Non-Coding RNA Search

Ss1.1-Pig2-126J21.5

Sequence:


               
               AAACATTGCAGAAAGACGTACCCTTCTTCCGAAGAGGATTCCCCCATTTCTCTTGGAGGC
TGCAAGAGGATAAGTCACGTGGCCAGGCCCAGCATCGATGTGTGAGGAATCGACCCAAGA
CTGTGAATATCAGAAGGCTTAGGTTCTTGGAGGCCACCCACTGTGATGACCACACTGGTG
TGCTCTGATCTCCTACCACTGCAGAAACTATTCTGTCCTGAGGCAAGGAGAAAAAGCCTC
TTTTTAGGCTTCTCTCTCCTTCGGAAGAAATTACCATTCGCAATTAATCCAATCAAGGAT
GCATTGTCCCAGCAGAGGTCCCACCAGTGGATCATCAGAGGACCTCTGAGAGGTGCAGCT
GCACGGGCCGTCCAGAGGCAGGGTCGGCTGGCAGCTCTGCGGCGAATGGTATTTGCAGTT
TCTATCACATCCTGATCCTGGCTCTCACCATATAAATTGTCCCAGATGTGCACTTCGGAG
TGTGGCGTTTTATTTTTATTTGCTTTCATTTTTTAAGCATAGGCTGAACTTTGAGTTGTG

Sequence:

Distiller database | Help | Less info

Blue-coloured subsequences are predicted RNA structures by RNAz


               
               AAACATTGCAGAAAGACGTACCCTTCTTCCGAAGAGGATTCCCCCATTTCTCTTGGAGGC
TGCAAGAGGATAAGTCACGTGGCCAGGCCCAGCATCGATGTGTGAGGAATCGACCCAAGA
CTGTGAATATCAGAAGGCTTAGGTTCTTGGAGGCCACCCACTGTGATGACCACACTGGTG
TGCTCTGATCTCCTACCACTGCAGAAACTATTCTGTCCTGAGGCAAGGAGAAAAAGCCTC
TTTTTAGGCTTCTCTCTCCTTCGGAAGAAATTACCATTCGCAATTAATCCAATCAAGGAT
GCATTGTCCCAGCAGAGGTCCCACCAGTGGATCATCAGAGGACCTCTGAGAGGTGCAGCT
GCACGGGCCGTCCAGAGGCAGGGTCGGCTGGCAGCTCTGCGGCGAATGGTATTTGCAGTT
TCTATCACATCCTGATCCTGGCTCTCACCATATAAATTGTCCCAGATGTGCACTTCGGAG
TGTGGCGTTTTATTTTTATTTGCTTTCATTTTTTAAGCATAGGCTGAACTTTGAGTTGTG

Predicted RNA structure(s): 1 entry(ies)

More info

Predicted RNA structure(s): 1 entry(ies)

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               191-425, + strand, RNAz p=0.986361

Predicted RNA structure(s): 1 entry(ies)

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PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz


               
               191-425, + strand, RNAz p=0.986361

Aligned organism(s): 2 entry(ies)

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Aligned organism(s): 2 entry(ies)

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               73-539, gnl|bosTau2|chr23 (37243885-37244347)
               

               
               73-539, gnl|Hg17|chr6 (15004863-15004392)

Aligned organism(s): 2 entry(ies)

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PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map


               
               73-539, gnl|bosTau2|chr23 (37243885-37244347)
               

               
               73-539, gnl|Hg17|chr6 (15004863-15004392)

	73-539, gnl\|bosTau2\|chr23 (37243885-37244347)
	73-539, gnl\|Hg17\|chr6 (15004863-15004392)