam2|chr2 (30930578-30930327) | |
| 13-188, gnl|danRer3|chr4 (23085932-23086162) | |
| 13-188, gnl|dasNov1|scaffold_132441 (6637-6419) | |
| 13-188, gnl|echTel1|scaffold_309273 (65051-64800) | |
| 13-188, gnl|fr1|chrUn (252771795-252771555) | |
| 13-188, gnl|galGal2|chr1 (5970848-5970597) | |
| 13-188, gnl|hg17|chr10 (8137621-8137872) | |
| 13-188, gnl|Hg17|chr10 (8137621-8137799) | |
| 13-188, gnl|loxAfr1|scaffold_200 (232731-232495) | |
| 13-188, gnl|mm7|chr2 (9816753-9816505) | |
| 13-188, gnl|Mm7|chr2 (9816751-9816576) | |
| 13-188, gnl|monDom2|scaffold_30 (4779877-4780128) | |
| 13-188, gnl|oryCun1|scaffold_202531 (64260-64009) | |
| 13-188, gnl|panTro1|chr8 (8239871-8240122) | |
| 13-188, gnl|rheMac2|chr9 (8256699-8256950) | |
| 13-188, gnl|rn3|chr17 (80002416-80002667) | |
| 13-188, gnl|tetNig1|chrUn_random (29751019-29751259) | |
| 13-188, gnl|xenTro1|scaffold_314 (1295117-1294873) |