Non-Coding RNA Search

Ss1.1-Pig2-103P18.5

Sequence:


               
               GAGGCGATGAAAGGAAGCCTTGCGGTTCGAGGGCTAGCTGGTCATCTCCTTGCAGTGATG
CTGAGCCTCCCGAGTCGAGGCACAGAACGGTCGTGAAAATCTCTGCTTCTTCTACTTAAA
AAGGGACACACGGCGTTAAACAAACTTACGTGAAAGTTCATTTACCGAGCAGGCAAATTA
GGAATTTACTCTTTGGTGCAAAGAGCCAGCTTTCCTCGAGACCGAATTTATCAAAGTCCC
AAGGATTCTAGCGTTTGTCGGGAACAGCAGATTCTTCTCCTCTTCTTCGGGTGCCTGTCA
TCTGGGCCCACAGAGAAAGGAAGTTCCGGGGGAGAATTTCCGAGCTCCCGGATGTTACTG
TCGATAATCACGGAGGCCCGCCTCTCCCTGCATTAACGCCTTTTTTGTTCTTCATTTGTT
TTAGGTTTAATGCTTGTTCATAACAAGTTGGTGGACCCCTTGTACAGTATCAAAGAGAAA
GAAACAGAAAAAAGCCAGTCTTCTAAGAAACCATACAGCGACTAGCCTGTGCTACTTCTA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GAGGCGATGAAAGGAAGCCTTGCGGTTCGAGGGCTAGCTGGTCATCTCCTTGCAGTGATG
CTGAGCCTCCCGAGTCGAGGCACAGAACGGTCGTGAAAATCTCTGCTTCTTCTACTTAAA
AAGGGACACACGGCGTTAAACAAACTTACGTGAAAGTTCATTTACCGAGCAGGCAAATTA
GGAATTTACTCTTTGGTGCAAAGAGCCAGCTTTCCTCGAGACCGAATTTATCAAAGTCCC
AAGGATTCTAGCGTTTGTCGGGAACAGCAGATTCTTCTCCTCTTCTTCGGGTGCCTGTCA
TCTGGGCCCACAGAGAAAGGAAGTTCCGGGGGAGAATTTCCGAGCTCCCGGATGTTACTG
TCGATAATCACGGAGGCCCGCCTCTCCCTGCATTAACGCCTTTTTTGTTCTTCATTTGTT
TTAGGTTTAATGCTTGTTCATAACAAGTTGGTGGACCCCTTGTACAGTATCAAAGAGAAA
GAAACAGAAAAAAGCCAGTCTTCTAAGAAACCATACAGCGACTAGCCTGTGCTACTTCTA

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               321-437, - strand, RNAz p=0.88003

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               321-437, - strand, RNAz p=0.88003

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               73-539, gnl|bosTau2|chr7 (35773233-35773700)
               

               
               73-539, gnl|Hg17|chr5 (141362339-141361763)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-539, gnl|bosTau2|chr7 (35773233-35773700)
               

               
               73-539, gnl|Hg17|chr5 (141362339-141361763)

	73-539, gnl\|bosTau2\|chr7 (35773233-35773700)
	73-539, gnl\|Hg17\|chr5 (141362339-141361763)