Ss1.1-Pig2-108G14.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ATTCCGGCAGCTCTGAGTTGAGGAAGGAATTGAAGAGGCTGTGTCGCCGGCTTGCGAGAA GAATCCAAGTCGCTCTCAGAAACGTTTGCTAGGTGGGCCTTGGTGGAAACGCCCCCGAAC ACCGCAAGAATTGGGAACGTATCCCTGTCTGTCTGCCTGGGAAGAGACCTAGACACTGGC CCTTCTGTGAGTGAAGATGAGGAAACAGCTGTAAATCAACCAAAGGAAGCTTGCAGCGCT CTTTTGGCTTGAGAAGCGACGGCTGGTGGAAGGAGGTGAACCCCTGGCGGGAAGGATGGC TTAGCAGCCGCTCCAGCTCCTGAGCAGGCCTGGTGGGATGTGCCCTTAGGCCACTATGGA CGGAGCCCACAGCGCAGCCCTGCAGCTGCAGCAGCTCCCACCCACGAGCAGCGCTGACCC CGTGAGTGAGGCTTCCTTCTCCTACAAGGAAAACTTGATCGGCGCACTCTTGGCAATTTT CGGGCACCTTGTGGTCAGCATTGCACTTAACCTTCAGAAGTACTGCCACATCCGCCTTGC AGGCTCCAAGGACCCTCGGGCCTATTTCAAGACCAAGACATGGTGGCTGGGCCTGTTTCT GATGCTGCTGGGCGAGCTCGGTGTGTTTGCCTCCTATGCCTTTGCTCCGCTCTCACTGAT ATCTCTCTCGACTCTTTGCCCCCACTTCGTCCCCCCATCCAGCATCCTCAACTATGAAGA CAGTGCTCTCTGACCTAAAGACTTTCTGAGGCGCTACATTTTATCCTTCGTTGGCTGCGG TCTGGCCATCGTGGGCACCTACTTGCTGGTGACATTCGCACCCAACAGTCACGAGAAGAT GACAGGCGAGAACATCACCAGGCACCTTGTGAGCTGGCCTTTTCTCCTGTACATGCTCGT GGGGATCGTCCTCTTCTGCTCGCTGTTGTTGAAGCCCCCAGGCAGCCTTCAGCCAGCGGG GGATGGGACTCACCTCTTGGTGGCGCTACTCGGCTCGATGACCGTGGTGACGGTGAAGGC CGTGGCTGGGATGCTCATCCTGTCCATACAGGGGAACCTGCAGCTCGACTACCCCATCTT CTACGTGATGTTCGTGTGCATGGTGGCCACCGCCATCTATCAAGCCGCGTTTTTAGGTCA GGCCTCGCAGATGTATGACTCCTCTCTGATTGCCAGCGTGGGCTACATTCTGTCCACGAC TGTGGCCATCACAGCAGGTGCCATCTTCTACCTGGACTTCCTCGGGGAGGACGTGCTGCA |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ATTCCGGCAGCTCTGAGTTGAGGAAGGAATTGAAGAGGCTGTGTCGCCGGCTTGCGAGAA GAATCCAAGTCGCTCTCAGAAACGTTTGCTAGGTGGGCCTTGGTGGAAACGCCCCCGAAC ACCGCAAGAATTGGGAACGTATCCCTGTCTGTCTGCCTGGGAAGAGACCTAGACACTGGC CCTTCTGTGAGTGAAGATGAGGAAACAGCTGTAAATCAACCAAAGGAAGCTTGCAGCGCT CTTTTGGCTTGAGAAGCGACGGCTGGTGGAAGGAGGTGAACCCCTGGCGGGAAGGATGGC TTAGCAGCCGCTCCAGCTCCTGAGCAGGCCTGGTGGGATGTGCCCTTAGGCCACTATGGA CGGAGCCCACAGCGCAGCCCTGCAGCTGCAGCAGCTCCCACCCACGAGCAGCGCTGACCC CGTGAGTGAGGCTTCCTTCTCCTACAAGGAAAACTTGATCGGCGCACTCTTGGCAATTTT CGGGCACCTTGTGGTCAGCATTGCACTTAACCTTCAGAAGTACTGCCACATCCGCCTTGC AGGCTCCAAGGACCCTCGGGCCTATTTCAAGACCAAGACATGGTGGCTGGGCCTGTTTCT GATGCTGCTGGGCGAGCTCGGTGTGTTTGCCTCCTATGCCTTTGCTCCGCTCTCACTGAT ATCTCTCTCGACTCTTTGCCCCCACTTCGTCCCCCCATCCAGCATCCTCAACTATGAAGA CAGTGCTCTCTGACCTAAAGACTTTCTGAGGCGCTACATTTTATCCTTCGTTGGCTGCGG TCTGGCCATCGTGGGCACCTACTTGCTGGTGACATTCGCACCCAACAGTCACGAGAAGAT GACAGGCGAGAACATCACCAGGCACCTTGTGAGCTGGCCTTTTCTCCTGTACATGCTCGT GGGGATCGTCCTCTTCTGCTCGCTGTTGTTGAAGCCCCCAGGCAGCCTTCAGCCAGCGGG GGATGGGACTCACCTCTTGGTGGCGCTACTCGGCTCGATGACCGTGGTGACGGTGAAGGC CGTGGCTGGGATGCTCATCCTGTCCATACAGGGGAACCTGCAGCTCGACTACCCCATCTT CTACGTGATGTTCGTGTGCATGGTGGCCACCGCCATCTATCAAGCCGCGTTTTTAGGTCA GGCCTCGCAGATGTATGACTCCTCTCTGATTGCCAGCGTGGGCTACATTCTGTCCACGAC TGTGGCCATCACAGCAGGTGCCATCTTCTACCTGGACTTCCTCGGGGAGGACGTGCTGCA |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | More info |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
| 300-412, - strand, RNAz p=0.907027 | |
| 303-405, - strand, RNAz p=0.609034 | |
| 777-895, - strand, RNAz p=0.60815 |
| Predicted RNA structure(s): 3 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 300-412, - strand, RNAz p=0.907027 | |
| 303-405, - strand, RNAz p=0.609034 | |
| 777-895, - strand, RNAz p=0.60815 |
| Aligned organism(s): 70 entry(ies) | More info |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
| 120-452, gnl|bosTau2|chr2 (81765447-81765113) | |
| 120-452, gnl|canFam2|chr2 (78125642-78125131) | |
| 120-452, gnl|dasNov1|scaffold_93580 (4321-3830) | |
| 120-452, gnl|echTel1|scaffold_322612 (87738-87219) | |
| 120-452, gnl|hg17|chr1 (24490962-24491498) | |
| 120-452, gnl|Hg17|chr1 (24491089-24491440) | |
| 120-452, gnl|loxAfr1|scaffold_24523 (8217-8725) | |
| 120-452, gnl|mm7|chr4 (134869832-134869312) | |
| 120-452, gnl|Mm7|chr4 (134869717-134869366) | |
| 120-452, gnl|oryCun1|scaffold_171020 (4245-3750) | |
| 120-452, gnl|panTro1|chr1 (24885494-24886030) | |
| 120-452, gnl|rheMac2|chr1 (27056554-27057084) | |
| 120-452, gnl|rn3|chr5 (154270035-154269495) | |
| 512-660, gnl|bosTau2|chr2 (81742719-81742570) | |
| 512-660, gnl|canFam2|chr2 (78102178-78101979) | |
| 512-660, gnl|danRer3|chr17 (32271016-32270814) | |
| 512-660, gnl|dasNov1|scaffold_504 (34158-33962) | |
| 512-660, gnl|echTel1|scaffold_320618 (196460-196659) | |
| 512-660, gnl|fr1|chrUn (55320852-55320653) | |
| 512-660, gnl|galGal2|chr23 (5142300-5142497) | |
| 512-660, gnl|hg17|chr1 (24513829-24514028) | |
| 512-660, gnl|Hg17|chr1 (24513844-24513993) | |
| 512-660, gnl|loxAfr1|scaffold_192 (10961-11160) | |
| 512-660, gnl|mm7|chr4 (134858168-134857969) | |
| 512-660, gnl|Mm7|chr4 (134858151-134858002) | |
| 512-660, gnl|monDom2|scaffold_91 (1265772-1265962) | |
| 512-660, gnl|oryCun1|scaffold_199132 (16994-17193) | |
| 512-660, gnl|panTro1|chr1 (24908458-24908657) | |
| 512-660, gnl|rheMac2|chr1 (27079223-27079422) | |
| 512-660, gnl|rn3|chr5 (154259053-154258854) | |
| 512-660, gnl|tetNig1|chr10 (6905621-6905440) | |
| 512-660, gnl|xenTro1|scaffold_442 (890135-890313) | |
| 750-895, gnl|bosTau2|chr2 (81709313-81709458) | |
| 750-895, gnl|canFam2|chr2 (78096740-78096604) | |
| 750-895, gnl|danRer3|chr17 (32269892-32269759) | |
| 750-895, gnl|dasNov1|scaffold_40433 (3392-3535) | |
| 750-895, gnl|echTel1|scaffold_320618 (201662-201802) | |
| 750-895, gnl|fr1|chrUn (55319537-55319417) | |
| 750-895, gnl|galGal2|chr23 (5143213-5143338) | |
| 750-895, gnl|hg17|chr1 (24521262-24521395) | |
| 750-895, gnl|Hg17|chr1 (24521277-24521422) | |
| 750-895, gnl|loxAfr1|scaffold_192 (15945-16084) | |
| 750-895, gnl|mm7|chr4 (134852923-134852790) | |
| 750-895, gnl|Mm7|chr4 (134852906-134852761) | |
| 750-895, gnl|monDom2|scaffold_91 (1267815-1267948) | |
| 750-895, gnl|oryCun1|scaffold_199132 (26705-26839) | |
| 750-895, gnl|panTro1|chr1 (24915912-24916045) | |
| 750-895, gnl|rheMac2|chr1 (27086592-27086725) | |
| 750-895, gnl|rn3|chr5 (154253801-154253668) | |
| 750-895, gnl|tetNig1|chr10 (6904806-6904686) | |
| 750-895, gnl|xenTro1|scaffold_442 (893174-893309) | |
| 992-1130, gnl|bosTau2|chr2 (81716580-81716718) | |
| 992-1130, gnl|canFam2|chr2 (78090440-78090275) | |
| 992-1130, gnl|danRer3|chr17 (32268722-32268568) | |
| 992-1130, gnl|dasNov1|scaffold_40433 (12022-12187) | |
| 992-1130, gnl|echTel1|scaffold_320618 (208218-208377) | |
| 992-1130, gnl|fr1|chrUn (55318746-55318597) | |
| 992-1130, gnl|galGal2|chr23 (5144497-5144652) | |
| 992-1130, gnl|hg17|chr1 (24527916-24528081) | |
| 992-1130, gnl|Hg17|chr1 (24527933-24528071) | |
| 992-1130, gnl|loxAfr1|scaffold_68832 (9544-9702) | |
| 992-1130, gnl|mm7|chr4 (134847098-134846936) | |
| 992-1130, gnl|Mm7|chr4 (134847079-134846941) | |
| 992-1130, gnl|monDom2|scaffold_91 (1277091-1277244) | |
| 992-1130, gnl|oryCun1|scaffold_199132 (32053-32218) | |
| 992-1130, gnl|panTro1|chr1 (24922584-24922749) | |
| 992-1130, gnl|rheMac2|chr1 (27092917-27093082) | |
| 992-1130, gnl|rn3|chr7 (70052366-70052208) | |
| 992-1130, gnl|tetNig1|chr10 (6904002-6903854) | |
| 992-1130, gnl|xenTro1|scaffold_442 (897188-897342) |
| Aligned organism(s): 70 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 120-452, gnl|bosTau2|chr2 (81765447-81765113) | |
| 120-452, gnl|canFam2|chr2 (78125642-78125131) | |
| 120-452, gnl|dasNov1|scaffold_93580 (4321-3830) | |
| 120-452, gnl|echTel1|scaffold_322612 (87738-87219) | |
| 120-452, gnl|hg17|chr1 (24490962-24491498) | |
| 120-452, gnl|Hg17|chr1 (24491089-24491440) | |
| 120-452, gnl|loxAfr1|scaffold_24523 (8217-8725) | |
| 120-452, gnl|mm7|chr4 (134869832-134869312) | |
| 120-452, gnl|Mm7|chr4 (134869717-134869366) | |
| 120-452, gnl|oryCun1|scaffold_171020 (4245-3750) | |
| 120-452, gnl|panTro1|chr1 (24885494-24886030) | |
| 120-452, gnl|rheMac2|chr1 (27056554-27057084) | |
| 120-452, gnl|rn3|chr5 (154270035-154269495) | |
| 512-660, gnl|bosTau2|chr2 (81742719-81742570) | |
| 512-660, gnl|canFam2|chr2 (78102178-78101979) | |
| 512-660, gnl|danRer3|chr17 (32271016-32270814) | |
| 512-660, gnl|dasNov1|scaffold_504 (34158-33962) | |
| 512-660, gnl|echTel1|scaffold_320618 (196460-196659) | |
| 512-660, gnl|fr1|chrUn (55320852-55320653) | |
| 512-660, gnl|galGal2|chr23 (5142300-5142497) | |
| 512-660, gnl|hg17|chr1 (24513829-24514028) | |
| 512-660, gnl|Hg17|chr1 (24513844-24513993) | |
| 512-660, gnl|loxAfr1|scaffold_192 (10961-11160) | |
| 512-660, gnl|mm7|chr4 (134858168-134857969) | |
| 512-660, gnl|Mm7|chr4 (134858151-134858002) | |
| 512-660, gnl|monDom2|scaffold_91 (1265772-1265962) | |
| 512-660, gnl|oryCun1|scaffold_199132 (16994-17193) | |
| 512-660, gnl|panTro1|chr1 (24908458-24908657) | |
| 512-660, gnl|rheMac2|chr1 (27079223-27079422) | |
| 512-660, gnl|rn3|chr5 (154259053-154258854) | |
| 512-660, gnl|tetNig1|chr10 (6905621-6905440) | |
| 512-660, gnl|xenTro1|scaffold_442 (890135-890313) | |
| 750-895, gnl|bosTau2|chr2 (81709313-81709458) | |
| 750-895, gnl|canFam2|chr2 (78096740-78096604) | |
| 750-895, gnl|danRer3|chr17 (32269892-32269759) | |
| 750-895, gnl|dasNov1|scaffold_40433 (3392-3535) | |
| 750-895, gnl|echTel1|scaffold_320618 (201662-201802) | |
| 750-895, gnl|fr1|chrUn (55319537-55319417) | |
| 750-895, gnl|galGal2|chr23 (5143213-5143338) | |
| 750-895, gnl|hg17|chr1 (24521262-24521395) | |
| 750-895, gnl|Hg17|chr1 (24521277-24521422) | |
| 750-895, gnl|loxAfr1|scaffold_192 (15945-16084) | |
| 750-895, gnl|mm7|chr4 (134852923-134852790) | |
| 750-895, gnl|Mm7|chr4 (134852906-134852761) | |
| 750-895, gnl|monDom2|scaffold_91 (1267815-1267948) | |
| 750-895, gnl|oryCun1|scaffold_199132 (26705-26839) | |
| 750-895, gnl|panTro1|chr1 (24915912-24916045) | |
| 750-895, gnl|rheMac2|chr1 (27086592-27086725) | |
| 750-895, gnl|rn3|chr5 (154253801-154253668) | |
| 750-895, gnl|tetNig1|chr10 (6904806-6904686) | |
| 750-895, gnl|xenTro1|scaffold_442 (893174-893309) | |
| 992-1130, gnl|bosTau2|chr2 (81716580-81716718) | |
| 992-1130, gnl|canFam2|chr2 (78090440-78090275) | |
| 992-1130, gnl|danRer3|chr17 (32268722-32268568) | |
| 992-1130, gnl|dasNov1|scaffold_40433 (12022-12187) | |
| 992-1130, gnl|echTel1|scaffold_320618 (208218-208377) | |
| 992-1130, gnl|fr1|chrUn (55318746-55318597) | |
| 992-1130, gnl|galGal2|chr23 (5144497-5144652) | |
| 992-1130, gnl|hg17|chr1 (24527916-24528081) | |
| 992-1130, gnl|Hg17|chr1 (24527933-24528071) | |
| 992-1130, gnl|loxAfr1|scaffold_68832 (9544-9702) | |
| 992-1130, gnl|mm7|chr4 (134847098-134846936) | |
| 992-1130, gnl|Mm7|chr4 (134847079-134846941) | |
| 992-1130, gnl|monDom2|scaffold_91 (1277091-1277244) | |
| 992-1130, gnl|oryCun1|scaffold_199132 (32053-32218) | |
| 992-1130, gnl|panTro1|chr1 (24922584-24922749) | |
| 992-1130, gnl|rheMac2|chr1 (27092917-27093082) | |
| 992-1130, gnl|rn3|chr7 (70052366-70052208) | |
| 992-1130, gnl|tetNig1|chr10 (6904002-6903854) | |
| 992-1130, gnl|xenTro1|scaffold_442 (897188-897342) |