Ss1.1-Pig1-88D05.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTTTACGGTGCTGCCGCGCCGCCGGGCCGCGGAACGTGCTGGGGCTTCTCGGCTTGAGC TTTGCCTCGCCTGCCCCGGACGGAGGTGATGGGGGACTCTAAGGAGGCCGTGGCTGAGGC TCCGCCGATTGGGGCCACTGCTCGGGACGGGCTCAGCCTCCTGTCCCAAGGAGAGACGGA GGAACCTTCTGCACAGGGATCAGCTTTATTTCTCGGCGGCAATGAAGTGAAGAGCCGAGC AGTGGTGAAGTACTCCTCTGCCCCGCCTCGGACGGCATTTGCGCGCCTGGAAGAGAAGAC AGACTTGAAACTCCCACCTGCCAACTGGCTCCGAGAGAGTGCCAAACTCGGACCGGCAGG AACTACCATTCTTGGCAATAGTAAGAAAAGCAAGCCATTTTCAAGCTTCGGGATGGCGTA CGACTTCATTGACTCCGTGGGAAATGACGTGGATGTTGTCTCTGACTCTGAAAACATAAA AAAGCTCCTGAAGATTCCCTACAGCAAGTCCCACGTCAGCATGGCAGTGCACCGCATCGG GAGGACCCTCTTACTGGACGAGTTAGACATTCAGGAACTGTTCATGAGGTCATCTCAGAC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTTTACGGTGCTGCCGCGCCGCCGGGCCGCGGAACGTGCTGGGGCTTCTCGGCTTGAGC TTTGCCTCGCCTGCCCCGGACGGAGGTGATGGGGGACTCTAAGGAGGCCGTGGCTGAGGC TCCGCCGATTGGGGCCACTGCTCGGGACGGGCTCAGCCTCCTGTCCCAAGGAGAGACGGA GGAACCTTCTGCACAGGGATCAGCTTTATTTCTCGGCGGCAATGAAGTGAAGAGCCGAGC AGTGGTGAAGTACTCCTCTGCCCCGCCTCGGACGGCATTTGCGCGCCTGGAAGAGAAGAC AGACTTGAAACTCCCACCTGCCAACTGGCTCCGAGAGAGTGCCAAACTCGGACCGGCAGG AACTACCATTCTTGGCAATAGTAAGAAAAGCAAGCCATTTTCAAGCTTCGGGATGGCGTA CGACTTCATTGACTCCGTGGGAAATGACGTGGATGTTGTCTCTGACTCTGAAAACATAAA AAAGCTCCTGAAGATTCCCTACAGCAAGTCCCACGTCAGCATGGCAGTGCACCGCATCGG GAGGACCCTCTTACTGGACGAGTTAGACATTCAGGAACTGTTCATGAGGTCATCTCAGAC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 288-405, - strand, RNAz p=0.979156 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 288-405, - strand, RNAz p=0.979156 |
| Aligned organism(s): 22 entry(ies) | More info |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
| 194-405, gnl|bosTau2|chr26 (33394298-33394087) | |
| 194-405, gnl|canFam2|chr28 (37893040-37893262) | |
| 194-405, gnl|danRer3|chr17 (5353228-5353008) | |
| 194-405, gnl|dasNov1|scaffold_30081 (3233-3455) | |
| 194-405, gnl|echTel1|scaffold_203135 (3488-3266) | |
| 194-405, gnl|fr1|chrUn (60925699-60925507) | |
| 194-405, gnl|galGal2|chrUn (136732898-136733120) | |
| 194-405, gnl|hg17|chr10 (127399752-127399974) | |
| 194-405, gnl|Hg17|chr10 (127399760-127399971) | |
| 194-405, gnl|loxAfr1|scaffold_801 (156458-156680) | |
| 194-405, gnl|mm7|chr7 (130043790-130044012) | |
| 194-405, gnl|Mm7|chr7 (130043798-130044009) | |
| 194-405, gnl|monDom2|scaffold_144 (861022-861244) | |
| 194-405, gnl|oryCun1|scaffold_202224 (40433-40221) | |
| 194-405, gnl|panTro1|chr8_random (9314913-9315135) | |
| 194-405, gnl|rheMac2|chr9 (125300939-125301161) | |
| 194-405, gnl|rn3|chr1 (193285894-193286116) | |
| 194-405, gnl|tetNig1|chr17 (7442771-7442557) | |
| 194-405, gnl|xenTro1|scaffold_47 (3065078-3064877) | |
| 473-598, gnl|bosTau2|chr26 (33391461-33391336) | |
| 473-598, gnl|Hg17|chr10 (127402370-127402495) | |
| 473-598, gnl|Mm7|chr7 (130046188-130046313) |
| Aligned organism(s): 22 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 194-405, gnl|bosTau2|chr26 (33394298-33394087) | |
| 194-405, gnl|canFam2|chr28 (37893040-37893262) | |
| 194-405, gnl|danRer3|chr17 (5353228-5353008) | |
| 194-405, gnl|dasNov1|scaffold_30081 (3233-3455) | |
| 194-405, gnl|echTel1|scaffold_203135 (3488-3266) | |
| 194-405, gnl|fr1|chrUn (60925699-60925507) | |
| 194-405, gnl|galGal2|chrUn (136732898-136733120) | |
| 194-405, gnl|hg17|chr10 (127399752-127399974) | |
| 194-405, gnl|Hg17|chr10 (127399760-127399971) | |
| 194-405, gnl|loxAfr1|scaffold_801 (156458-156680) | |
| 194-405, gnl|mm7|chr7 (130043790-130044012) | |
| 194-405, gnl|Mm7|chr7 (130043798-130044009) | |
| 194-405, gnl|monDom2|scaffold_144 (861022-861244) | |
| 194-405, gnl|oryCun1|scaffold_202224 (40433-40221) | |
| 194-405, gnl|panTro1|chr8_random (9314913-9315135) | |
| 194-405, gnl|rheMac2|chr9 (125300939-125301161) | |
| 194-405, gnl|rn3|chr1 (193285894-193286116) | |
| 194-405, gnl|tetNig1|chr17 (7442771-7442557) | |
| 194-405, gnl|xenTro1|scaffold_47 (3065078-3064877) | |
| 473-598, gnl|bosTau2|chr26 (33391461-33391336) | |
| 473-598, gnl|Hg17|chr10 (127402370-127402495) | |
| 473-598, gnl|Mm7|chr7 (130046188-130046313) |