Non-Coding RNA Search

Ss1.1-Pig2-110K15.5

Sequence:


               
               TTTTTTTTTTTTTTTTTTTTTGGTCATGAAGCCATGTCATTTTATCATATGTAAATGAAT
CAAATTATTCAACAACCTGTAGTTTTAAGGGGGGGATACTGTATTGGGGCAGAGGAATGG
AGTATAACATACCACTGAAAATTGCATGCAGTCAGCCACACCAATTCTTACAAATTCCTA
AGTCAAAGACCTTATTTTCAAAGTGCAAAAATATTACAAAATCACTTCATTATATAGATA
ACACAGTTTTCTTTTGTCTTTTCAGTTATTTTGACTAACTGAGGATTTGAACCTATATGC
TAACTTCTGTTAACTAATATCTTTTGGGGACTTTTCATTTGCCTTAAAAGGGTTCTATTT
TTCCCTTTCCCATTCTGTGACACAAATATCTTTAAAGGCCTATCGTGCATTTAGGAGTCC
TTATATTCAGAAACACCAGCATTTTTCTAATGCTAAAGGTAATAGGCAAGTATCTGATGT
TATTCATCCCTTCAATGCAAGTTTTTTACCACACACACAATAACTTTCTTACCAATCATT
GGGGGAAAAATAATTCCTGGAGTACTTCTGAATTCAAAAGAAAGTATCAATTCATTAGGT
TTCTCTGAAGCTATAAAGAACAATTTTGCTTTGGTTTCTTGTTTAATTTACTCACTGATA
CTCCAACACAAATGTTTGGATGAAATTACTTTAGCAGATCTATGCCAGGCATTAGTTATT
CATGTGGCTTTGCAATAACATTGG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               TTTTTTTTTTTTTTTTTTTTTGGTCATGAAGCCATGTCATTTTATCATATGTAAATGAAT
CAAATTATTCAACAACCTGTAGTTTTAAGGGGGGGATACTGTATTGGGGCAGAGGAATGG
AGTATAACATACCACTGAAAATTGCATGCAGTCAGCCACACCAATTCTTACAAATTCCTA
AGTCAAAGACCTTATTTTCAAAGTGCAAAAATATTACAAAATCACTTCATTATATAGATA
ACACAGTTTTCTTTTGTCTTTTCAGTTATTTTGACTAACTGAGGATTTGAACCTATATGC
TAACTTCTGTTAACTAATATCTTTTGGGGACTTTTCATTTGCCTTAAAAGGGTTCTATTT
TTCCCTTTCCCATTCTGTGACACAAATATCTTTAAAGGCCTATCGTGCATTTAGGAGTCC
TTATATTCAGAAACACCAGCATTTTTCTAATGCTAAAGGTAATAGGCAAGTATCTGATGT
TATTCATCCCTTCAATGCAAGTTTTTTACCACACACACAATAACTTTCTTACCAATCATT
GGGGGAAAAATAATTCCTGGAGTACTTCTGAATTCAAAAGAAAGTATCAATTCATTAGGT
TTCTCTGAAGCTATAAAGAACAATTTTGCTTTGGTTTCTTGTTTAATTTACTCACTGATA
CTCCAACACAAATGTTTGGATGAAATTACTTTAGCAGATCTATGCCAGGCATTAGTTATT
CATGTGGCTTTGCAATAACATTGG

Aligned organism(s): 8 entry(ies)

More info

Aligned organism(s): 8 entry(ies)

Help | Less info


               
               25-291, gnl|bosTau2|chr10 (39616281-39616024)
               

               
               25-291, gnl|Hg17|chr15 (54361388-54361120)
               


               
               313-742, gnl|bosTau2|chr10 (39615789-39615360)
               

               
               313-742, gnl|canFam2|chr30 (24478048-24478733)
               

               
               313-742, gnl|hg17|chr15 (54360070-54360769)
               

               
               313-742, gnl|Hg17|chr15 (54360762-54360319)
               

               
               313-742, gnl|panTro1|chr16 (54707961-54708659)
               

               
               313-742, gnl|rheMac2|chr7 (34601462-34602163)

Aligned organism(s): 8 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-291, gnl|bosTau2|chr10 (39616281-39616024)
               

               
               25-291, gnl|Hg17|chr15 (54361388-54361120)
               


               
               313-742, gnl|bosTau2|chr10 (39615789-39615360)
               

               
               313-742, gnl|canFam2|chr30 (24478048-24478733)
               

               
               313-742, gnl|hg17|chr15 (54360070-54360769)
               

               
               313-742, gnl|Hg17|chr15 (54360762-54360319)
               

               
               313-742, gnl|panTro1|chr16 (54707961-54708659)
               

               
               313-742, gnl|rheMac2|chr7 (34601462-34602163)

	25-291, gnl\|bosTau2\|chr10 (39616281-39616024)
	25-291, gnl\|Hg17\|chr15 (54361388-54361120)

	313-742, gnl\|bosTau2\|chr10 (39615789-39615360)
	313-742, gnl\|canFam2\|chr30 (24478048-24478733)
	313-742, gnl\|hg17\|chr15 (54360070-54360769)
	313-742, gnl\|Hg17\|chr15 (54360762-54360319)
	313-742, gnl\|panTro1\|chr16 (54707961-54708659)
	313-742, gnl\|rheMac2\|chr7 (34601462-34602163)