Ss1.1-Pig2-123H17.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| AGATCAAGTGCTTCATCCGGGGCACACCACCACCTGACCGCATCGCCTGGTCCTGGAAGG AGAATGTGCTGGAGTCGGGGACGTCAGGGCGCTACACGGTGGAGACAGTCAGCACCGAGG AGGGTGTCATCTCCACGCTGACCATCAGCAACATCGTGCGAGCGGACTTCCAGACCATCT ACAACTGCACCGCCTGGAACAGCTTCGGCTCCGACACGGAGATCATCCGACTCAAAGAGC AAGGTTCGGAAATGAAGTCGGGAGCCGGGCTGGAAGCAGAGTCCGTGCCGATGGCCGTCA TCATTGGGGTGGCCGTAGGAGCTGGCGTGGCCTTCCTCGTCCTTCTGGCAACTATTGTGG CCTTCTGCTGTGCCCGCTCCCAGAGAAATCTCAAAGGCGTTGTGTCAGCCAAGAATGATA TCCGGGTGGAGATTGTCCACAAGGAGCCTGCCTCTGGCCGGGAGGCTGAGGAACACCCCA CCATCAAGCAGCTGATGATGGACCGGGGCGAATTCCAACAAGATTCAGTCCTGAAGCAGC TGGAGGTGCTCACCAGAACCAGAGGCCTCCTGATGCTCTAGACGGTCCTGAGAAGCAAAG CATCAGTCAAGACGTGCTTCTCCC |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| AGATCAAGTGCTTCATCCGGGGCACACCACCACCTGACCGCATCGCCTGGTCCTGGAAGG AGAATGTGCTGGAGTCGGGGACGTCAGGGCGCTACACGGTGGAGACAGTCAGCACCGAGG AGGGTGTCATCTCCACGCTGACCATCAGCAACATCGTGCGAGCGGACTTCCAGACCATCT ACAACTGCACCGCCTGGAACAGCTTCGGCTCCGACACGGAGATCATCCGACTCAAAGAGC AAGGTTCGGAAATGAAGTCGGGAGCCGGGCTGGAAGCAGAGTCCGTGCCGATGGCCGTCA TCATTGGGGTGGCCGTAGGAGCTGGCGTGGCCTTCCTCGTCCTTCTGGCAACTATTGTGG CCTTCTGCTGTGCCCGCTCCCAGAGAAATCTCAAAGGCGTTGTGTCAGCCAAGAATGATA TCCGGGTGGAGATTGTCCACAAGGAGCCTGCCTCTGGCCGGGAGGCTGAGGAACACCCCA CCATCAAGCAGCTGATGATGGACCGGGGCGAATTCCAACAAGATTCAGTCCTGAAGCAGC TGGAGGTGCTCACCAGAACCAGAGGCCTCCTGATGCTCTAGACGGTCCTGAGAAGCAAAG CATCAGTCAAGACGTGCTTCTCCC |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 388-585, - strand, RNAz p=0.999116 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 388-585, - strand, RNAz p=0.999116 |
| Aligned organism(s): 39 entry(ies) | More info |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
| 30-245, gnl|bosTau2|chr3 (5179401-5179187) | |
| 30-245, gnl|canFam2|chr5 (11113434-11113224) | |
| 30-245, gnl|danRer3|chr11 (10804993-10804784) | |
| 30-245, gnl|dasNov1|scaffold_13532 (11505-11709) | |
| 30-245, gnl|echTel1|scaffold_228549 (11489-11285) | |
| 30-245, gnl|fr1|chrUn (9914804-9915013) | |
| 30-245, gnl|galGal2|chr24 (456735-456944) | |
| 30-245, gnl|Hg17|chr1 (154874207-154874421) | |
| 30-245, gnl|hg17|chr11 (125811909-125812118) | |
| 30-245, gnl|loxAfr1|scaffold_30651 (19813-19608) | |
| 30-245, gnl|Mm7|chr3 (87199447-87199232) | |
| 30-245, gnl|mm7|chr9 (34918463-34918254) | |
| 30-245, gnl|monDom2|scaffold_15 (13394576-13394786) | |
| 30-245, gnl|oryCun1|scaffold_183834 (8647-8856) | |
| 30-245, gnl|panTro1|chr9 (127896307-127896516) | |
| 30-245, gnl|rheMac2|chr14 (124584227-124584436) | |
| 30-245, gnl|rn3|chr8 (34831951-34831742) | |
| 30-245, gnl|tetNig1|chrUn_random (13887110-13887319) | |
| 30-245, gnl|xenTro1|scaffold_1160 (168015-167810) | |
| 277-387, gnl|bosTau2|chr29 (21801008-21800898) | |
| 277-387, gnl|canFam2|chr5 (11118489-11118365) | |
| 277-387, gnl|danRer3|chr11 (10808494-10808370) | |
| 277-387, gnl|dasNov1|scaffold_86806 (11105-11229) | |
| 277-387, gnl|echTel1|scaffold_307103 (11555-11679) | |
| 277-387, gnl|fr1|chrUn (9913738-9913862) | |
| 277-387, gnl|galGal2|chr24 (454091-454215) | |
| 277-387, gnl|hg17|chr11 (125806520-125806644) | |
| 277-387, gnl|Hg17|chr11 (125806634-125806524) | |
| 277-387, gnl|loxAfr1|scaffold_30651 (24938-24814) | |
| 277-387, gnl|mm7|chr9 (34923247-34923123) | |
| 277-387, gnl|Mm7|chr9 (34923131-34923241) | |
| 277-387, gnl|monDom2|scaffold_15 (13389051-13389175) | |
| 277-387, gnl|oryCun1|scaffold_183834 (3945-4069) | |
| 277-387, gnl|panTro1|chr9 (127890895-127891019) | |
| 277-387, gnl|rheMac2|chr14 (124578778-124578902) | |
| 277-387, gnl|rn3|chr8 (34836766-34836642) | |
| 277-387, gnl|tetNig1|chrUn_random (13885964-13886088) | |
| 388-623, gnl|bosTau2|chr29 (21799454-21799222) | |
| 388-623, gnl|Hg17|chr11 (125804393-125804163) |
| Aligned organism(s): 39 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 30-245, gnl|bosTau2|chr3 (5179401-5179187) | |
| 30-245, gnl|canFam2|chr5 (11113434-11113224) | |
| 30-245, gnl|danRer3|chr11 (10804993-10804784) | |
| 30-245, gnl|dasNov1|scaffold_13532 (11505-11709) | |
| 30-245, gnl|echTel1|scaffold_228549 (11489-11285) | |
| 30-245, gnl|fr1|chrUn (9914804-9915013) | |
| 30-245, gnl|galGal2|chr24 (456735-456944) | |
| 30-245, gnl|Hg17|chr1 (154874207-154874421) | |
| 30-245, gnl|hg17|chr11 (125811909-125812118) | |
| 30-245, gnl|loxAfr1|scaffold_30651 (19813-19608) | |
| 30-245, gnl|Mm7|chr3 (87199447-87199232) | |
| 30-245, gnl|mm7|chr9 (34918463-34918254) | |
| 30-245, gnl|monDom2|scaffold_15 (13394576-13394786) | |
| 30-245, gnl|oryCun1|scaffold_183834 (8647-8856) | |
| 30-245, gnl|panTro1|chr9 (127896307-127896516) | |
| 30-245, gnl|rheMac2|chr14 (124584227-124584436) | |
| 30-245, gnl|rn3|chr8 (34831951-34831742) | |
| 30-245, gnl|tetNig1|chrUn_random (13887110-13887319) | |
| 30-245, gnl|xenTro1|scaffold_1160 (168015-167810) | |
| 277-387, gnl|bosTau2|chr29 (21801008-21800898) | |
| 277-387, gnl|canFam2|chr5 (11118489-11118365) | |
| 277-387, gnl|danRer3|chr11 (10808494-10808370) | |
| 277-387, gnl|dasNov1|scaffold_86806 (11105-11229) | |
| 277-387, gnl|echTel1|scaffold_307103 (11555-11679) | |
| 277-387, gnl|fr1|chrUn (9913738-9913862) | |
| 277-387, gnl|galGal2|chr24 (454091-454215) | |
| 277-387, gnl|hg17|chr11 (125806520-125806644) | |
| 277-387, gnl|Hg17|chr11 (125806634-125806524) | |
| 277-387, gnl|loxAfr1|scaffold_30651 (24938-24814) | |
| 277-387, gnl|mm7|chr9 (34923247-34923123) | |
| 277-387, gnl|Mm7|chr9 (34923131-34923241) | |
| 277-387, gnl|monDom2|scaffold_15 (13389051-13389175) | |
| 277-387, gnl|oryCun1|scaffold_183834 (3945-4069) | |
| 277-387, gnl|panTro1|chr9 (127890895-127891019) | |
| 277-387, gnl|rheMac2|chr14 (124578778-124578902) | |
| 277-387, gnl|rn3|chr8 (34836766-34836642) | |
| 277-387, gnl|tetNig1|chrUn_random (13885964-13886088) | |
| 388-623, gnl|bosTau2|chr29 (21799454-21799222) | |
| 388-623, gnl|Hg17|chr11 (125804393-125804163) |