Ss1.1-Pig2-111E13.5
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TGTATCTTCTCATCTTGAGTCACACAGCCAAGAGATGACTGAGCAGGGATTTGAATCCAG
GTAGTCAAGCTCCAGACCCCATACTCCGGACACTACCTTATCTTACTTCAGTCGCGGTAA
CATGACCTCAGCGATCTCACATATACGTTTGTTTCTCCCTCGTGTCACTGTCCAAGGCAA
GTCTGGCAGCTCTCCTGCGAGGCTGGTTACTCTGGAACCCAAACTCCTTCCATTTTGTGA
TGTTGGGATTGTATCAGTGGCATCTAAACTCACTCTTCAGCTCTGCTCTTGTTTCACTGA
TAAGAGCTAGTCCATAGTCCCACATCCGTGCAAGGGAGGCTGGGAAATGTAGTCTCTGGC
CAGGCAATTGCTTCCCAGAAGCAACTCTGCTCGTGTGTGTGCGCGCGTGTGTTTTCCTCT
CTCCGCCTGCAAAAAAGGCTCGGTCCCACTGCTCTCTGCACCGCGTAAGTATCTTCTCCC
CTCGCGAGTCCCCTCCCCTTTTCCAGAATCACTTGCACCGGCTTGTTCTTTCACTTCTCC
TTTTTAACCCCAGCAGAGGGCCAGGGAGTCGGGAGGAAGGGAGAGGGAGGAGGGGGGCGC
TCTATTACTTTCCTCTCCGACCGCTGTCGAAGGCGAAATGTTGAAATGCGGCTTGGAGCA
GTGGCGAGATGGTCCCGGGAAACGAGCGCGGCGCCCCTCTCCCGAGCTCCCAGGACCCAG
GGGCTGGGTCAAGTTGCGTAGGGGGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAG
CTTTTGAAGATGGCACAATAACTGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTT
AAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGTAGGGACAGC
ATCTGCATTTTTTGCTAAGGCAAGAGCAACGTTTTTTAGTGCCATGAATCCCCAAGGTTC
CGAGCAGGATGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACT
CCGCAAGCTGCTGAAGAGGGCGAACTCGTATGAAGATGCCATGATGCCTTTTCCAGGAGC
AACCATAATTTCCCAGCTGTTGAAAAATAACATGAACAAAAATGGTGGCACGGAGCCCAG
TTTCCAAGCCAGCGGTCTCTCTAGTACAGGCTCCGAAGTACATCAGGAGGATATATGCAG
CAACTCTTCAAGAGACAGCCCCCCTGAGTGTCTTTCCCCTTTTGGCAGGCCTACTATGAG
CCAGTTTGATATGGATCGCTTGTGTGACGAGCACCT
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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TGTATCTTCTCATCTTGAGTCACACAGCCAAGAGATGACTGAGCAGGGATTTGAATCCAG
GTAGTCAAGCTCCAGACCCCATACTCCGGACACTACCTTATCTTACTTCAGTCGCGGTAA
CATGACCTCAGCGATCTCACATATACGTTTGTTTCTCCCTCGTGTCACTGTCCAAGGCAA
GTCTGGCAGCTCTCCTGCGAGGCTGGTTACTCTGGAACCCAAACTCCTTCCATTTTGTGA
TGTTGGGATTGTATCAGTGGCATCTAAACTCACTCTTCAGCTCTGCTCTTGTTTCACTGA
TAAGAGCTAGTCCATAGTCCCACATCCGTGCAAGGGAGGCTGGGAAATGTAGTCTCTGGC
CAGGCAATTGCTTCCCAGAAGCAACTCTGCTCGTGTGTGTGCGCGCGTGTGTTTTCCTCT
CTCCGCCTGCAAAAAAGGCTCGGTCCCACTGCTCTCTGCACCGCGTAAGTATCTTCTCCC
CTCGCGAGTCCCCTCCCCTTTTCCAGAATCACTTGCACCGGCTTGTTCTTTCACTTCTCC
TTTTTAACCCCAGCAGAGGGCCAGGGAGTCGGGAGGAAGGGAGAGGGAGGAGGGGGGCGC
TCTATTACTTTCCTCTCCGACCGCTGTCGAAGGCGAAATGTTGAAATGCGGCTTGGAGCA
GTGGCGAGATGGTCCCGGGAAACGAGCGCGGCGCCCCTCTCCCGAGCTCCCAGGACCCAG
GGGCTGGGTCAAGTTGCGTAGGGGGGTCCCGGGATTCTTGAGCTGTGCCCAGCTGACGAG
CTTTTGAAGATGGCACAATAACTGTCCAGTGATGCCTGACCATGACAGCACAGCCCTCTT
AAGCCGGCAAACCAAGAGGAGAAGAGTTGACATTGGAGTGAAAAGGACGGTAGGGACAGC
ATCTGCATTTTTTGCTAAGGCAAGAGCAACGTTTTTTAGTGCCATGAATCCCCAAGGTTC
CGAGCAGGATGTTGAGTATTCAGTGGTGCAGCATGCAGATGGGGAAAAGTCAAATGTACT
CCGCAAGCTGCTGAAGAGGGCGAACTCGTATGAAGATGCCATGATGCCTTTTCCAGGAGC
AACCATAATTTCCCAGCTGTTGAAAAATAACATGAACAAAAATGGTGGCACGGAGCCCAG
TTTCCAAGCCAGCGGTCTCTCTAGTACAGGCTCCGAAGTACATCAGGAGGATATATGCAG
CAACTCTTCAAGAGACAGCCCCCCTGAGTGTCTTTCCCCTTTTGGCAGGCCTACTATGAG
CCAGTTTGATATGGATCGCTTGTGTGACGAGCACCT
|
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374-530, gnl|bosTau2|chr16 (51853686-51853514) |
|
374-530, gnl|Hg17|chr1 (210550088-210550290) |
|
374-530, gnl|Mm7|chr1 (189702719-189702514) |
| |
|
557-743, gnl|bosTau2|chr16 (51852857-51852672) |
|
557-743, gnl|canFam2|chr7 (14956415-14956620) |
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557-743, gnl|dasNov1|scaffold_197862 (174-16) |
|
557-743, gnl|echTel1|scaffold_316168 (162646-162823) |
|
557-743, gnl|hg17|chr1 (210550859-210551007) |
|
557-743, gnl|Hg17|chr1 (210550883-210551048) |
|
557-743, gnl|loxAfr1|scaffold_120502 (5101-5250) |
|
557-743, gnl|mm7|chr1 (189701911-189701755) |
|
557-743, gnl|Mm7|chr1 (189701899-189701712) |
|
557-743, gnl|monDom2|scaffold_13 (18389098-18389236) |
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557-743, gnl|oryCun1|scaffold_198459 (130182-130036) |
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557-743, gnl|panTro1|chr1 (194258074-194258222) |
|
557-743, gnl|rheMac2|chr1 (156464920-156464772) |
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557-743, gnl|rn3|chr13 (106659377-106659226) |
| |
|
744-1296, gnl|bosTau2|chr16 (51845331-51844779) |
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744-1296, gnl|Hg17|chr1 (210558206-210558758) |
|
744-1296, gnl|Mm7|chr1 (189694626-189694074) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
374-530, gnl|bosTau2|chr16 (51853686-51853514) |
|
374-530, gnl|Hg17|chr1 (210550088-210550290) |
|
374-530, gnl|Mm7|chr1 (189702719-189702514) |
| |
|
557-743, gnl|bosTau2|chr16 (51852857-51852672) |
|
557-743, gnl|canFam2|chr7 (14956415-14956620) |
|
557-743, gnl|dasNov1|scaffold_197862 (174-16) |
|
557-743, gnl|echTel1|scaffold_316168 (162646-162823) |
|
557-743, gnl|hg17|chr1 (210550859-210551007) |
|
557-743, gnl|Hg17|chr1 (210550883-210551048) |
|
557-743, gnl|loxAfr1|scaffold_120502 (5101-5250) |
|
557-743, gnl|mm7|chr1 (189701911-189701755) |
|
557-743, gnl|Mm7|chr1 (189701899-189701712) |
|
557-743, gnl|monDom2|scaffold_13 (18389098-18389236) |
|
557-743, gnl|oryCun1|scaffold_198459 (130182-130036) |
|
557-743, gnl|panTro1|chr1 (194258074-194258222) |
|
557-743, gnl|rheMac2|chr1 (156464920-156464772) |
|
557-743, gnl|rn3|chr13 (106659377-106659226) |
| |
|
744-1296, gnl|bosTau2|chr16 (51845331-51844779) |
|
744-1296, gnl|Hg17|chr1 (210558206-210558758) |
|
744-1296, gnl|Mm7|chr1 (189694626-189694074) |
