Non-Coding RNA Search

Ss1.1-Pig2-107B12.5

Sequence:


               
               GGTGCCTTATCTCCACCATCAGGCAGCAATAGAGGCCACTGTCCAGCAAGGTCAGGTTGC
GCATGGTGAAGGTGAAGTTGCCGTGGTGGTCGGAGGCCAACTCCAACCCGTGGCGCTGTG
CCAGATCCTGGCTGGAATTGGCCAGGTGGCTACTGTGATGCAAGTGAAGATCATGGAACG
AGAGGTTGCGGATAGACCGGTGCTCCGAGCAGGCCTGCACCTCGCCCCGTGAGCTGCGGT
ACCAGGTCTTATAGAAGGTCACGTCGTGCCCTTTGGCCATGGGGCCCAAGAGTCTGCAGG
TGAGAGTGACATTCTGCCCCTCAGGACACACATACAGGGAATATGGTGTGGTGATCTTGA
ACGCTGCCACCATACCTCGGGAGGCAGCCAGGAAGAAGGCGAGGAGCACAGGCCCCCAGC
GCCGGCTGCCAGCCTCCAGGACTAGGGGGACGCCCATGTCGCCGTCGGGCAGATCGGCGT
CTGGCGTAACCGGGCGGGAGCGGGCCCGGGGACGTGCAGAGGGCACACTGAGTTCGCAGG
GAGCGGACGGGA

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GGTGCCTTATCTCCACCATCAGGCAGCAATAGAGGCCACTGTCCAGCAAGGTCAGGTTGC
GCATGGTGAAGGTGAAGTTGCCGTGGTGGTCGGAGGCCAACTCCAACCCGTGGCGCTGTG
CCAGATCCTGGCTGGAATTGGCCAGGTGGCTACTGTGATGCAAGTGAAGATCATGGAACG
AGAGGTTGCGGATAGACCGGTGCTCCGAGCAGGCCTGCACCTCGCCCCGTGAGCTGCGGT
ACCAGGTCTTATAGAAGGTCACGTCGTGCCCTTTGGCCATGGGGCCCAAGAGTCTGCAGG
TGAGAGTGACATTCTGCCCCTCAGGACACACATACAGGGAATATGGTGTGGTGATCTTGA
ACGCTGCCACCATACCTCGGGAGGCAGCCAGGAAGAAGGCGAGGAGCACAGGCCCCCAGC
GCCGGCTGCCAGCCTCCAGGACTAGGGGGACGCCCATGTCGCCGTCGGGCAGATCGGCGT
CTGGCGTAACCGGGCGGGAGCGGGCCCGGGGACGTGCAGAGGGCACACTGAGTTCGCAGG
GAGCGGACGGGA

Coded protein: 1 entry(ies)

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Coded protein: 1 entry(ies)

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               gi|26328213|dbj|BAC27847.1|

Coded protein: 1 entry(ies)

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Protein identifier


               
               gi|26328213|dbj|BAC27847.1|

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               1-156, + strand, RNAz p=0.948939

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               1-156, + strand, RNAz p=0.948939

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               1-372, gnl|bosTau2|chr28 (21240364-21239993)
               

               
               1-372, gnl|Hg17|chr10 (73191412-73191786)
               

               
               1-372, gnl|Mm7|chr10 (59876411-59876040)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               1-372, gnl|bosTau2|chr28 (21240364-21239993)
               

               
               1-372, gnl|Hg17|chr10 (73191412-73191786)
               

               
               1-372, gnl|Mm7|chr10 (59876411-59876040)

	1-372, gnl\|bosTau2\|chr28 (21240364-21239993)
	1-372, gnl\|Hg17\|chr10 (73191412-73191786)
	1-372, gnl\|Mm7\|chr10 (59876411-59876040)