Ss1.1-Pig2-124N13.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| CAGCCTGCCAGCCTGGCACTTGGAGCCCCTGTGCAACCAGGGCTCCTCCTGCCTTTCCTG CTCCACCAGCAGCTCTCCATACGCAACCCCCAGCCACTGCAGCTGTGTCCCCGACCGGTT GCCCCTCAGGCTGCTGTGTGAGAGCATGAAGAGGCAGATCGTGTCCCGGGCCTTCTATGG CTGGCTGGCATACTGCCGCCACCTGTCCACGGTGCGGACCCACCTGTCAGCGCTGGTACA TCACAACATCATCCCGCCCGCCCGGCCCCCAGGGGCCTCAGGGGGCCTCACCAAGGATGT TTGGAGCAAGTATCAAAAGGACGAAAAGAACTACAAGGAACTGGAGCTGCTGCGGCAAGT TTACTATGGAGGCGTGGAGCATGAGATTCGCAAGGACGTCTGGCCCTTTCTGCTTGGCCA CTACAAGTTTGGCATGAGCAAGAAGGAGATGGAGCAGGTGGACACAGTGGTGGCAGCGAG GTACCAGCAGGTGTTGGCGGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCGGGAGCG GGAGGCTCACCCAGCCACACTCACCAAGTTCTCCTCGGGCAGCAGCATTGACAGCCATGT TCAGCGCCTCGTCCACCGAGATTCCACCATCAGCAATGACGTGAGCCCAACGGGACCTGG GGGCTGGGGACGGGGCCACCAGCACTGCAGGCCTGCCTGCTCGTGCTCACTGGCAGTGGA GCCCTGGAGAAGGACTTAATATGTCTGTACCTCGTTTTCTTCCACTGAAAAATGGCATGA GGGTCCCCTGCTGCCCACTTCTTT |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| CAGCCTGCCAGCCTGGCACTTGGAGCCCCTGTGCAACCAGGGCTCCTCCTGCCTTTCCTG CTCCACCAGCAGCTCTCCATACGCAACCCCCAGCCACTGCAGCTGTGTCCCCGACCGGTT GCCCCTCAGGCTGCTGTGTGAGAGCATGAAGAGGCAGATCGTGTCCCGGGCCTTCTATGG CTGGCTGGCATACTGCCGCCACCTGTCCACGGTGCGGACCCACCTGTCAGCGCTGGTACA TCACAACATCATCCCGCCCGCCCGGCCCCCAGGGGCCTCAGGGGGCCTCACCAAGGATGT TTGGAGCAAGTATCAAAAGGACGAAAAGAACTACAAGGAACTGGAGCTGCTGCGGCAAGT TTACTATGGAGGCGTGGAGCATGAGATTCGCAAGGACGTCTGGCCCTTTCTGCTTGGCCA CTACAAGTTTGGCATGAGCAAGAAGGAGATGGAGCAGGTGGACACAGTGGTGGCAGCGAG GTACCAGCAGGTGTTGGCGGAGTGGAAGGCCTGCGAGGTGGTGGTGAGGCAGCGGGAGCG GGAGGCTCACCCAGCCACACTCACCAAGTTCTCCTCGGGCAGCAGCATTGACAGCCATGT TCAGCGCCTCGTCCACCGAGATTCCACCATCAGCAATGACGTGAGCCCAACGGGACCTGG GGGCTGGGGACGGGGCCACCAGCACTGCAGGCCTGCCTGCTCGTGCTCACTGGCAGTGGA GCCCTGGAGAAGGACTTAATATGTCTGTACCTCGTTTTCTTCCACTGAAAAATGGCATGA GGGTCCCCTGCTGCCCACTTCTTT |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 5-119, - strand, RNAz p=0.713853 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 5-119, - strand, RNAz p=0.713853 |
| Aligned organism(s): 23 entry(ies) | More info |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
| 1-119, gnl|bosTau2|chr19 (17872296-17872414) | |
| 1-119, gnl|canFam2|chr9 (49782695-49782836) | |
| 1-119, gnl|danRer3|chr15 (8504242-8504104) | |
| 1-119, gnl|dasNov1|scaffold_2621 (51217-51357) | |
| 1-119, gnl|fr1|chrUn (256415565-256415699) | |
| 1-119, gnl|galGal2|chr19 (8888505-8888628) | |
| 1-119, gnl|hg17|chr17 (2221279-2221420) | |
| 1-119, gnl|Hg17|chr17 (2221343-2221461) | |
| 1-119, gnl|loxAfr1|scaffold_23622 (15216-15357) | |
| 1-119, gnl|mm7|chr11 (74941501-74941361) | |
| 1-119, gnl|Mm7|chr11 (74941436-74941318) | |
| 1-119, gnl|monDom2|scaffold_86 (3526857-3526995) | |
| 1-119, gnl|oryCun1|scaffold_209496 (39845-39707) | |
| 1-119, gnl|panTro1|chr19 (2402974-2403115) | |
| 1-119, gnl|rn3|chr10 (62189730-62189590) | |
| 1-119, gnl|tetNig1|chr16 (8332951-8333062) | |
| 1-119, gnl|xenTro1|scaffold_281 (1263548-1263429) | |
| 183-328, gnl|bosTau2|chr19 (17873379-17873524) | |
| 183-328, gnl|Hg17|chr17 (2222387-2222532) | |
| 183-328, gnl|Mm7|chr11 (74940348-74940203) | |
| 455-644, gnl|bosTau2|chr17 (39669365-39669554) | |
| 455-644, gnl|Hg17|chr22 (23613949-23614138) | |
| 455-644, gnl|Mm7|chr5 (112454325-112454136) |
| Aligned organism(s): 23 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 1-119, gnl|bosTau2|chr19 (17872296-17872414) | |
| 1-119, gnl|canFam2|chr9 (49782695-49782836) | |
| 1-119, gnl|danRer3|chr15 (8504242-8504104) | |
| 1-119, gnl|dasNov1|scaffold_2621 (51217-51357) | |
| 1-119, gnl|fr1|chrUn (256415565-256415699) | |
| 1-119, gnl|galGal2|chr19 (8888505-8888628) | |
| 1-119, gnl|hg17|chr17 (2221279-2221420) | |
| 1-119, gnl|Hg17|chr17 (2221343-2221461) | |
| 1-119, gnl|loxAfr1|scaffold_23622 (15216-15357) | |
| 1-119, gnl|mm7|chr11 (74941501-74941361) | |
| 1-119, gnl|Mm7|chr11 (74941436-74941318) | |
| 1-119, gnl|monDom2|scaffold_86 (3526857-3526995) | |
| 1-119, gnl|oryCun1|scaffold_209496 (39845-39707) | |
| 1-119, gnl|panTro1|chr19 (2402974-2403115) | |
| 1-119, gnl|rn3|chr10 (62189730-62189590) | |
| 1-119, gnl|tetNig1|chr16 (8332951-8333062) | |
| 1-119, gnl|xenTro1|scaffold_281 (1263548-1263429) | |
| 183-328, gnl|bosTau2|chr19 (17873379-17873524) | |
| 183-328, gnl|Hg17|chr17 (2222387-2222532) | |
| 183-328, gnl|Mm7|chr11 (74940348-74940203) | |
| 455-644, gnl|bosTau2|chr17 (39669365-39669554) | |
| 455-644, gnl|Hg17|chr22 (23613949-23614138) | |
| 455-644, gnl|Mm7|chr5 (112454325-112454136) |