Ss1.1-Pig2-121L12.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCTGAGCAAGGCCTATGAGGCAGAGTGTGACGATTACAGCATCATCATGGTCAAGGCGCT GGGGGACCGGCTAGCTGAGGCCTTCGCTGAGGAGCTGCACGAGAGGGTGCGCAAGGAGCT GTGGGGCTACTGTGGCGGCGAGCAGCTGGCCGTGGCTGACCTTCGGAGGCTGCGCTTTGA GGGCATCCGGCCGGCGCCCGGCTACCCCAGCCAGCCCGACCACACCGAGAAGCTGACCAT GTGGAAGCTCGCAGACGTGGAGCGGCTCACAGGCATTAGGCTGACAGAGTCGCTGGCGAT GGCTCCTGCTTCAGCAGTGTCCGGCCTTTACTTCTCCAATGTGAAGTCCAAGTACTTTGC CGTGGGGAAAATTTCCAAGGATCAGATTGAGGATTATGCTTTGAGGAAGAACATGACTGT GGCCGAGGTTGAGAAGTGGCTTGGACCCATTTTGGGATATGATACAGACTAACTTCTTTT TTTTTCTTTTTTCCAACCTTGTCTGTGCTTGATGCTCCCTGAGGAAATAAGAGTCCAAAG TGCCTTAACAAGAGTGGTGCAGCG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCTGAGCAAGGCCTATGAGGCAGAGTGTGACGATTACAGCATCATCATGGTCAAGGCGCT GGGGGACCGGCTAGCTGAGGCCTTCGCTGAGGAGCTGCACGAGAGGGTGCGCAAGGAGCT GTGGGGCTACTGTGGCGGCGAGCAGCTGGCCGTGGCTGACCTTCGGAGGCTGCGCTTTGA GGGCATCCGGCCGGCGCCCGGCTACCCCAGCCAGCCCGACCACACCGAGAAGCTGACCAT GTGGAAGCTCGCAGACGTGGAGCGGCTCACAGGCATTAGGCTGACAGAGTCGCTGGCGAT GGCTCCTGCTTCAGCAGTGTCCGGCCTTTACTTCTCCAATGTGAAGTCCAAGTACTTTGC CGTGGGGAAAATTTCCAAGGATCAGATTGAGGATTATGCTTTGAGGAAGAACATGACTGT GGCCGAGGTTGAGAAGTGGCTTGGACCCATTTTGGGATATGATACAGACTAACTTCTTTT TTTTTCTTTTTTCCAACCTTGTCTGTGCTTGATGCTCCCTGAGGAAATAAGAGTCCAAAG TGCCTTAACAAGAGTGGTGCAGCG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | More info |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
| 429-545, + strand, RNAz p=0.829389 | |
| 445-545, + strand, RNAz p=0.587744 |
| Predicted RNA structure(s): 2 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 429-545, + strand, RNAz p=0.829389 | |
| 445-545, + strand, RNAz p=0.587744 |
| Homologous human UTR: 1 entry(ies) | More info |
| Homologous human UTR: 1 entry(ies) | Help | Less info |
Human gene identifier and UTR site,
human gene reading direction
human gene reading direction
| 3' of NM_000254, + |
| Aligned organism(s): 36 entry(ies) | More info |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
| 78-273, gnl|bosTau2|chr28 (5087824-5088019) | |
| 78-273, gnl|canFam2|chr4 (6224673-6224528) | |
| 78-273, gnl|danRer3|chrNA (16592926-16592794) | |
| 78-273, gnl|dasNov1|scaffold_10189 (56789-56923) | |
| 78-273, gnl|fr1|chrUn (183647171-183647039) | |
| 78-273, gnl|galGal2|chr3 (34000541-34000395) | |
| 78-273, gnl|hg17|chr1 (233384684-233384830) | |
| 78-273, gnl|Hg17|chr1 (233384697-233384892) | |
| 78-273, gnl|loxAfr1|scaffold_114 (9164-9310) | |
| 78-273, gnl|mm7|chr13 (12151473-12151327) | |
| 78-273, gnl|Mm7|chr13 (12151458-12151263) | |
| 78-273, gnl|monDom2|scaffold_13 (48464479-48464336) | |
| 78-273, gnl|oryCun1|scaffold_202492 (804-950) | |
| 78-273, gnl|panTro1|chr1 (217228370-217228516) | |
| 78-273, gnl|rheMac2|chr1 (220138053-220137907) | |
| 78-273, gnl|rn3|chr17 (68875157-68875303) | |
| 78-273, gnl|tetNig1|chrUn_random (41817329-41817461) | |
| 78-273, gnl|xenTro1|scaffold_41 (865611-865759) | |
| 383-545, gnl|bosTau2|chr28 (5090027-5090179) | |
| 383-545, gnl|canFam2|chr4 (6222631-6222532) | |
| 383-545, gnl|dasNov1|scaffold_10189 (58806-58905) | |
| 383-545, gnl|echTel1|scaffold_318188 (5303-5204) | |
| 383-545, gnl|fr1|chrUn (183645438-183645348) | |
| 383-545, gnl|galGal2|chr3 (33999353-33999254) | |
| 383-545, gnl|hg17|chr1 (233386891-233386990) | |
| 383-545, gnl|Hg17|chr1 (233386896-233387050) | |
| 383-545, gnl|loxAfr1|scaffold_114 (11528-11627) | |
| 383-545, gnl|mm7|chr13 (12149018-12148916) | |
| 383-545, gnl|Mm7|chr13 (12149011-12148835) | |
| 383-545, gnl|monDom2|scaffold_13 (48461673-48461574) | |
| 383-545, gnl|oryCun1|scaffold_202492 (3303-3405) | |
| 383-545, gnl|panTro1|chr1 (217230557-217230657) | |
| 383-545, gnl|rheMac2|chr1 (220135848-220135741) | |
| 383-545, gnl|rn3|chr17 (68877403-68877504) | |
| 383-545, gnl|tetNig1|chrUn_random (41818388-41818478) | |
| 383-545, gnl|xenTro1|scaffold_41 (867607-867725) |
| Aligned organism(s): 36 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 78-273, gnl|bosTau2|chr28 (5087824-5088019) | |
| 78-273, gnl|canFam2|chr4 (6224673-6224528) | |
| 78-273, gnl|danRer3|chrNA (16592926-16592794) | |
| 78-273, gnl|dasNov1|scaffold_10189 (56789-56923) | |
| 78-273, gnl|fr1|chrUn (183647171-183647039) | |
| 78-273, gnl|galGal2|chr3 (34000541-34000395) | |
| 78-273, gnl|hg17|chr1 (233384684-233384830) | |
| 78-273, gnl|Hg17|chr1 (233384697-233384892) | |
| 78-273, gnl|loxAfr1|scaffold_114 (9164-9310) | |
| 78-273, gnl|mm7|chr13 (12151473-12151327) | |
| 78-273, gnl|Mm7|chr13 (12151458-12151263) | |
| 78-273, gnl|monDom2|scaffold_13 (48464479-48464336) | |
| 78-273, gnl|oryCun1|scaffold_202492 (804-950) | |
| 78-273, gnl|panTro1|chr1 (217228370-217228516) | |
| 78-273, gnl|rheMac2|chr1 (220138053-220137907) | |
| 78-273, gnl|rn3|chr17 (68875157-68875303) | |
| 78-273, gnl|tetNig1|chrUn_random (41817329-41817461) | |
| 78-273, gnl|xenTro1|scaffold_41 (865611-865759) | |
| 383-545, gnl|bosTau2|chr28 (5090027-5090179) | |
| 383-545, gnl|canFam2|chr4 (6222631-6222532) | |
| 383-545, gnl|dasNov1|scaffold_10189 (58806-58905) | |
| 383-545, gnl|echTel1|scaffold_318188 (5303-5204) | |
| 383-545, gnl|fr1|chrUn (183645438-183645348) | |
| 383-545, gnl|galGal2|chr3 (33999353-33999254) | |
| 383-545, gnl|hg17|chr1 (233386891-233386990) | |
| 383-545, gnl|Hg17|chr1 (233386896-233387050) | |
| 383-545, gnl|loxAfr1|scaffold_114 (11528-11627) | |
| 383-545, gnl|mm7|chr13 (12149018-12148916) | |
| 383-545, gnl|Mm7|chr13 (12149011-12148835) | |
| 383-545, gnl|monDom2|scaffold_13 (48461673-48461574) | |
| 383-545, gnl|oryCun1|scaffold_202492 (3303-3405) | |
| 383-545, gnl|panTro1|chr1 (217230557-217230657) | |
| 383-545, gnl|rheMac2|chr1 (220135848-220135741) | |
| 383-545, gnl|rn3|chr17 (68877403-68877504) | |
| 383-545, gnl|tetNig1|chrUn_random (41818388-41818478) | |
| 383-545, gnl|xenTro1|scaffold_41 (867607-867725) |