Ss1.1-Pig2-107H14.5
|
TGTCCTCTGATCCCCCCGCCCCGCTCCTGGTCCCTTAGAGCAGCTCCTTCTGCCCCCTCA
GTTCAGGTAGAGGAGGAAGCCAAGGAAGATTCCAGAATTCCATGAGTCCTGAGGTTGCCC
CACACGAAGAAGCTGCGGTTTCTCTGCCTCAGCTGCTACAGAGACTAGAACTGGCATCCC
CTTGGAGACAGACGATTTGGGGATGATCCCTGCTTAAGCCCCATCATCCCCACGCGGGTA
CTTGTATTGATACAAGACAGCTGGCGACCGTCTCGAATCCAGGGGTCCCCAAGCCTGGGC
CTGACATTCCCGGCACGCACCGCCAGGTGGCGTCCGGACACTACAGTCTGTGGACCAGAT
CCGGAACCACAGTTCCATTCCCGATGGGCCTGACACCCCGATAAAGAGACTCTGGAAAGG
GTCCCCACTTAGGGGACACGGCAAAAGCTTAAGCCATTTGGAGCCCTTTCCCTTTGGTAG
GCTTCCGCTGAGCTGAGCATTCTGCTCTGTGCAGTAAGACGCTCACATTTTTGCCCGTAT
CAAAAGTTTCTGACATAGAATCTCACACCCTCACCCCTACCCCCTACCCCAAGGATCTGG
AGGAATATACAAAGTAGGTGAGTCATTTTGCAGAGTGAAGAGTGCTAACGTAAAGCAAAT
AGTCACCCACATTCTTGTAAATCCCCATTTTTCTATATGGTCGCTTTGCTTAAAATCGGG
GTCTGCCCCAACGAACAGCACGGTCATTATCTGGCAGGCTGGGGAACCAGCTCCCAACGG
GGATGGGAGGGC
|
Blue-coloured subsequences are predicted RNA structures by RNAz
|
TGTCCTCTGATCCCCCCGCCCCGCTCCTGGTCCCTTAGAGCAGCTCCTTCTGCCCCCTCA
GTTCAGGTAGAGGAGGAAGCCAAGGAAGATTCCAGAATTCCATGAGTCCTGAGGTTGCCC
CACACGAAGAAGCTGCGGTTTCTCTGCCTCAGCTGCTACAGAGACTAGAACTGGCATCCC
CTTGGAGACAGACGATTTGGGGATGATCCCTGCTTAAGCCCCATCATCCCCACGCGGGTA
CTTGTATTGATACAAGACAGCTGGCGACCGTCTCGAATCCAGGGGTCCCCAAGCCTGGGC
CTGACATTCCCGGCACGCACCGCCAGGTGGCGTCCGGACACTACAGTCTGTGGACCAGAT
CCGGAACCACAGTTCCATTCCCGATGGGCCTGACACCCCGATAAAGAGACTCTGGAAAGG
GTCCCCACTTAGGGGACACGGCAAAAGCTTAAGCCATTTGGAGCCCTTTCCCTTTGGTAG
GCTTCCGCTGAGCTGAGCATTCTGCTCTGTGCAGTAAGACGCTCACATTTTTGCCCGTAT
CAAAAGTTTCTGACATAGAATCTCACACCCTCACCCCTACCCCCTACCCCAAGGATCTGG
AGGAATATACAAAGTAGGTGAGTCATTTTGCAGAGTGAAGAGTGCTAACGTAAAGCAAAT
AGTCACCCACATTCTTGTAAATCCCCATTTTTCTATATGGTCGCTTTGCTTAAAATCGGG
GTCTGCCCCAACGAACAGCACGGTCATTATCTGGCAGGCTGGGGAACCAGCTCCCAACGG
GGATGGGAGGGC
|
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
Human gene identifier and UTR site,
human gene reading direction
|
72-789, gnl|bosTau2|chr29 (31253333-31252626) |
|
72-789, gnl|canFam2|chr18 (57953083-57952237) |
|
72-789, gnl|dasNov1|scaffold_142172 (8421-7531) |
|
72-789, gnl|hg17|chr11 (61040349-61041358) |
|
72-789, gnl|Hg17|chr11 (61041412-61040689) |
|
72-789, gnl|loxAfr1|scaffold_2055 (135925-136923) |
|
72-789, gnl|mm7|chr19 (10130763-10129856) |
|
72-789, gnl|Mm7|chr19 (10129809-10130484) |
|
72-789, gnl|panTro1|chr9 (61966588-61967611) |
|
72-789, gnl|rheMac2|chr14 (12563362-12562340) |
|
72-789, gnl|rn3|chr1 (213095920-213095015) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
72-789, gnl|bosTau2|chr29 (31253333-31252626) |
|
72-789, gnl|canFam2|chr18 (57953083-57952237) |
|
72-789, gnl|dasNov1|scaffold_142172 (8421-7531) |
|
72-789, gnl|hg17|chr11 (61040349-61041358) |
|
72-789, gnl|Hg17|chr11 (61041412-61040689) |
|
72-789, gnl|loxAfr1|scaffold_2055 (135925-136923) |
|
72-789, gnl|mm7|chr19 (10130763-10129856) |
|
72-789, gnl|Mm7|chr19 (10129809-10130484) |
|
72-789, gnl|panTro1|chr9 (61966588-61967611) |
|
72-789, gnl|rheMac2|chr14 (12563362-12562340) |
|
72-789, gnl|rn3|chr1 (213095920-213095015) |
