Non-Coding RNA Search

Ss1.1-Pig2-114P13.5

Sequence:


               
               GCGGACGCGTGGGCTCACTCTCAGCTCAGGAAGCAAACACTGACTCTCTCTGTTCTCTTA
GATCTTCCTTCCGTTCCAGGGGGTCAGGTGGGTGGGATAACGTGGTGCAGGAATGTCAGG
CCCCCTCCCGGAAGCCTGGCTTCTATTTCATCTCATTACCGAACAGAAGTCGCTTTTTGT
TTCCCTGCCTGGGTTGCAAACAACCACCCAGTCCTCTTTCCTTTCTTCATGCCATTTTTC
ACGGCATCCACGTGGGATGGGAACAGAGGCAGTGTGTTTGGAGACTGTGTGTGTGCTGCC
CAATCCTTGCCGCCTTGTGCAGAAAGCCTGTGCAGACAGCCCCACCACATAGCTGCCTCC
CATTTGTTCTGCAGGACCTCGTGGAGGGACTGGAATGAAGGTTGTGAGGTTGTAGTTGCT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCGGACGCGTGGGCTCACTCTCAGCTCAGGAAGCAAACACTGACTCTCTCTGTTCTCTTA
GATCTTCCTTCCGTTCCAGGGGGTCAGGTGGGTGGGATAACGTGGTGCAGGAATGTCAGG
CCCCCTCCCGGAAGCCTGGCTTCTATTTCATCTCATTACCGAACAGAAGTCGCTTTTTGT
TTCCCTGCCTGGGTTGCAAACAACCACCCAGTCCTCTTTCCTTTCTTCATGCCATTTTTC
ACGGCATCCACGTGGGATGGGAACAGAGGCAGTGTGTTTGGAGACTGTGTGTGTGCTGCC
CAATCCTTGCCGCCTTGTGCAGAAAGCCTGTGCAGACAGCCCCACCACATAGCTGCCTCC
CATTTGTTCTGCAGGACCTCGTGGAGGGACTGGAATGAAGGTTGTGAGGTTGTAGTTGCT

Predicted RNA structure(s): 1 entry(ies)

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Predicted RNA structure(s): 1 entry(ies)

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               104-223, - strand, RNAz p=0.741534

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               104-223, - strand, RNAz p=0.741534

Aligned organism(s): 3 entry(ies)

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Aligned organism(s): 3 entry(ies)

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               27-286, gnl|bosTau2|chr21 (2080186-2079926)
               

               
               27-286, gnl|Hg17|chr15 (97078817-97079075)
               

               
               27-286, gnl|Mm7|chr7 (63868171-63868438)

Aligned organism(s): 3 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               27-286, gnl|bosTau2|chr21 (2080186-2079926)
               

               
               27-286, gnl|Hg17|chr15 (97078817-97079075)
               

               
               27-286, gnl|Mm7|chr7 (63868171-63868438)

	27-286, gnl\|bosTau2\|chr21 (2080186-2079926)
	27-286, gnl\|Hg17\|chr15 (97078817-97079075)
	27-286, gnl\|Mm7\|chr7 (63868171-63868438)