Ss1.1-Pig2-122F15.5
|
AGCACGTGGCATGCCTGGATGTCCCTGCCCTGGCTGTGGCATGGCAGGACAAAGGCTCCT
CTTGCTCACTGCTCTTGCCCTGGAGCTCCTGGGAGGGGCTGGGGGATCCCAACAGGCCCT
CCGGAGCCAGGGGGTGGCAGCGGCCTGTCGCCTGGACAGTAAGGAAAGTGAGTCCTGGGG
GGCCCTGCTGAGCGGAGAGAGGCTGGACACCTGGATCTGCTCCCTCCTGGGCTCACTTTT
GGTGGGGCTCAGCGGGGTCTTTCCGTTGCTCGTCATTCCCTTGGAGATGGGGACCACGCT
GCGCTCGGAAGCTGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTTGCCTTGGGAGGACT
CCTGGGCAATGTGTTTCTCCACCTGCTGCCTGAGGCGTGGGCCTACACGTACAGCGCCGG
CCCTGGTGGTGAGGGGCAGAGCCTACAGCAGCAGCAGCAACTGGGACTTTGGGTCATTGC
TGGCTTCCTGACATTCCTGGCGTTGGAGAAGATGTTCTTGGACGGCAAGGAGAAGGAGGC
GACTAGCCAGGCCCCCAGCAAAGACCCCGCAGCTGCTGCCGCGCTCAATGGAGGCCACTC
TCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGCGCCGTGGTCCGGAACATCAAAGTCAG
TGGCTATCTCAACCTGCTGGCCAACACCATAGACAACTTCACTCATGGGCTGGCTGTGGC
TGCCAGCTTCCTTGTGAGCAAGAAGATCGGGTTCCTGACCACCATGGCTATCCTGCTGCA |
Blue-coloured subsequences are predicted RNA structures by RNAz
|
AGCACGTGGCATGCCTGGATGTCCCTGCCCTGGCTGTGGCATGGCAGGACAAAGGCTCCT
CTTGCTCACTGCTCTTGCCCTGGAGCTCCTGGGAGGGGCTGGGGGATCCCAACAGGCCCT
CCGGAGCCAGGGGGTGGCAGCGGCCTGTCGCCTGGACAGTAAGGAAAGTGAGTCCTGGGG
GGCCCTGCTGAGCGGAGAGAGGCTGGACACCTGGATCTGCTCCCTCCTGGGCTCACTTTT
GGTGGGGCTCAGCGGGGTCTTTCCGTTGCTCGTCATTCCCTTGGAGATGGGGACCACGCT
GCGCTCGGAAGCTGGGGCCTGGCGCCTGAAGCAGCTGCTCAGCTTTGCCTTGGGAGGACT
CCTGGGCAATGTGTTTCTCCACCTGCTGCCTGAGGCGTGGGCCTACACGTACAGCGCCGG
CCCTGGTGGTGAGGGGCAGAGCCTACAGCAGCAGCAGCAACTGGGACTTTGGGTCATTGC
TGGCTTCCTGACATTCCTGGCGTTGGAGAAGATGTTCTTGGACGGCAAGGAGAAGGAGGC
GACTAGCCAGGCCCCCAGCAAAGACCCCGCAGCTGCTGCCGCGCTCAATGGAGGCCACTC
TCTGGCCCAGCCGGCTGCAGAGCCCGGCCTGAGCGCCGTGGTCCGGAACATCAAAGTCAG
TGGCTATCTCAACCTGCTGGCCAACACCATAGACAACTTCACTCATGGGCTGGCTGTGGC
TGCCAGCTTCCTTGTGAGCAAGAAGATCGGGTTCCTGACCACCATGGCTATCCTGCTGCA |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
1-311, gnl|bosTau2|chr15 (48902844-48902534) |
|
1-311, gnl|Hg17|chr11 (47388212-47388522) |
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1-311, gnl|Mm7|chr2 (90919457-90919147) |
| |
|
549-664, gnl|bosTau2|chr15 (48899782-48899667) |
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549-664, gnl|canFam2|chr18 (45258828-45258677) |
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549-664, gnl|dasNov1|scaffold_171168 (301-152) |
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549-664, gnl|echTel1|scaffold_306857 (813-948) |
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549-664, gnl|fr1|chrUn (261926070-261926203) |
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549-664, gnl|hg17|chr11 (47391477-47391630) |
|
549-664, gnl|Hg17|chr11 (47391525-47391643) |
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549-664, gnl|mm7|chr2 (90915775-90915628) |
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549-664, gnl|Mm7|chr2 (90915725-90915613) |
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549-664, gnl|monDom2|scaffold_33 (13273846-13273994) |
|
549-664, gnl|oryCun1|scaffold_185845 (6259-6100) |
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549-664, gnl|panTro1|chr9 (47910466-47910619) |
|
549-664, gnl|rheMac2|chr14 (24705206-24705053) |
|
549-664, gnl|rn3|chr3 (75320438-75320292) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
1-311, gnl|bosTau2|chr15 (48902844-48902534) |
|
1-311, gnl|Hg17|chr11 (47388212-47388522) |
|
1-311, gnl|Mm7|chr2 (90919457-90919147) |
| |
|
549-664, gnl|bosTau2|chr15 (48899782-48899667) |
|
549-664, gnl|canFam2|chr18 (45258828-45258677) |
|
549-664, gnl|dasNov1|scaffold_171168 (301-152) |
|
549-664, gnl|echTel1|scaffold_306857 (813-948) |
|
549-664, gnl|fr1|chrUn (261926070-261926203) |
|
549-664, gnl|hg17|chr11 (47391477-47391630) |
|
549-664, gnl|Hg17|chr11 (47391525-47391643) |
|
549-664, gnl|mm7|chr2 (90915775-90915628) |
|
549-664, gnl|Mm7|chr2 (90915725-90915613) |
|
549-664, gnl|monDom2|scaffold_33 (13273846-13273994) |
|
549-664, gnl|oryCun1|scaffold_185845 (6259-6100) |
|
549-664, gnl|panTro1|chr9 (47910466-47910619) |
|
549-664, gnl|rheMac2|chr14 (24705206-24705053) |
|
549-664, gnl|rn3|chr3 (75320438-75320292) |
