Ss1.1-Pig2-126D18.5
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GAGGACCTGGGCGTGTACACCTGCAGTGTGAGCAACGCACTGGGGACAGCGACCACCACA
GCCATCCTCCAGAAGCAGAGCGTCCCTCCTCCTCCCCACGCCCGGACATTGGTGAAGTCT
ATGCTGATGGGGTGCTGCTGGTCTGGAAGCCTGTGGAGTCATGTGGCCCTGTGACCTATA
TTGTGCAGTGCAGCCTGGAAGGCGGCAGCTGGAGCACATTGGCCTCAGACATCTTTGACT
GCTGCTACCTCACTGGCAAGCTTTCTCGGGGTGGGGTATACACCTTCCGGACGGCCTGTG
TCAGCAAGGCGGGCATAGGCCCCTACAGCAGCCCCTCGGAGCAGATCCTCTTGGGAGGAC
CCAGGCACCTGGGGGCCGCTTCAGTGTGGTGAGGCAGTGCCGGGAGAAGGCCAGTGGGCG
CGTGCTGGCTGCCAAGATCGTGCCCTACCACCCTGAGAACAGGACTGCCGTGCTTCGAGA
ATATGAGGCCCTCAAGGGCTTGCGCCACCCTCACCTGGCACAGTTGCAGGCTGCCTACCT
CAGCCCCCGGCACCTGGTCCTCATCTTGGAGTTGTG
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GAGGACCTGGGCGTGTACACCTGCAGTGTGAGCAACGCACTGGGGACAGCGACCACCACA
GCCATCCTCCAGAAGCAGAGCGTCCCTCCTCCTCCCCACGCCCGGACATTGGTGAAGTCT
ATGCTGATGGGGTGCTGCTGGTCTGGAAGCCTGTGGAGTCATGTGGCCCTGTGACCTATA
TTGTGCAGTGCAGCCTGGAAGGCGGCAGCTGGAGCACATTGGCCTCAGACATCTTTGACT
GCTGCTACCTCACTGGCAAGCTTTCTCGGGGTGGGGTATACACCTTCCGGACGGCCTGTG
TCAGCAAGGCGGGCATAGGCCCCTACAGCAGCCCCTCGGAGCAGATCCTCTTGGGAGGAC
CCAGGCACCTGGGGGCCGCTTCAGTGTGGTGAGGCAGTGCCGGGAGAAGGCCAGTGGGCG
CGTGCTGGCTGCCAAGATCGTGCCCTACCACCCTGAGAACAGGACTGCCGTGCTTCGAGA
ATATGAGGCCCTCAAGGGCTTGCGCCACCCTCACCTGGCACAGTTGCAGGCTGCCTACCT
CAGCCCCCGGCACCTGGTCCTCATCTTGGAGTTGTG
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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
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200-373, gnl|bosTau2|chr7 (884233-884406) |
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200-373, gnl|canFam2|chr14 (3615184-3615053) |
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200-373, gnl|dasNov1|scaffold_109838 (184-317) |
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200-373, gnl|echTel1|scaffold_298972 (3473-3340) |
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200-373, gnl|fr1|chrUn (265045282-265045167) |
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200-373, gnl|galGal2|chr2 (1646068-1645935) |
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200-373, gnl|hg17|chr1 (224870441-224870574) |
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200-373, gnl|Hg17|chr1 (224870442-224870615) |
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200-373, gnl|loxAfr1|scaffold_199286 (673-540) |
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200-373, gnl|mm7|chr11 (59078566-59078433) |
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200-373, gnl|Mm7|chr11 (59078563-59078390) |
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200-373, gnl|monDom2|scaffold_5 (78746462-78746329) |
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200-373, gnl|oryCun1|scaffold_197608 (5530-5664) |
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200-373, gnl|panTro1|chr1 (208663366-208663499) |
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200-373, gnl|rheMac2|chr1 (142010429-142010296) |
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200-373, gnl|rn3|chr10 (45303322-45303189) |
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200-373, gnl|tetNig1|chr1 (11700170-11700037) |
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200-373, gnl|xenTro1|scaffold_451 (674189-674322) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
200-373, gnl|bosTau2|chr7 (884233-884406) |
|
200-373, gnl|canFam2|chr14 (3615184-3615053) |
|
200-373, gnl|dasNov1|scaffold_109838 (184-317) |
|
200-373, gnl|echTel1|scaffold_298972 (3473-3340) |
|
200-373, gnl|fr1|chrUn (265045282-265045167) |
|
200-373, gnl|galGal2|chr2 (1646068-1645935) |
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200-373, gnl|hg17|chr1 (224870441-224870574) |
|
200-373, gnl|Hg17|chr1 (224870442-224870615) |
|
200-373, gnl|loxAfr1|scaffold_199286 (673-540) |
|
200-373, gnl|mm7|chr11 (59078566-59078433) |
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200-373, gnl|Mm7|chr11 (59078563-59078390) |
|
200-373, gnl|monDom2|scaffold_5 (78746462-78746329) |
|
200-373, gnl|oryCun1|scaffold_197608 (5530-5664) |
|
200-373, gnl|panTro1|chr1 (208663366-208663499) |
|
200-373, gnl|rheMac2|chr1 (142010429-142010296) |
|
200-373, gnl|rn3|chr10 (45303322-45303189) |
|
200-373, gnl|tetNig1|chr1 (11700170-11700037) |
|
200-373, gnl|xenTro1|scaffold_451 (674189-674322) |
