Non-Coding RNA Search

Ss1.1-Pig2-11K04.5

Sequence:


               
               GCCCACGCGTCCGCCCACGCGTCCGGAATTTTTCTCCTTTAGAAATGAATTGGCTTAATT
AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAGAGAG
GGTTAATCGGAGTCAGGTCTGGAATCTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAA
CCAATCAACCCTACAAGAAACGGAGGAAATGAAATAGAATTTATATTCTCTGTGCTATTA
TCCTGGACGGAAATTCCTTGGAAGCAGCCACCTGGTTGGGTGTAGAACAGACTGTTTCAT
TTCAGAATTTTCACAGAAACTTTGAAAGGTTTATCTGGTTACCCAAGAAGAATTTCAAAT

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               GCCCACGCGTCCGCCCACGCGTCCGGAATTTTTCTCCTTTAGAAATGAATTGGCTTAATT
AGTAAGTAGATTAATGGCAATTGCTGGTGAGTTGGTTTCCAGCAGAGTTTCACCAGAGAG
GGTTAATCGGAGTCAGGTCTGGAATCTTTCCCAGAACTGGCTGCCAGCCATTTCCACCAA
CCAATCAACCCTACAAGAAACGGAGGAAATGAAATAGAATTTATATTCTCTGTGCTATTA
TCCTGGACGGAAATTCCTTGGAAGCAGCCACCTGGTTGGGTGTAGAACAGACTGTTTCAT
TTCAGAATTTTCACAGAAACTTTGAAAGGTTTATCTGGTTACCCAAGAAGAATTTCAAAT

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

Help | Less info


               
               25-263, + strand, RNAz p=0.970277

Predicted RNA structure(s): 1 entry(ies)

Help | Less info

PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               25-263, + strand, RNAz p=0.970277

Aligned organism(s): 3 entry(ies)

More info

Aligned organism(s): 3 entry(ies)

Help | Less info


               
               25-332, gnl|bosTau2|chr13 (18221406-18221713)
               

               
               25-332, gnl|Hg17|chr10 (23531996-23531697)
               

               
               25-332, gnl|Mm7|chr2 (19521332-19521036)

Aligned organism(s): 3 entry(ies)

Help | Less info

PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               25-332, gnl|bosTau2|chr13 (18221406-18221713)
               

               
               25-332, gnl|Hg17|chr10 (23531996-23531697)
               

               
               25-332, gnl|Mm7|chr2 (19521332-19521036)

	25-332, gnl\|bosTau2\|chr13 (18221406-18221713)
	25-332, gnl\|Hg17\|chr10 (23531996-23531697)
	25-332, gnl\|Mm7\|chr2 (19521332-19521036)