Ss1.1-Pig1-98M22.5
               |  | GCCTCGGCTCTGGCTCCCTTGGGAAAGGCCGCCGCGCCTTGTCAGGAGTAGGAGCCTGGG
CTCTTAAGTGCGGGCCCCGGGAGCCAAGCCTCGGACTGAGGACCGCCTTCGTGCTCAGGG
CACCCAGACCAGGTGTGCCCTCGGCCGGGAGGTTGCACATCTGGAAAGTACAGGGGGCCC
CCACCTCGGCTAGACCATGGCACCCTCGCGGAATGTGGTGAAGATCGCCGTCCAGATGCG
TGAGGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAAACCCTTGGCCGCCGTGCTGAA
GGAGGTGTGCGAGGCGTGGAACCTGCCTCACTCTGAGCGCTATGCCCTGCAATTTGCTGA
TGGGCACGGGAGATACATCACTGAGAACAACCGCATGGAGATCAAGAATGGCAGTATCCT
ATGCCTCAGCACAGCCCCAGACCTTGAGGCTGAGCGGCTTTTAGGTGGCCTGCAGAGTGA
GAGTCCTGAAGGGCGCCGGGAAGCCCTGCGGCATCT | 
Blue-coloured subsequences are predicted RNA structures by RNAz
               |  | GCCTCGGCTCTGGCTCCCTTGGGAAAGGCCGCCGCGCCTTGTCAGGAGTAGGAGCCTGGG
CTCTTAAGTGCGGGCCCCGGGAGCCAAGCCTCGGACTGAGGACCGCCTTCGTGCTCAGGG
CACCCAGACCAGGTGTGCCCTCGGCCGGGAGGTTGCACATCTGGAAAGTACAGGGGGCCC
CCACCTCGGCTAGACCATGGCACCCTCGCGGAATGTGGTGAAGATCGCCGTCCAGATGCG
TGAGGCCATCCCGCAGCTCATCCAGCTGGACCAGGCGAAACCCTTGGCCGCCGTGCTGAA
GGAGGTGTGCGAGGCGTGGAACCTGCCTCACTCTGAGCGCTATGCCCTGCAATTTGCTGA
TGGGCACGGGAGATACATCACTGAGAACAACCGCATGGAGATCAAGAATGGCAGTATCCT
ATGCCTCAGCACAGCCCCAGACCTTGAGGCTGAGCGGCTTTTAGGTGGCCTGCAGAGTGA
GAGTCCTGAAGGGCGCCGGGAAGCCCTGCGGCATCT | 
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map