Ss1.1-Pig2-127M21.5
| Sequence: | Distiller database | More info |
| Sequence: | Distiller database | Help | Less info |
| ACAGTGAAGGCCTGGGGCCATGCCGTCCCCTCTCCACTAGATCTCCTGACCTGACCTGGT GCTTCCCGTGTGGCCCTGTATGGTGTGGTGTCTCCTCCTGAGCACTGTGTGTAATAAACA CCTCTTTCTAAGCAGGTGCCTCAATCTCTATCATCCTACTGTACCTGACTGAGACAAGAT CCTGAGCGCATTTGAAAACAGGCTGTGCCTCCCCACGAGGGCTGCATACCCTCTGCTGGT GCACGGGCAGTCTCACAGAAACCCCCGGCTGGTCCTCACCTCCCTCTTGGCTTTCCGGAG GAACATCTCATCGGTGCAACGGAAGGCTGCTCGGAGAGCCGCTGCAGGGTCTGTGGGCAA CTCCGGCTGGCGGGCAGCATTGGCATGCACATGCACACTTGCATACCTCGCGGCGTCCAC CCCACCATGCCCGTCAAACACAGCAAAGTAGGCGCGGTCCACAGAGTCTGACAGGCCAAA GAGCTGGTTGAAGGCGGGGAGACACACATGTCGGTCCTCCATCCTGCGGCGGGCATTGCG GACGGCGTGGACAGAAACCAGCCACGGCCGCTGCAGAACCTGGGCCTCCACAGGCTCATG CTCCTGCACCTGCTGCTGGCTGCACACTTCCCACAGCTGGTTGAAGAGGCTCCGCGCCAG GCCTGCAGCATCCAGCAAGGTCACGGGGGCCTTCTCCTCCTCATCACCATCCTCATCCTC CTGCTTCAGCAACTTCCTAAACTCAGAAAGGTCCATCTGTAGCAGCCGGGAAACAGCCTC GTGGGCCAGACTTGCCGCAAGCAGTGGTGGAGCGTTCCTGCTGCCCAGGAGGCCCATCGC CAGCTCGGCCAGCTCGCCCTCCACCTCCTCCTGGCTCAGCACCACGCCTGGGACCTTCCA CGGCAAAGGGCTGTCTGGACTCAGCGGGGCTGGGAAGTCGTGGAGGAACACGTCCAGGAA GCTGGGGATCTCCTCTGCCGTCTGGCTGTCCTGCTGTGAGGCTCCCGAGGCCATGGCCAG AGCATCCCGGGGGCTGCAGCCAGGCTGGTAGGTCTTCACTCTGCCACTCGGCCACCCGGC GCCCAGCGAGCAGCTCCTTTCCAG |
| Sequence: | Distiller database | Help | Less info |
Blue-coloured subsequences are predicted RNA structures by RNAz
| ACAGTGAAGGCCTGGGGCCATGCCGTCCCCTCTCCACTAGATCTCCTGACCTGACCTGGT GCTTCCCGTGTGGCCCTGTATGGTGTGGTGTCTCCTCCTGAGCACTGTGTGTAATAAACA CCTCTTTCTAAGCAGGTGCCTCAATCTCTATCATCCTACTGTACCTGACTGAGACAAGAT CCTGAGCGCATTTGAAAACAGGCTGTGCCTCCCCACGAGGGCTGCATACCCTCTGCTGGT GCACGGGCAGTCTCACAGAAACCCCCGGCTGGTCCTCACCTCCCTCTTGGCTTTCCGGAG GAACATCTCATCGGTGCAACGGAAGGCTGCTCGGAGAGCCGCTGCAGGGTCTGTGGGCAA CTCCGGCTGGCGGGCAGCATTGGCATGCACATGCACACTTGCATACCTCGCGGCGTCCAC CCCACCATGCCCGTCAAACACAGCAAAGTAGGCGCGGTCCACAGAGTCTGACAGGCCAAA GAGCTGGTTGAAGGCGGGGAGACACACATGTCGGTCCTCCATCCTGCGGCGGGCATTGCG GACGGCGTGGACAGAAACCAGCCACGGCCGCTGCAGAACCTGGGCCTCCACAGGCTCATG CTCCTGCACCTGCTGCTGGCTGCACACTTCCCACAGCTGGTTGAAGAGGCTCCGCGCCAG GCCTGCAGCATCCAGCAAGGTCACGGGGGCCTTCTCCTCCTCATCACCATCCTCATCCTC CTGCTTCAGCAACTTCCTAAACTCAGAAAGGTCCATCTGTAGCAGCCGGGAAACAGCCTC GTGGGCCAGACTTGCCGCAAGCAGTGGTGGAGCGTTCCTGCTGCCCAGGAGGCCCATCGC CAGCTCGGCCAGCTCGCCCTCCACCTCCTCCTGGCTCAGCACCACGCCTGGGACCTTCCA CGGCAAAGGGCTGTCTGGACTCAGCGGGGCTGGGAAGTCGTGGAGGAACACGTCCAGGAA GCTGGGGATCTCCTCTGCCGTCTGGCTGTCCTGCTGTGAGGCTCCCGAGGCCATGGCCAG AGCATCCCGGGGGCTGCAGCCAGGCTGGTAGGTCTTCACTCTGCCACTCGGCCACCCGGC GCCCAGCGAGCAGCTCCTTTCCAG |
| Coded protein: 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | More info |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
| 817-935, - strand, RNAz p=0.95173 |
| Predicted RNA structure(s): 1 entry(ies) | Help | Less info |
PigEST conread start position and end position of the predicted RNA structure by RNAz,
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
PigEST conread reading direction of predicted structure,
ncRNA classificator p of RNAz
| 817-935, - strand, RNAz p=0.95173 |
| Aligned organism(s): 37 entry(ies) | More info |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
| 275-468, gnl|bosTau2|chr17 (45602078-45602271) | |
| 275-468, gnl|canFam2|chr26 (34240009-34240236) | |
| 275-468, gnl|danRer3|chr5 (3478431-3478229) | |
| 275-468, gnl|echTel1|scaffold_87689 (1785-1567) | |
| 275-468, gnl|fr1|chrUn (218137487-218137285) | |
| 275-468, gnl|galGal2|chr15 (461289-461090) | |
| 275-468, gnl|hg17|chr22 (20612285-20612512) | |
| 275-468, gnl|Hg17|chr22 (20612312-20612505) | |
| 275-468, gnl|loxAfr1|scaffold_23985 (13534-13752) | |
| 275-468, gnl|mm7|chr16 (16465022-16464795) | |
| 275-468, gnl|Mm7|chr16 (16464993-16464800) | |
| 275-468, gnl|monDom2|scaffold_214 (669403-669176) | |
| 275-468, gnl|oryCun1|scaffold_167473 (4-203) | |
| 275-468, gnl|panTro1|chr23 (20638790-20639017) | |
| 275-468, gnl|rheMac2|chr10 (65687386-65687613) | |
| 275-468, gnl|rn3|chr11 (86135829-86136056) | |
| 275-468, gnl|tetNig1|chr7 (10129005-10128789) | |
| 472-677, gnl|bosTau2|chr17 (45602665-45602864) | |
| 472-677, gnl|canFam2|chr26 (34240847-34241087) | |
| 472-677, gnl|danRer3|chr5 (3477782-3477561) | |
| 472-677, gnl|echTel1|scaffold_87689 (1203-962) | |
| 472-677, gnl|fr1|chrUn (218137086-218136883) | |
| 472-677, gnl|galGal2|chr15 (460508-460276) | |
| 472-677, gnl|hg17|chr22 (20612945-20613186) | |
| 472-677, gnl|Hg17|chr22 (20612953-20613152) | |
| 472-677, gnl|loxAfr1|scaffold_23985 (14194-14434) | |
| 472-677, gnl|mm7|chr16 (16463882-16463639) | |
| 472-677, gnl|Mm7|chr16 (16463872-16463673) | |
| 472-677, gnl|monDom2|scaffold_214 (667823-667574) | |
| 472-677, gnl|oryCun1|scaffold_167473 (531-772) | |
| 472-677, gnl|panTro1|chr23 (20639449-20639690) | |
| 472-677, gnl|rheMac2|chr10 (65688046-65688287) | |
| 472-677, gnl|rn3|chr11 (86136909-86137152) | |
| 472-677, gnl|tetNig1|chr7 (10128721-10128533) | |
| 817-1034, gnl|bosTau2|chr17 (45609775-45609992) | |
| 817-1034, gnl|Hg17|chr22 (20624768-20624994) | |
| 817-1034, gnl|Mm7|chr16 (16453231-16453004) |
| Aligned organism(s): 37 entry(ies) | Help | Less info |
PigEST conread start position and end position of the aligned locus,
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
aligned organism with chromosome (chromosome position)
closely related Artiodactyla cow is linked to the PigEST - Genome Map
| 275-468, gnl|bosTau2|chr17 (45602078-45602271) | |
| 275-468, gnl|canFam2|chr26 (34240009-34240236) | |
| 275-468, gnl|danRer3|chr5 (3478431-3478229) | |
| 275-468, gnl|echTel1|scaffold_87689 (1785-1567) | |
| 275-468, gnl|fr1|chrUn (218137487-218137285) | |
| 275-468, gnl|galGal2|chr15 (461289-461090) | |
| 275-468, gnl|hg17|chr22 (20612285-20612512) | |
| 275-468, gnl|Hg17|chr22 (20612312-20612505) | |
| 275-468, gnl|loxAfr1|scaffold_23985 (13534-13752) | |
| 275-468, gnl|mm7|chr16 (16465022-16464795) | |
| 275-468, gnl|Mm7|chr16 (16464993-16464800) | |
| 275-468, gnl|monDom2|scaffold_214 (669403-669176) | |
| 275-468, gnl|oryCun1|scaffold_167473 (4-203) | |
| 275-468, gnl|panTro1|chr23 (20638790-20639017) | |
| 275-468, gnl|rheMac2|chr10 (65687386-65687613) | |
| 275-468, gnl|rn3|chr11 (86135829-86136056) | |
| 275-468, gnl|tetNig1|chr7 (10129005-10128789) | |
| 472-677, gnl|bosTau2|chr17 (45602665-45602864) | |
| 472-677, gnl|canFam2|chr26 (34240847-34241087) | |
| 472-677, gnl|danRer3|chr5 (3477782-3477561) | |
| 472-677, gnl|echTel1|scaffold_87689 (1203-962) | |
| 472-677, gnl|fr1|chrUn (218137086-218136883) | |
| 472-677, gnl|galGal2|chr15 (460508-460276) | |
| 472-677, gnl|hg17|chr22 (20612945-20613186) | |
| 472-677, gnl|Hg17|chr22 (20612953-20613152) | |
| 472-677, gnl|loxAfr1|scaffold_23985 (14194-14434) | |
| 472-677, gnl|mm7|chr16 (16463882-16463639) | |
| 472-677, gnl|Mm7|chr16 (16463872-16463673) | |
| 472-677, gnl|monDom2|scaffold_214 (667823-667574) | |
| 472-677, gnl|oryCun1|scaffold_167473 (531-772) | |
| 472-677, gnl|panTro1|chr23 (20639449-20639690) | |
| 472-677, gnl|rheMac2|chr10 (65688046-65688287) | |
| 472-677, gnl|rn3|chr11 (86136909-86137152) | |
| 472-677, gnl|tetNig1|chr7 (10128721-10128533) | |
| 817-1034, gnl|bosTau2|chr17 (45609775-45609992) | |
| 817-1034, gnl|Hg17|chr22 (20624768-20624994) | |
| 817-1034, gnl|Mm7|chr16 (16453231-16453004) |