Ss1.1-Pig2-127M07.5
|
GTCCGCCCTTGGTGGCCACCCAGGCGCCTTTGCCTGGTACAGCTGCTGACTTCTGGCTCA
TGGTGCACGAGCAGAAAGTGTCAGTCATTGTCATGCTGGTGTCTGAGGCCGAGATGGAGA
AGCAAAAGGTGGCACGCTACTTCCCTACAGAGAGGGGCCAGCCCATGGTGCATGGAGCCC
TGAGCCTGGCCCTGAGCAGTGTCCGCACCACAGAGACCCACGTGGAGCGGGTGCTAAGCC
TTCAGTTCCGTGACCAGAGCCTCAAGCGCTCGCTTGTGCACCTCCACTTTCCTACTTGGC
CAGAGTTAGGCCTGCCTGACAGTCCTGGCAACCTGCTCCGCTTCATCCAGGAGGTGCATG
CTCATTACCTGCACCAGCGCCCCCTGCACACGCCCATCGTTGTGCACTGCAGCTCCGGGG
TGGGCCGCACAGGAGCCTTTGCACTGCTCTACGCGGCTGTGCAGGAGGTTGAGGCTGGAA
ACGGGATCCCTGAGCTGCCTCAGCTGGTGCGGCGCA
|
Blue-coloured subsequences are predicted RNA structures by RNAz
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GTCCGCCCTTGGTGGCCACCCAGGCGCCTTTGCCTGGTACAGCTGCTGACTTCTGGCTCA
TGGTGCACGAGCAGAAAGTGTCAGTCATTGTCATGCTGGTGTCTGAGGCCGAGATGGAGA
AGCAAAAGGTGGCACGCTACTTCCCTACAGAGAGGGGCCAGCCCATGGTGCATGGAGCCC
TGAGCCTGGCCCTGAGCAGTGTCCGCACCACAGAGACCCACGTGGAGCGGGTGCTAAGCC
TTCAGTTCCGTGACCAGAGCCTCAAGCGCTCGCTTGTGCACCTCCACTTTCCTACTTGGC
CAGAGTTAGGCCTGCCTGACAGTCCTGGCAACCTGCTCCGCTTCATCCAGGAGGTGCATG
CTCATTACCTGCACCAGCGCCCCCTGCACACGCCCATCGTTGTGCACTGCAGCTCCGGGG
TGGGCCGCACAGGAGCCTTTGCACTGCTCTACGCGGCTGTGCAGGAGGTTGAGGCTGGAA
ACGGGATCCCTGAGCTGCCTCAGCTGGTGCGGCGCA
|
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gi|5738158|gb|AAD50276.1| |
Protein identifier
|
gi|5738158|gb|AAD50276.1| |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
|
121-328, gnl|bosTau2|chr22 (40304835-40305043) |
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121-328, gnl|Hg17|chr3 (47428275-47428479) |
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121-328, gnl|Mm7|chr9 (110084686-110084482) |
| |
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411-516, gnl|bosTau2|chr22 (40305280-40305385) |
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411-516, gnl|danRer3|chr16 (38910671-38910847) |
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411-516, gnl|dasNov1|scaffold_214068 (1330-1499) |
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411-516, gnl|fr1|chrUn (149541590-149541772) |
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411-516, gnl|hg17|chr3 (47428757-47428940) |
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411-516, gnl|Hg17|chr3 (47428775-47428880) |
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411-516, gnl|loxAfr1|scaffold_14678 (392-212) |
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411-516, gnl|mm7|chr9 (110084216-110084045) |
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411-516, gnl|Mm7|chr9 (110084204-110084099) |
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411-516, gnl|monDom2|scaffold_5 (82117721-82117915) |
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411-516, gnl|panTro1|chr2 (48891133-48891308) |
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411-516, gnl|rheMac2|chr2 (89109725-89109542) |
|
411-516, gnl|rn3|chr8 (114782007-114781836) |
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411-516, gnl|xenTro1|scaffold_1118 (123253-123057) |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
|
121-328, gnl|bosTau2|chr22 (40304835-40305043) |
|
121-328, gnl|Hg17|chr3 (47428275-47428479) |
|
121-328, gnl|Mm7|chr9 (110084686-110084482) |
| |
|
411-516, gnl|bosTau2|chr22 (40305280-40305385) |
|
411-516, gnl|danRer3|chr16 (38910671-38910847) |
|
411-516, gnl|dasNov1|scaffold_214068 (1330-1499) |
|
411-516, gnl|fr1|chrUn (149541590-149541772) |
|
411-516, gnl|hg17|chr3 (47428757-47428940) |
|
411-516, gnl|Hg17|chr3 (47428775-47428880) |
|
411-516, gnl|loxAfr1|scaffold_14678 (392-212) |
|
411-516, gnl|mm7|chr9 (110084216-110084045) |
|
411-516, gnl|Mm7|chr9 (110084204-110084099) |
|
411-516, gnl|monDom2|scaffold_5 (82117721-82117915) |
|
411-516, gnl|panTro1|chr2 (48891133-48891308) |
|
411-516, gnl|rheMac2|chr2 (89109725-89109542) |
|
411-516, gnl|rn3|chr8 (114782007-114781836) |
|
411-516, gnl|xenTro1|scaffold_1118 (123253-123057) |
