Ss1.1-Pig1-97I06.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCCCGCCCTGGCCGCTCGCCGCCCGCCCGCCCGACGGAGACGCAGCCCCAACTATCTGAC TTCATGTGAAAGATGGCTAATGCGGAAGTGAGCGTCCCAGTGGGGGATGTGGTTGTGGTA CCCACCGAAGGAAATGAAGGGGAGAACCCCGAAGACACTAAAACCCAAGTAATCTTGCAG TTACAGCCTGTGCAACAAGGGATTTATGAAGCTGGGTCCGAGAACAACACAGCAGTTGTG GCAGTAGAAACTCACACGATACACAAAATTGAAGAAGGGATTGATGCAAGCACTATAGAA GCAAATGAGGACATGGAAATTGCTTACCCTATAACTTGTGGTGAGAGCAAAGCCATTCTC CTTTGGAAGAAGTTTGTATGTCCAGGAATAAATGTAAAATGTGTCAAGTTCAATGATCAG TTGATCAGCCCCAAGCATTTTGTTCATCTGGCTGGCAAATCCACCCTGAAGGACTGGAAG AGAGCTATTCGTCTGGGTGGAATCATGCTCAGGAAAATGATGGACTCCGGACAGATTGAT TTTTACCAACATGACAAGGTTTGCTCCAATACCTGCAGAAGCACCAAATTTGATCTTCTG ATCAGCAGTGCAAGAGCCCCAGTGCCAGGACAGCAGACAAGTGTGGTGCAGACACCCACT TCGGCCGATGGTAGCATCACACAGATTGCTATCTCAGAAGAGAGCATGGAAGAGGCTGGG CTGGAATGGAACTCTGCTCTCACTGCTGCTGTCACCATGGCCACAGAGGAAGGCGTGAAG AAAGACTCCGAGGAAATTTCAGAGGACACTTTGATGTTCTGGAAAGGAATTGCTGACGTA GGACTGATGGAAGAGGTTGTCTGCAATATACAGAAGGAAATAGAGGAGCTACTCAGGGGG AGTTCAGCAGCGGCTTATCCAGGCTCCCTTCCAGGTCACAGACTTGGAACGCCAGTTGGA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCCCGCCCTGGCCGCTCGCCGCCCGCCCGCCCGACGGAGACGCAGCCCCAACTATCTGAC TTCATGTGAAAGATGGCTAATGCGGAAGTGAGCGTCCCAGTGGGGGATGTGGTTGTGGTA CCCACCGAAGGAAATGAAGGGGAGAACCCCGAAGACACTAAAACCCAAGTAATCTTGCAG TTACAGCCTGTGCAACAAGGGATTTATGAAGCTGGGTCCGAGAACAACACAGCAGTTGTG GCAGTAGAAACTCACACGATACACAAAATTGAAGAAGGGATTGATGCAAGCACTATAGAA GCAAATGAGGACATGGAAATTGCTTACCCTATAACTTGTGGTGAGAGCAAAGCCATTCTC CTTTGGAAGAAGTTTGTATGTCCAGGAATAAATGTAAAATGTGTCAAGTTCAATGATCAG TTGATCAGCCCCAAGCATTTTGTTCATCTGGCTGGCAAATCCACCCTGAAGGACTGGAAG AGAGCTATTCGTCTGGGTGGAATCATGCTCAGGAAAATGATGGACTCCGGACAGATTGAT TTTTACCAACATGACAAGGTTTGCTCCAATACCTGCAGAAGCACCAAATTTGATCTTCTG ATCAGCAGTGCAAGAGCCCCAGTGCCAGGACAGCAGACAAGTGTGGTGCAGACACCCACT TCGGCCGATGGTAGCATCACACAGATTGCTATCTCAGAAGAGAGCATGGAAGAGGCTGGG CTGGAATGGAACTCTGCTCTCACTGCTGCTGTCACCATGGCCACAGAGGAAGGCGTGAAG AAAGACTCCGAGGAAATTTCAGAGGACACTTTGATGTTCTGGAAAGGAATTGCTGACGTA GGACTGATGGAAGAGGTTGTCTGCAATATACAGAAGGAAATAGAGGAGCTACTCAGGGGG AGTTCAGCAGCGGCTTATCCAGGCTCCCTTCCAGGTCACAGACTTGGAACGCCAGTTGGA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 42-415, - strand, RNAz p=0.804995 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 42-415, - strand, RNAz p=0.804995 |
| Aligned organism(s): 42 entry(ies) | More info |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
| 42-201, gnl|bosTau2|chr2 (76844538-76844697) | |
| 42-201, gnl|Hg17|chr1 (28830710-28830869) | |
| 42-201, gnl|Mm7|chr4 (131466252-131466093) | |
| 283-415, gnl|bosTau2|chr2 (76853773-76853905) | |
| 283-415, gnl|Hg17|chr1 (28838712-28838844) | |
| 283-415, gnl|Mm7|chr4 (131456869-131456740) | |
| 506-674, gnl|bosTau2|chr2 (76857554-76857722) | |
| 506-674, gnl|canFam2|chr2 (74712420-74712223) | |
| 506-674, gnl|danRer3|chr19 (40026570-40026728) | |
| 506-674, gnl|dasNov1|scaffold_157271 (3705-3887) | |
| 506-674, gnl|echTel1|scaffold_239731 (3007-2809) | |
| 506-674, gnl|fr1|chrUn (250165894-250166093) | |
| 506-674, gnl|galGal2|chr23 (1864234-1864054) | |
| 506-674, gnl|hg17|chr1 (28844034-28844232) | |
| 506-674, gnl|Hg17|chr1 (28844048-28844216) | |
| 506-674, gnl|loxAfr1|scaffold_37967 (7837-8035) | |
| 506-674, gnl|mm7|chr4 (131449347-131449150) | |
| 506-674, gnl|Mm7|chr4 (131449332-131449164) | |
| 506-674, gnl|monDom2|scaffold_147 (1279711-1279905) | |
| 506-674, gnl|oryCun1|scaffold_104826 (5718-5520) | |
| 506-674, gnl|panTro1|chr1 (29417948-29418131) | |
| 506-674, gnl|rheMac2|chr1 (31423661-31423859) | |
| 506-674, gnl|rn3|chr5 (151134144-151133947) | |
| 506-674, gnl|tetNig1|chr21 (5745822-5745659) | |
| 506-674, gnl|xenTro1|scaffold_98 (102796-102610) | |
| 800-941, gnl|bosTau2|chr2 (76860914-76861054) | |
| 800-941, gnl|canFam2|chr2 (74707458-74707290) | |
| 800-941, gnl|danRer3|chr19 (40030500-40030662) | |
| 800-941, gnl|echTel1|scaffold_213742 (3279-3110) | |
| 800-941, gnl|fr1|chrUn (250166339-250166484) | |
| 800-941, gnl|galGal2|chr23 (1862460-1862299) | |
| 800-941, gnl|hg17|chr1 (28851301-28851469) | |
| 800-941, gnl|Hg17|chr1 (28851317-28851457) | |
| 800-941, gnl|loxAfr1|scaffold_37967 (10074-10243) | |
| 800-941, gnl|mm7|chr4 (131445563-131445395) | |
| 800-941, gnl|Mm7|chr4 (131445545-131445405) | |
| 800-941, gnl|monDom2|scaffold_147 (1282556-1282739) | |
| 800-941, gnl|oryCun1|scaffold_104826 (3097-2929) | |
| 800-941, gnl|rheMac2|chr10 (756440-756603) | |
| 800-941, gnl|rn3|chr5 (151130353-151130186) | |
| 800-941, gnl|tetNig1|chr21 (5745417-5745265) | |
| 800-941, gnl|xenTro1|scaffold_98 (97722-97557) |
| Aligned organism(s): 42 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 42-201, gnl|bosTau2|chr2 (76844538-76844697) | |
| 42-201, gnl|Hg17|chr1 (28830710-28830869) | |
| 42-201, gnl|Mm7|chr4 (131466252-131466093) | |
| 283-415, gnl|bosTau2|chr2 (76853773-76853905) | |
| 283-415, gnl|Hg17|chr1 (28838712-28838844) | |
| 283-415, gnl|Mm7|chr4 (131456869-131456740) | |
| 506-674, gnl|bosTau2|chr2 (76857554-76857722) | |
| 506-674, gnl|canFam2|chr2 (74712420-74712223) | |
| 506-674, gnl|danRer3|chr19 (40026570-40026728) | |
| 506-674, gnl|dasNov1|scaffold_157271 (3705-3887) | |
| 506-674, gnl|echTel1|scaffold_239731 (3007-2809) | |
| 506-674, gnl|fr1|chrUn (250165894-250166093) | |
| 506-674, gnl|galGal2|chr23 (1864234-1864054) | |
| 506-674, gnl|hg17|chr1 (28844034-28844232) | |
| 506-674, gnl|Hg17|chr1 (28844048-28844216) | |
| 506-674, gnl|loxAfr1|scaffold_37967 (7837-8035) | |
| 506-674, gnl|mm7|chr4 (131449347-131449150) | |
| 506-674, gnl|Mm7|chr4 (131449332-131449164) | |
| 506-674, gnl|monDom2|scaffold_147 (1279711-1279905) | |
| 506-674, gnl|oryCun1|scaffold_104826 (5718-5520) | |
| 506-674, gnl|panTro1|chr1 (29417948-29418131) | |
| 506-674, gnl|rheMac2|chr1 (31423661-31423859) | |
| 506-674, gnl|rn3|chr5 (151134144-151133947) | |
| 506-674, gnl|tetNig1|chr21 (5745822-5745659) | |
| 506-674, gnl|xenTro1|scaffold_98 (102796-102610) | |
| 800-941, gnl|bosTau2|chr2 (76860914-76861054) | |
| 800-941, gnl|canFam2|chr2 (74707458-74707290) | |
| 800-941, gnl|danRer3|chr19 (40030500-40030662) | |
| 800-941, gnl|echTel1|scaffold_213742 (3279-3110) | |
| 800-941, gnl|fr1|chrUn (250166339-250166484) | |
| 800-941, gnl|galGal2|chr23 (1862460-1862299) | |
| 800-941, gnl|hg17|chr1 (28851301-28851469) | |
| 800-941, gnl|Hg17|chr1 (28851317-28851457) | |
| 800-941, gnl|loxAfr1|scaffold_37967 (10074-10243) | |
| 800-941, gnl|mm7|chr4 (131445563-131445395) | |
| 800-941, gnl|Mm7|chr4 (131445545-131445405) | |
| 800-941, gnl|monDom2|scaffold_147 (1282556-1282739) | |
| 800-941, gnl|oryCun1|scaffold_104826 (3097-2929) | |
| 800-941, gnl|rheMac2|chr10 (756440-756603) | |
| 800-941, gnl|rn3|chr5 (151130353-151130186) | |
| 800-941, gnl|tetNig1|chr21 (5745417-5745265) | |
| 800-941, gnl|xenTro1|scaffold_98 (97722-97557) |