Ss1.1-Pig2-126B10.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| GCATGCAGCAGCTGGCCACCTGCTCCAGCAGCTCACGCCGCGACTCTTCCGACAGGTCTG CGCAGTCCTTGGCCACGGTCATCTTCTCCGCCATCTCCTCTGTGATGGTCAAGTTCTGCT CCAGGCAGAGCTGCAGGGCTTCCTGATACTTCCTGGCAGCCAGCAGCAGCTCCACCGCCT TCTCGTACTGCTGGTGCTCCAGGAAGAAGTCAGAGCAGCGGGTCAGGAGAGCGGGGTCTG ACTTCTCATCCAGGTCCTCGGCCACGAGCTGCAGGGCCACAAACTGCTGCGTGGCGAAGG CCAGCTCCAGGGCCTTGGAGAGGTGGCCGGCCTTGTGGTACAGCACGACCGCCCGGTCCG CCTGCTCGCCCTTTTCCTCGTAGTAGCGCGCCGCCTCGATCATGTCCTCAGGGGAGCTCA GCAGGGCCAAGTTCATGAGCTGGTCGTCCAGGCCATGCTCCTTGCACAGGCGGATGGCGT TGTTGAAGGCCTGTGCGCGCGTGTAGAAGTGCACAGCCTGCCCCACCTCCTCCTGGCTCT CGTATTGCCGGGCCAGGTGGTACGAGGCCGCCCAGTTGCCGGTCTCGCTGGCTATCTCAG CAGCCTTCTGGATGTTGCCCTGGAAGCAGTGAATGCGGACCAGGGAGAAGTAGTCCTGCG CCAGCCCATAGTAGTGCAGCGCGG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| GCATGCAGCAGCTGGCCACCTGCTCCAGCAGCTCACGCCGCGACTCTTCCGACAGGTCTG CGCAGTCCTTGGCCACGGTCATCTTCTCCGCCATCTCCTCTGTGATGGTCAAGTTCTGCT CCAGGCAGAGCTGCAGGGCTTCCTGATACTTCCTGGCAGCCAGCAGCAGCTCCACCGCCT TCTCGTACTGCTGGTGCTCCAGGAAGAAGTCAGAGCAGCGGGTCAGGAGAGCGGGGTCTG ACTTCTCATCCAGGTCCTCGGCCACGAGCTGCAGGGCCACAAACTGCTGCGTGGCGAAGG CCAGCTCCAGGGCCTTGGAGAGGTGGCCGGCCTTGTGGTACAGCACGACCGCCCGGTCCG CCTGCTCGCCCTTTTCCTCGTAGTAGCGCGCCGCCTCGATCATGTCCTCAGGGGAGCTCA GCAGGGCCAAGTTCATGAGCTGGTCGTCCAGGCCATGCTCCTTGCACAGGCGGATGGCGT TGTTGAAGGCCTGTGCGCGCGTGTAGAAGTGCACAGCCTGCCCCACCTCCTCCTGGCTCT CGTATTGCCGGGCCAGGTGGTACGAGGCCGCCCAGTTGCCGGTCTCGCTGGCTATCTCAG CAGCCTTCTGGATGTTGCCCTGGAAGCAGTGAATGCGGACCAGGGAGAAGTAGTCCTGCG CCAGCCCATAGTAGTGCAGCGCGG |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 218-337, + strand, RNAz p=0.755333 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 218-337, + strand, RNAz p=0.755333 |
| Aligned organism(s): 30 entry(ies) | More info |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
| 149-344, gnl|bosTau2|chr25 (2747986-2747793) | |
| 149-344, gnl|canFam2|chr6 (42339359-42339152) | |
| 149-344, gnl|danRer3|chr24 (30573199-30573399) | |
| 149-344, gnl|fr1|chrUn (22065462-22065666) | |
| 149-344, gnl|galGal2|chr14 (20453531-20453738) | |
| 149-344, gnl|hg17|chr16 (1513510-1513719) | |
| 149-344, gnl|Hg17|chr16 (1513520-1513714) | |
| 149-344, gnl|loxAfr1|scaffold_136805 (1147-1349) | |
| 149-344, gnl|mm7|chr17 (23274179-23273969) | |
| 149-344, gnl|Mm7|chr17 (23274167-23273974) | |
| 149-344, gnl|monDom2|scaffold_5 (122477296-122477089) | |
| 149-344, gnl|panTro1|chr18 (1587199-1587408) | |
| 149-344, gnl|rheMac2|chr20 (1512597-1512805) | |
| 149-344, gnl|rn3|chr10 (14340493-14340283) | |
| 149-344, gnl|tetNig1|chr2 (4892880-4892680) | |
| 149-344, gnl|xenTro1|scaffold_12 (3534861-3535070) | |
| 460-606, gnl|bosTau2|chr25 (2747515-2747369) | |
| 460-606, gnl|canFam2|chr6 (42338050-42337894) | |
| 460-606, gnl|danRer3|chr24 (30573592-30573751) | |
| 460-606, gnl|fr1|chrUn (22065994-22066153) | |
| 460-606, gnl|galGal2|chr14 (20454451-20454605) | |
| 460-606, gnl|hg17|chr16 (1514549-1514713) | |
| 460-606, gnl|Hg17|chr16 (1514553-1514699) | |
| 460-606, gnl|mm7|chr17 (23272637-23272476) | |
| 460-606, gnl|Mm7|chr17 (23272634-23272488) | |
| 460-606, gnl|monDom2|scaffold_5 (122474951-122474795) | |
| 460-606, gnl|panTro1|chr18 (1588238-1588402) | |
| 460-606, gnl|rn3|chr10 (14339160-14338988) | |
| 460-606, gnl|tetNig1|chr2 (4892358-4892195) | |
| 460-606, gnl|xenTro1|scaffold_12 (3537951-3538127) |
| Aligned organism(s): 30 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 149-344, gnl|bosTau2|chr25 (2747986-2747793) | |
| 149-344, gnl|canFam2|chr6 (42339359-42339152) | |
| 149-344, gnl|danRer3|chr24 (30573199-30573399) | |
| 149-344, gnl|fr1|chrUn (22065462-22065666) | |
| 149-344, gnl|galGal2|chr14 (20453531-20453738) | |
| 149-344, gnl|hg17|chr16 (1513510-1513719) | |
| 149-344, gnl|Hg17|chr16 (1513520-1513714) | |
| 149-344, gnl|loxAfr1|scaffold_136805 (1147-1349) | |
| 149-344, gnl|mm7|chr17 (23274179-23273969) | |
| 149-344, gnl|Mm7|chr17 (23274167-23273974) | |
| 149-344, gnl|monDom2|scaffold_5 (122477296-122477089) | |
| 149-344, gnl|panTro1|chr18 (1587199-1587408) | |
| 149-344, gnl|rheMac2|chr20 (1512597-1512805) | |
| 149-344, gnl|rn3|chr10 (14340493-14340283) | |
| 149-344, gnl|tetNig1|chr2 (4892880-4892680) | |
| 149-344, gnl|xenTro1|scaffold_12 (3534861-3535070) | |
| 460-606, gnl|bosTau2|chr25 (2747515-2747369) | |
| 460-606, gnl|canFam2|chr6 (42338050-42337894) | |
| 460-606, gnl|danRer3|chr24 (30573592-30573751) | |
| 460-606, gnl|fr1|chrUn (22065994-22066153) | |
| 460-606, gnl|galGal2|chr14 (20454451-20454605) | |
| 460-606, gnl|hg17|chr16 (1514549-1514713) | |
| 460-606, gnl|Hg17|chr16 (1514553-1514699) | |
| 460-606, gnl|mm7|chr17 (23272637-23272476) | |
| 460-606, gnl|Mm7|chr17 (23272634-23272488) | |
| 460-606, gnl|monDom2|scaffold_5 (122474951-122474795) | |
| 460-606, gnl|panTro1|chr18 (1588238-1588402) | |
| 460-606, gnl|rn3|chr10 (14339160-14338988) | |
| 460-606, gnl|tetNig1|chr2 (4892358-4892195) | |
| 460-606, gnl|xenTro1|scaffold_12 (3537951-3538127) |